RNA–Protein interactions for RNA: ENST00000294161.10

TTC9C-201, Transcript of tetratricopeptide repeat domain 9C, humanhuman

TSL 1 (best)

Gene TTC9C, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9C-201ENST00000294161 SHC4Q6S5L8 630 aa16.98■□□□□ 0.31
TTC9C-201ENST00000294161 DHX40Q8IX18 779 aaKnown RBP16.98■□□□□ 0.31
TTC9C-201ENST00000294161 KIAA1524Q8TCG1 905 aa16.98■□□□□ 0.31
TTC9C-201ENST00000294161 ZNF287Q9HBT7 754 aa16.98■□□□□ 0.31
TTC9C-201ENST00000294161 KCNJ14Q9UNX9 436 aa16.98■□□□□ 0.31
TTC9C-201ENST00000294161 R3HCC1Q9Y3T6 440 aaKnown RBP16.98■□□□□ 0.31
TTC9C-201ENST00000294161 LAMB1P07942 1786 aa16.97■□□□□ 0.31
TTC9C-201ENST00000294161 DLEC1Q9Y238 1755 aa16.97■□□□□ 0.31
TTC9C-201ENST00000294161 CYP2D7A0A087X1C5 515 aa16.97■□□□□ 0.31
TTC9C-201ENST00000294161 TSPY2A6NKD2 308 aa16.97■□□□□ 0.31
TTC9C-201ENST00000294161 BBOX1O75936 387 aa16.97■□□□□ 0.31
TTC9C-201ENST00000294161 KANK3Q6NY19 840 aa16.97■□□□□ 0.31
TTC9C-201ENST00000294161 TMC4Q7Z404 712 aa16.97■□□□□ 0.31
TTC9C-201ENST00000294161 SLF2Q8IX21 1173 aa16.97■□□□□ 0.31
TTC9C-201ENST00000294161 CCDC82Q8N4S0 544 aa16.97■□□□□ 0.31
TTC9C-201ENST00000294161 MPNDQ8N594 471 aa16.97■□□□□ 0.31
TTC9C-201ENST00000294161 MCM9Q9NXL9 1143 aa16.97■□□□□ 0.31
TTC9C-201ENST00000294161 KCNH3Q9ULD8 1083 aa16.97■□□□□ 0.31
TTC9C-201ENST00000294161 MYO1BO43795 1136 aa16.96■□□□□ 0.31
TTC9C-201ENST00000294161 PPP4CP60510 307 aa16.96■□□□□ 0.31
TTC9C-201ENST00000294161 TROAPQ12815 778 aa16.96■□□□□ 0.31
TTC9C-201ENST00000294161 TMTC3Q6ZXV5 915 aa16.96■□□□□ 0.31
TTC9C-201ENST00000294161 CCDC186Q7Z3E2 898 aa16.96■□□□□ 0.31
TTC9C-201ENST00000294161 C2CD5Q86YS7 1000 aa16.96■□□□□ 0.31
TTC9C-201ENST00000294161 AOPEPQ8N6M6 819 aa16.96■□□□□ 0.31
TTC9C-201ENST00000294161 SPON1Q9HCB6 807 aa16.96■□□□□ 0.31
TTC9C-201ENST00000294161 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.96■□□□□ 0.31
TTC9C-201ENST00000294161 TUBE1Q9UJT0 475 aa16.96■□□□□ 0.31
TTC9C-201ENST00000294161 MROH7-TTC4A0A0A0MT08 1334 aa16.96■□□□□ 0.31
TTC9C-201ENST00000294161 BAZ2AQ9UIF9 1905 aaKnown RBP16.96■□□□□ 0.31
TTC9C-201ENST00000294161 TRIM75PA6NK02 468 aa16.96■□□□□ 0.3
TTC9C-201ENST00000294161 PRDM1O75626 825 aa16.96■□□□□ 0.3
TTC9C-201ENST00000294161 PTGS1P23219 599 aa16.96■□□□□ 0.3
TTC9C-201ENST00000294161 PTPREP23469 700 aa16.96■□□□□ 0.3
TTC9C-201ENST00000294161 CRY2Q49AN0 593 aa16.96■□□□□ 0.3
TTC9C-201ENST00000294161 OLFM4Q6UX06 510 aa16.96■□□□□ 0.3
TTC9C-201ENST00000294161 CNNM3Q8NE01 707 aa16.96■□□□□ 0.3
TTC9C-201ENST00000294161 PHF20Q9BVI0 1012 aa16.96■□□□□ 0.3
TTC9C-201ENST00000294161 IKBKBO14920 756 aa16.95■□□□□ 0.3
TTC9C-201ENST00000294161 PLCG2P16885 1265 aa16.95■□□□□ 0.3
TTC9C-201ENST00000294161 GNAQP50148 359 aa16.95■□□□□ 0.3
TTC9C-201ENST00000294161 FUT2Q10981 343 aa16.95■□□□□ 0.3
TTC9C-201ENST00000294161 KRBA2Q6ZNG9 492 aa16.95■□□□□ 0.3
TTC9C-201ENST00000294161 TXNRD3Q86VQ6 643 aa16.95■□□□□ 0.3
TTC9C-201ENST00000294161 DGKHQ86XP1 1220 aa16.95■□□□□ 0.3
TTC9C-201ENST00000294161 PRIMPOLQ96LW4 560 aa16.95■□□□□ 0.3
TTC9C-201ENST00000294161 GGA1Q9UJY5 639 aa16.95■□□□□ 0.3
TTC9C-201ENST00000294161 SRPRBQ9Y5M8 271 aaKnown RBP16.95■□□□□ 0.3
TTC9C-201ENST00000294161 V9GY48 417 aaPredicted RBP16.95■□□□□ 0.3
TTC9C-201ENST00000294161 SRGNP10124 158 aa16.94■□□□□ 0.3
TTC9C-201ENST00000294161 TOB1P50616 345 aaPredicted RBP16.94■□□□□ 0.3
TTC9C-201ENST00000294161 GSDMDP57764 484 aa16.94■□□□□ 0.3
TTC9C-201ENST00000294161 C12orf60Q5U649 245 aa16.94■□□□□ 0.3
TTC9C-201ENST00000294161 ZNF622Q969S3 477 aaKnown RBP eCLIP16.94■□□□□ 0.3
TTC9C-201ENST00000294161 KCNF1Q9H3M0 494 aa16.94■□□□□ 0.3
TTC9C-201ENST00000294161 KAT14Q9H8E8 782 aa16.94■□□□□ 0.3
TTC9C-201ENST00000294161 MYH2Q9UKX2 1941 aa16.94■□□□□ 0.3
TTC9C-201ENST00000294161 KIF13BQ9NQT8 1826 aa16.94■□□□□ 0.3
TTC9C-201ENST00000294161 PDE6BP35913 854 aa16.93■□□□□ 0.3
TTC9C-201ENST00000294161 PKN1Q16512 942 aa16.93■□□□□ 0.3
TTC9C-201ENST00000294161 DPCR1Q3MIW9 517 aa16.93■□□□□ 0.3
TTC9C-201ENST00000294161 TBC1D22AQ8WUA7 517 aa16.93■□□□□ 0.3
TTC9C-201ENST00000294161 ANKS1AQ92625 1134 aa16.93■□□□□ 0.3
TTC9C-201ENST00000294161 MKNK2Q9HBH9 465 aa16.93■□□□□ 0.3
TTC9C-201ENST00000294161 IMPACTQ9P2X3 320 aa16.93■□□□□ 0.3
TTC9C-201ENST00000294161 ZNF219Q9P2Y4 722 aaPredicted RBP16.93■□□□□ 0.3
TTC9C-201ENST00000294161 DACH1Q9UI36 760 aa16.93■□□□□ 0.3
TTC9C-201ENST00000294161 FBXO2Q9UK22 296 aaPredicted RBP16.93■□□□□ 0.3
TTC9C-201ENST00000294161 ROBO3Q96MS0 1386 aa16.93■□□□□ 0.3
TTC9C-201ENST00000294161 MYH6P13533 1939 aa16.93■□□□□ 0.3
TTC9C-201ENST00000294161 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.93■□□□□ 0.3
TTC9C-201ENST00000294161 KLRG2A4D1S0 409 aaPredicted RBP16.93■□□□□ 0.3
TTC9C-201ENST00000294161 UBE2Q2LH0YL09 131 aa16.93■□□□□ 0.3
TTC9C-201ENST00000294161 DPEP1P16444 411 aa16.93■□□□□ 0.3
TTC9C-201ENST00000294161 CALML3P27482 149 aa16.93■□□□□ 0.3
TTC9C-201ENST00000294161 GPSM2P81274 684 aa16.93■□□□□ 0.3
TTC9C-201ENST00000294161 CMTR1Q8N1G2 835 aaKnown RBP16.93■□□□□ 0.3
TTC9C-201ENST00000294161 NLGN2Q8NFZ4 835 aa16.93■□□□□ 0.3
TTC9C-201ENST00000294161 FERMT2Q96AC1 680 aa16.93■□□□□ 0.3
TTC9C-201ENST00000294161 CRAMP1Q96RY5 1269 aa16.93■□□□□ 0.3
TTC9C-201ENST00000294161 CABP5Q9NP86 173 aa16.93■□□□□ 0.3
TTC9C-201ENST00000294161 UFL1O94874 794 aa16.92■□□□□ 0.3
TTC9C-201ENST00000294161 HOXA10P31260 410 aaPredicted RBP16.92■□□□□ 0.3
TTC9C-201ENST00000294161 NR5A1Q13285 461 aa16.92■□□□□ 0.3
TTC9C-201ENST00000294161 ZNF444Q8N0Y2 327 aaPredicted RBP16.92■□□□□ 0.3
TTC9C-201ENST00000294161 FAM177A1Q8N128 213 aaPredicted RBP16.92■□□□□ 0.3
TTC9C-201ENST00000294161 CLIC6Q96NY7 704 aa16.92■□□□□ 0.3
TTC9C-201ENST00000294161 TCP11L1Q9NUJ3 509 aa16.92■□□□□ 0.3
TTC9C-201ENST00000294161 PODXL2Q9NZ53 605 aa16.92■□□□□ 0.3
TTC9C-201ENST00000294161 VPS54Q9P1Q0 977 aa16.92■□□□□ 0.3
TTC9C-201ENST00000294161 PLEKHA8P1O95397 391 aa16.91■□□□□ 0.3
TTC9C-201ENST00000294161 IL1R1P14778 569 aa16.91■□□□□ 0.3
TTC9C-201ENST00000294161 TRAPPC10P48553 1259 aa16.91■□□□□ 0.3
TTC9C-201ENST00000294161 TFAP4Q01664 338 aa16.91■□□□□ 0.3
TTC9C-201ENST00000294161 CD209Q9NNX6 404 aa16.91■□□□□ 0.3
TTC9C-201ENST00000294161 SH3GLB2Q9NR46 395 aa16.91■□□□□ 0.3
TTC9C-201ENST00000294161 MKRN1Q9UHC7 482 aaKnown RBP16.91■□□□□ 0.3
TTC9C-201ENST00000294161 CNTNAP5Q8WYK1 1306 aa16.91■□□□□ 0.3
TTC9C-201ENST00000294161 SLX4Q8IY92 1834 aa16.91■□□□□ 0.3
TTC9C-201ENST00000294161 H0YIN7 160 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms