RNA–Protein interactions for RNA: ENST00000295911.6

CLRN1-201, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-201ENST00000295911 RBM28Q9NW13 759 aaKnown RBP10.71□□□□□ -0.69
CLRN1-201ENST00000295911 ARPP21Q9UBL0 812 aaPredicted RBP10.71□□□□□ -0.69
CLRN1-201ENST00000295911 PCDHA7Q9UN72 937 aa10.71□□□□□ -0.69
CLRN1-201ENST00000295911 MRVI1Q9Y6F6 885 aa10.71□□□□□ -0.69
CLRN1-201ENST00000295911 NAV1Q8NEY1 1877 aa10.71□□□□□ -0.7
CLRN1-201ENST00000295911 TNKSO95271 1327 aa10.7□□□□□ -0.7
CLRN1-201ENST00000295911 PPP6R2O75170 966 aa10.7□□□□□ -0.7
CLRN1-201ENST00000295911 ADCY5O95622 1261 aa10.7□□□□□ -0.7
CLRN1-201ENST00000295911 BAG3O95817 575 aa10.7□□□□□ -0.7
CLRN1-201ENST00000295911 TPM3P06753 285 aa10.7□□□□□ -0.7
CLRN1-201ENST00000295911 XBP1P17861 261 aa10.7□□□□□ -0.7
CLRN1-201ENST00000295911 RXRAP19793 462 aa10.7□□□□□ -0.7
CLRN1-201ENST00000295911 HOXA10P31260 410 aaPredicted RBP10.7□□□□□ -0.7
CLRN1-201ENST00000295911 PDE4BQ07343 736 aa10.7□□□□□ -0.7
CLRN1-201ENST00000295911 SNW1Q13573 536 aaKnown RBP10.7□□□□□ -0.7
CLRN1-201ENST00000295911 SLC39A14Q15043 492 aa10.7□□□□□ -0.7
CLRN1-201ENST00000295911 CCDC144CPQ8IYA2 1237 aa10.7□□□□□ -0.7
CLRN1-201ENST00000295911 CKAP2LQ8IYA6 745 aa10.7□□□□□ -0.7
CLRN1-201ENST00000295911 CRACR2BQ8N4Y2 399 aaPredicted RBP10.7□□□□□ -0.7
CLRN1-201ENST00000295911 ZNF454Q8N9F8 522 aa10.7□□□□□ -0.7
CLRN1-201ENST00000295911 ZNF384Q8TF68 577 aa10.7□□□□□ -0.7
CLRN1-201ENST00000295911 PHKBQ93100 1093 aa10.7□□□□□ -0.7
CLRN1-201ENST00000295911 ANO8Q9HCE9 1232 aaPredicted RBP10.7□□□□□ -0.7
CLRN1-201ENST00000295911 CLIC4Q9Y696 253 aa10.7□□□□□ -0.7
CLRN1-201ENST00000295911 LRRC37AA6NMS7 1700 aa10.69□□□□□ -0.7
CLRN1-201ENST00000295911 USP17L12C9JPN9 530 aa10.69□□□□□ -0.7
CLRN1-201ENST00000295911 USP17L21D6R901 530 aa10.69□□□□□ -0.7
CLRN1-201ENST00000295911 EVI5O60447 810 aa10.69□□□□□ -0.7
CLRN1-201ENST00000295911 RANBP6O60518 1105 aaKnown RBP10.69□□□□□ -0.7
CLRN1-201ENST00000295911 CMA1P23946 247 aa10.69□□□□□ -0.7
CLRN1-201ENST00000295911 AKAP17AQ02040 695 aaKnown RBP10.69□□□□□ -0.7
CLRN1-201ENST00000295911 ANO6Q4KMQ2 910 aa10.69□□□□□ -0.7
CLRN1-201ENST00000295911 CCDC178Q5BJE1 867 aa10.69□□□□□ -0.7
CLRN1-201ENST00000295911 IFIT1BQ5T764 474 aaKnown RBP10.69□□□□□ -0.7
CLRN1-201ENST00000295911 AMOTL1Q8IY63 956 aa10.69□□□□□ -0.7
CLRN1-201ENST00000295911 FMR1NBQ8N0W7 255 aaPredicted RBP10.69□□□□□ -0.7
CLRN1-201ENST00000295911 KCNV2Q8TDN2 545 aa10.69□□□□□ -0.7
CLRN1-201ENST00000295911 CRAMP1Q96RY5 1269 aa10.69□□□□□ -0.7
CLRN1-201ENST00000295911 ZKSCAN3Q9BRR0 538 aa10.69□□□□□ -0.7
CLRN1-201ENST00000295911 MYL10Q9BUA6 226 aa10.69□□□□□ -0.7
CLRN1-201ENST00000295911 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.69□□□□□ -0.7
CLRN1-201ENST00000295911 RNF26Q9BY78 433 aaPredicted RBP10.69□□□□□ -0.7
CLRN1-201ENST00000295911 FTOQ9C0B1 505 aaKnown RBP eCLIP10.69□□□□□ -0.7
CLRN1-201ENST00000295911 FOXP1Q9H334 677 aaPredicted RBP10.69□□□□□ -0.7
CLRN1-201ENST00000295911 DCP1AQ9NPI6 582 aaPredicted RBP10.69□□□□□ -0.7
CLRN1-201ENST00000295911 AATFQ9NY61 560 aaKnown RBP eCLIP10.69□□□□□ -0.7
CLRN1-201ENST00000295911 USP25Q9UHP3 1055 aa10.69□□□□□ -0.7
CLRN1-201ENST00000295911 ZKSCAN5Q9Y2L8 839 aa10.69□□□□□ -0.7
CLRN1-201ENST00000295911 MYH1P12882 1939 aa10.68□□□□□ -0.7
CLRN1-201ENST00000295911 GOLGA6L6A8MZA4 724 aa10.68□□□□□ -0.7
CLRN1-201ENST00000295911 KIF28PB7ZC32 967 aa10.68□□□□□ -0.7
CLRN1-201ENST00000295911 DDAH1O94760 285 aa10.68□□□□□ -0.7
CLRN1-201ENST00000295911 MMP1P03956 469 aa10.68□□□□□ -0.7
CLRN1-201ENST00000295911 PRDX5P30044 214 aa10.68□□□□□ -0.7
CLRN1-201ENST00000295911 PPP4CP60510 307 aa10.68□□□□□ -0.7
CLRN1-201ENST00000295911 STX1AQ16623 288 aa10.68□□□□□ -0.7
CLRN1-201ENST00000295911 NBPF11Q86T75 865 aa10.68□□□□□ -0.7
CLRN1-201ENST00000295911 TXNRD3Q86VQ6 643 aa10.68□□□□□ -0.7
CLRN1-201ENST00000295911 SLF2Q8IX21 1173 aa10.68□□□□□ -0.7
CLRN1-201ENST00000295911 ENAHQ8N8S7 591 aaPredicted RBP10.68□□□□□ -0.7
CLRN1-201ENST00000295911 NUP133Q8WUM0 1156 aa10.68□□□□□ -0.7
CLRN1-201ENST00000295911 AIFM3Q96NN9 605 aa10.68□□□□□ -0.7
CLRN1-201ENST00000295911 KCNK17Q96T54 332 aa10.68□□□□□ -0.7
CLRN1-201ENST00000295911 GOLPH3LQ9H4A5 285 aa10.68□□□□□ -0.7
CLRN1-201ENST00000295911 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.68□□□□□ -0.7
CLRN1-201ENST00000295911 PODXL2Q9NZ53 605 aa10.68□□□□□ -0.7
CLRN1-201ENST00000295911 GGA1Q9UJY5 639 aa10.68□□□□□ -0.7
CLRN1-201ENST00000295911 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.68□□□□□ -0.7
CLRN1-201ENST00000295911 FOCADQ5VW36 1801 aa10.68□□□□□ -0.7
CLRN1-201ENST00000295911 KLRG2A4D1S0 409 aaPredicted RBP10.67□□□□□ -0.7
CLRN1-201ENST00000295911 PRPF3O43395 683 aaKnown RBP10.67□□□□□ -0.7
CLRN1-201ENST00000295911 ZNF500O60304 480 aaPredicted RBP10.67□□□□□ -0.7
CLRN1-201ENST00000295911 CUTAO60888 179 aa10.67□□□□□ -0.7
CLRN1-201ENST00000295911 IL1R1P14778 569 aa10.67□□□□□ -0.7
CLRN1-201ENST00000295911 USP5P45974 858 aa10.67□□□□□ -0.7
CLRN1-201ENST00000295911 ZNF165P49910 485 aa10.67□□□□□ -0.7
CLRN1-201ENST00000295911 MAP3K9P80192 1104 aa10.67□□□□□ -0.7
CLRN1-201ENST00000295911 GPSM2P81274 684 aa10.67□□□□□ -0.7
CLRN1-201ENST00000295911 NOSTRINQ8IVI9 506 aa10.67□□□□□ -0.7
CLRN1-201ENST00000295911 STK11IPQ8N1F8 1099 aa10.67□□□□□ -0.7
CLRN1-201ENST00000295911 TIGD1Q96MW7 591 aa10.67□□□□□ -0.7
CLRN1-201ENST00000295911 SDF4Q9BRK5 362 aa10.67□□□□□ -0.7
CLRN1-201ENST00000295911 NAT10Q9H0A0 1025 aaKnown RBP10.67□□□□□ -0.7
CLRN1-201ENST00000295911 CBX8Q9HC52 389 aa10.67□□□□□ -0.7
CLRN1-201ENST00000295911 GJB4Q9NTQ9 266 aa10.67□□□□□ -0.7
CLRN1-201ENST00000295911 ANO10Q9NW15 660 aa10.67□□□□□ -0.7
CLRN1-201ENST00000295911 WDR70Q9NW82 654 aa10.67□□□□□ -0.7
CLRN1-201ENST00000295911 NRXN2Q9P2S2 1712 aa10.67□□□□□ -0.7
CLRN1-201ENST00000295911 ANKRD31Q8N7Z5 1873 aa10.67□□□□□ -0.7
CLRN1-201ENST00000295911 LTBP1Q14766 1721 aa10.67□□□□□ -0.7
CLRN1-201ENST00000295911 TK2O00142 265 aa10.67□□□□□ -0.7
CLRN1-201ENST00000295911 UFL1O94874 794 aa10.67□□□□□ -0.7
CLRN1-201ENST00000295911 TRIM37O94972 964 aa10.67□□□□□ -0.7
CLRN1-201ENST00000295911 ZRSR1Q15695 479 aaKnown RBP10.67□□□□□ -0.7
CLRN1-201ENST00000295911 RILPL1Q5EBL4 403 aa10.67□□□□□ -0.7
CLRN1-201ENST00000295911 FLAD1Q8NFF5 587 aa10.67□□□□□ -0.7
CLRN1-201ENST00000295911 TBC1D22AQ8WUA7 517 aa10.67□□□□□ -0.7
CLRN1-201ENST00000295911 MAP3K14Q99558 947 aa10.67□□□□□ -0.7
CLRN1-201ENST00000295911 ZNF287Q9HBT7 754 aa10.67□□□□□ -0.7
CLRN1-201ENST00000295911 CEP131Q9UPN4 1083 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms