RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 KRT40Q6A162 431 aa10.59□□□□□ -0.71
PDPN-201ENST00000294489 CCDC73Q6ZRK6 1079 aa10.59□□□□□ -0.71
PDPN-201ENST00000294489 KCNG4Q8TDN1 519 aa10.59□□□□□ -0.71
PDPN-201ENST00000294489 GMLQ99445 158 aa10.59□□□□□ -0.71
PDPN-201ENST00000294489 CLSTN2Q9H4D0 955 aa10.59□□□□□ -0.71
PDPN-201ENST00000294489 POLR3EQ9NVU0 708 aa10.59□□□□□ -0.71
PDPN-201ENST00000294489 G3V3G9 751 aa10.59□□□□□ -0.71
PDPN-201ENST00000294489 NR1I2O75469 434 aa10.59□□□□□ -0.71
PDPN-201ENST00000294489 YEATS4O95619 227 aa10.59□□□□□ -0.71
PDPN-201ENST00000294489 STK38Q15208 465 aa10.59□□□□□ -0.71
PDPN-201ENST00000294489 DCAF8Q5TAQ9 597 aa10.59□□□□□ -0.71
PDPN-201ENST00000294489 CATIPQ7Z7H3 387 aa10.59□□□□□ -0.71
PDPN-201ENST00000294489 CCAR1Q8IX12 1150 aaKnown RBP10.59□□□□□ -0.71
PDPN-201ENST00000294489 RNF26Q9BY78 433 aaPredicted RBP10.59□□□□□ -0.71
PDPN-201ENST00000294489 EHD4Q9H223 541 aa10.59□□□□□ -0.71
PDPN-201ENST00000294489 GJB4Q9NTQ9 266 aa10.59□□□□□ -0.71
PDPN-201ENST00000294489 VIL1P09327 827 aaKnown RBP10.58□□□□□ -0.72
PDPN-201ENST00000294489 TFAP4Q01664 338 aa10.58□□□□□ -0.72
PDPN-201ENST00000294489 FAM47AQ5JRC9 791 aa10.58□□□□□ -0.72
PDPN-201ENST00000294489 NEDD1Q8NHV4 660 aa10.58□□□□□ -0.72
PDPN-201ENST00000294489 AIFM3Q96NN9 605 aa10.58□□□□□ -0.72
PDPN-201ENST00000294489 FUCA2Q9BTY2 467 aa10.58□□□□□ -0.72
PDPN-201ENST00000294489 USP40Q9NVE5 1235 aa10.58□□□□□ -0.72
PDPN-201ENST00000294489 PIM2Q9P1W9 311 aa10.58□□□□□ -0.72
PDPN-201ENST00000294489 SAP30BPQ9UHR5 308 aaKnown RBP10.58□□□□□ -0.72
PDPN-201ENST00000294489 IGKV6D-41A0A0C4DH26 115 aa10.58□□□□□ -0.72
PDPN-201ENST00000294489 NMT2O60551 498 aa10.58□□□□□ -0.72
PDPN-201ENST00000294489 SAFBQ15424 915 aaKnown RBP eCLIP10.58□□□□□ -0.72
PDPN-201ENST00000294489 PDLIM2Q96JY6 352 aa10.58□□□□□ -0.72
PDPN-201ENST00000294489 OSBPL5Q9H0X9 879 aaPredicted RBP10.58□□□□□ -0.72
PDPN-201ENST00000294489 CD2APQ9Y5K6 639 aa10.58□□□□□ -0.72
PDPN-201ENST00000294489 TSPY2A6NKD2 308 aa10.58□□□□□ -0.72
PDPN-201ENST00000294489 PPIP5K2O43314 1243 aa10.58□□□□□ -0.72
PDPN-201ENST00000294489 PRPF3O43395 683 aaKnown RBP10.58□□□□□ -0.72
PDPN-201ENST00000294489 DEXIO95424 95 aa10.58□□□□□ -0.72
PDPN-201ENST00000294489 U2AF2P26368 475 aaKnown RBP eCLIP10.58□□□□□ -0.72
PDPN-201ENST00000294489 AKAP17AQ02040 695 aaKnown RBP10.58□□□□□ -0.72
PDPN-201ENST00000294489 METTL16Q86W50 562 aaKnown RBP10.58□□□□□ -0.72
PDPN-201ENST00000294489 LINC00301Q8NCQ3 95 aa10.58□□□□□ -0.72
PDPN-201ENST00000294489 UPF1Q92900 1129 aaKnown RBP eCLIP10.58□□□□□ -0.72
PDPN-201ENST00000294489 KIF28PB7ZC32 967 aa10.57□□□□□ -0.72
PDPN-201ENST00000294489 CTAGE5O15320 804 aa10.57□□□□□ -0.72
PDPN-201ENST00000294489 ZBTB7AO95365 584 aa10.57□□□□□ -0.72
PDPN-201ENST00000294489 POLD1P28340 1107 aa10.57□□□□□ -0.72
PDPN-201ENST00000294489 SCNN1DP51172 638 aa10.57□□□□□ -0.72
PDPN-201ENST00000294489 ADALQ6DHV7 355 aa10.57□□□□□ -0.72
PDPN-201ENST00000294489 TMTC3Q6ZXV5 915 aa10.57□□□□□ -0.72
PDPN-201ENST00000294489 FBXW7Q969H0 707 aa10.57□□□□□ -0.72
PDPN-201ENST00000294489 ZNF219Q9P2Y4 722 aaPredicted RBP10.57□□□□□ -0.72
PDPN-201ENST00000294489 SWAP70Q9UH65 585 aa10.57□□□□□ -0.72
PDPN-201ENST00000294489 ATRNL1Q5VV63 1379 aa10.57□□□□□ -0.72
PDPN-201ENST00000294489 LTBP3Q9NS15 1303 aa10.57□□□□□ -0.72
PDPN-201ENST00000294489 F8W031 263 aaPredicted RBP10.57□□□□□ -0.72
PDPN-201ENST00000294489 SPTLC2O15270 562 aa10.57□□□□□ -0.72
PDPN-201ENST00000294489 KINO60870 393 aaKnown RBP10.57□□□□□ -0.72
PDPN-201ENST00000294489 PTGER2P43116 358 aa10.57□□□□□ -0.72
PDPN-201ENST00000294489 PKN1Q16512 942 aa10.57□□□□□ -0.72
PDPN-201ENST00000294489 ANO1Q5XXA6 986 aa10.57□□□□□ -0.72
PDPN-201ENST00000294489 RSBN1LQ6PCB5 846 aaPredicted RBP10.57□□□□□ -0.72
PDPN-201ENST00000294489 SASS6Q6UVJ0 657 aa10.57□□□□□ -0.72
PDPN-201ENST00000294489 SLC44A5Q8NCS7 719 aa10.57□□□□□ -0.72
PDPN-201ENST00000294489 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.57□□□□□ -0.72
PDPN-201ENST00000294489 MKNK2Q9HBH9 465 aa10.57□□□□□ -0.72
PDPN-201ENST00000294489 CLIC4Q9Y696 253 aa10.57□□□□□ -0.72
PDPN-201ENST00000294489 MYH4Q9Y623 1939 aa10.57□□□□□ -0.72
PDPN-201ENST00000294489 CNTNAP5Q8WYK1 1306 aa10.57□□□□□ -0.72
PDPN-201ENST00000294489 DICER1Q9UPY3 1922 aaKnown RBP10.56□□□□□ -0.72
PDPN-201ENST00000294489 A0A1W2PQ27 194 aa10.56□□□□□ -0.72
PDPN-201ENST00000294489 A0A1W2PQ64 194 aa10.56□□□□□ -0.72
PDPN-201ENST00000294489 A0A1W2PQD8 194 aa10.56□□□□□ -0.72
PDPN-201ENST00000294489 FAM160A1Q05DH4 1040 aa10.56□□□□□ -0.72
PDPN-201ENST00000294489 GRM4Q14833 912 aa10.56□□□□□ -0.72
PDPN-201ENST00000294489 RBM43Q6ZSC3 357 aaKnown RBP10.56□□□□□ -0.72
PDPN-201ENST00000294489 CKAP2LQ8IYA6 745 aa10.56□□□□□ -0.72
PDPN-201ENST00000294489 MRPS27Q92552 414 aaKnown RBP10.56□□□□□ -0.72
PDPN-201ENST00000294489 PCDHA7Q9UN72 937 aa10.56□□□□□ -0.72
PDPN-201ENST00000294489 XBP1P17861 261 aa10.56□□□□□ -0.72
PDPN-201ENST00000294489 GUCY1A2P33402 732 aa10.56□□□□□ -0.72
PDPN-201ENST00000294489 TYRO3Q06418 890 aa10.56□□□□□ -0.72
PDPN-201ENST00000294489 HS1BP3Q53T59 392 aa10.56□□□□□ -0.72
PDPN-201ENST00000294489 ZNF444Q8N0Y2 327 aaPredicted RBP10.56□□□□□ -0.72
PDPN-201ENST00000294489 CCDC82Q8N4S0 544 aa10.56□□□□□ -0.72
PDPN-201ENST00000294489 FSIP1Q8NA03 581 aa10.56□□□□□ -0.72
PDPN-201ENST00000294489 MTMR14Q8NCE2 650 aa10.56□□□□□ -0.72
PDPN-201ENST00000294489 TSPY3P0CV98 308 aa10.56□□□□□ -0.72
PDPN-201ENST00000294489 TSPY8P0CW00 308 aa10.56□□□□□ -0.72
PDPN-201ENST00000294489 JMYQ8N9B5 988 aa10.56□□□□□ -0.72
PDPN-201ENST00000294489 SHISA4Q96DD7 197 aa10.56□□□□□ -0.72
PDPN-201ENST00000294489 FAM198AQ9UFP1 575 aa10.56□□□□□ -0.72
PDPN-201ENST00000294489 ESPNB1AK53 854 aa10.55□□□□□ -0.72
PDPN-201ENST00000294489 MMP1P03956 469 aa10.55□□□□□ -0.72
PDPN-201ENST00000294489 MMP14P50281 582 aa10.55□□□□□ -0.72
PDPN-201ENST00000294489 DALRD3Q5D0E6 543 aaKnown RBP10.55□□□□□ -0.72
PDPN-201ENST00000294489 KIAA0825Q8IV33 1275 aa10.55□□□□□ -0.72
PDPN-201ENST00000294489 DHX36Q9H2U1 1008 aaKnown RBP10.55□□□□□ -0.72
PDPN-201ENST00000294489 ATF5Q9Y2D1 282 aaPredicted RBP10.55□□□□□ -0.72
PDPN-201ENST00000294489 UBE2Q2LH0YL09 131 aa10.55□□□□□ -0.72
PDPN-201ENST00000294489 ENTPD3O75355 529 aa10.55□□□□□ -0.72
PDPN-201ENST00000294489 PLEKHA8P1O95397 391 aa10.55□□□□□ -0.72
PDPN-201ENST00000294489 SHMT1P34896 483 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms