RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 PRDM1O75626 825 aa31.94■■■□□ 2.7
SSU72-201ENST00000291386 PCP11498 1178 aaKnown RBP31.94■■■□□ 2.7
SSU72-201ENST00000291386 GNL3Q9BVP2 549 aaKnown RBP eCLIP31.94■■■□□ 2.7
SSU72-201ENST00000291386 TACC3Q9Y6A5 838 aa31.94■■■□□ 2.7
SSU72-201ENST00000291386 ZNF213O14771 459 aa31.93■■■□□ 2.7
SSU72-201ENST00000291386 PTH1RQ03431 593 aa31.93■■■□□ 2.7
SSU72-201ENST00000291386 MTMR2Q13614 643 aa31.93■■■□□ 2.7
SSU72-201ENST00000291386 GPAT2Q6NUI2 795 aa31.93■■■□□ 2.7
SSU72-201ENST00000291386 NBPF3Q9H094 633 aa31.93■■■□□ 2.7
SSU72-201ENST00000291386 KANSL2Q9H9L4 492 aa31.93■■■□□ 2.7
SSU72-201ENST00000291386 SLC45A1Q9Y2W3 748 aa31.93■■■□□ 2.7
SSU72-201ENST00000291386 PLIN4Q96Q06 1357 aa31.93■■■□□ 2.7
SSU72-201ENST00000291386 CTCFP49711 727 aaPredicted RBP31.92■■■□□ 2.7
SSU72-201ENST00000291386 STAG1Q8WVM7 1258 aa31.92■■■□□ 2.7
SSU72-201ENST00000291386 MAP4K1Q92918 833 aa31.92■■■□□ 2.7
SSU72-201ENST00000291386 KIAA1683Q9H0B3 1180 aa31.92■■■□□ 2.7
SSU72-201ENST00000291386 IGKV6D-41A0A0C4DH26 115 aa31.91■■■□□ 2.7
SSU72-201ENST00000291386 NT5C2P49902 561 aa31.91■■■□□ 2.7
SSU72-201ENST00000291386 HMGCS2P54868 508 aa31.91■■■□□ 2.7
SSU72-201ENST00000291386 HAND2P61296 217 aa31.91■■■□□ 2.7
SSU72-201ENST00000291386 IMMTQ16891 758 aaKnown RBP31.91■■■□□ 2.7
SSU72-201ENST00000291386 AKNAD1Q5T1N1 836 aa31.91■■■□□ 2.7
SSU72-201ENST00000291386 SIAH1Q8IUQ4 282 aa31.91■■■□□ 2.7
SSU72-201ENST00000291386 NEDD1Q8NHV4 660 aa31.91■■■□□ 2.7
SSU72-201ENST00000291386 C12orf42Q96LP6 360 aa31.91■■■□□ 2.7
SSU72-201ENST00000291386 HSPA8P11142 646 aaKnown RBP31.9■■■□□ 2.7
SSU72-201ENST00000291386 USP14P54578 494 aa31.9■■■□□ 2.7
SSU72-201ENST00000291386 ICA1Q05084 483 aa31.9■■■□□ 2.7
SSU72-201ENST00000291386 USP17L2Q6R6M4 530 aa31.9■■■□□ 2.7
SSU72-201ENST00000291386 GADL1Q6ZQY3 521 aa31.9■■■□□ 2.7
SSU72-201ENST00000291386 KIAA1211Q6ZU35 1233 aa31.9■■■□□ 2.7
SSU72-201ENST00000291386 ACER1Q8TDN7 264 aa31.9■■■□□ 2.7
SSU72-201ENST00000291386 RNF41Q9H4P4 317 aaPredicted RBP31.9■■■□□ 2.7
SSU72-201ENST00000291386 AGTPBP1Q9UPW5 1226 aa31.9■■■□□ 2.7
SSU72-201ENST00000291386 U3KPZ7 1027 aaPredicted RBP31.9■■■□□ 2.7
SSU72-201ENST00000291386 NOM1Q5C9Z4 860 aaKnown RBP31.89■■■□□ 2.7
SSU72-201ENST00000291386 LSG1Q9H089 658 aaKnown RBP31.89■■■□□ 2.7
SSU72-201ENST00000291386 ARHGEF10LQ9HCE6 1279 aa31.89■■■□□ 2.7
SSU72-201ENST00000291386 INCENPQ9NQS7 918 aa31.89■■■□□ 2.7
SSU72-201ENST00000291386 TMOD4Q9NZQ9 345 aa31.89■■■□□ 2.7
SSU72-201ENST00000291386 A0A1W2PRG0 241 aa31.88■■■□□ 2.69
SSU72-201ENST00000291386 PDHXO00330 501 aa31.88■■■□□ 2.69
SSU72-201ENST00000291386 MFSD6Q6ZSS7 791 aa31.88■■■□□ 2.69
SSU72-201ENST00000291386 TBC1D10CQ8IV04 446 aa31.88■■■□□ 2.69
SSU72-201ENST00000291386 FEZ1Q99689 392 aa31.88■■■□□ 2.69
SSU72-201ENST00000291386 EMILIN3Q9NT22 766 aa31.88■■■□□ 2.69
SSU72-201ENST00000291386 TBC1D8O95759 1140 aa31.87■■■□□ 2.69
SSU72-201ENST00000291386 TSPY3P0CV98 308 aa31.87■■■□□ 2.69
SSU72-201ENST00000291386 TSPY8P0CW00 308 aa31.87■■■□□ 2.69
SSU72-201ENST00000291386 TFAP4Q01664 338 aa31.87■■■□□ 2.69
SSU72-201ENST00000291386 TAF1CQ15572 869 aaPredicted RBP31.87■■■□□ 2.69
SSU72-201ENST00000291386 SH2D4AQ9H788 454 aa31.87■■■□□ 2.69
SSU72-201ENST00000291386 NYAP2Q9P242 653 aa31.87■■■□□ 2.69
SSU72-201ENST00000291386 TMX2Q9Y320 296 aa31.87■■■□□ 2.69
SSU72-201ENST00000291386 CRHR2Q13324 411 aa31.86■■■□□ 2.69
SSU72-201ENST00000291386 FAM47AQ5JRC9 791 aa31.86■■■□□ 2.69
SSU72-201ENST00000291386 ZFYVE28Q9HCC9 887 aa31.86■■■□□ 2.69
SSU72-201ENST00000291386 EEF2P13639 858 aaKnown RBP31.85■■■□□ 2.69
SSU72-201ENST00000291386 DGKZQ13574 1117 aa31.85■■■□□ 2.69
SSU72-201ENST00000291386 TREML2Q5T2D2 321 aa31.85■■■□□ 2.69
SSU72-201ENST00000291386 CLEC10AQ8IUN9 316 aa31.85■■■□□ 2.69
SSU72-201ENST00000291386 TSKSQ9UJT2 592 aa31.85■■■□□ 2.69
SSU72-201ENST00000291386 TSPY2A6NKD2 308 aa31.84■■■□□ 2.69
SSU72-201ENST00000291386 HOXA7P31268 230 aaPredicted RBP31.84■■■□□ 2.69
SSU72-201ENST00000291386 PABPC4Q13310 644 aaKnown RBP eCLIP31.84■■■□□ 2.691e-7■■■■□ 21.9
SSU72-201ENST00000291386 R3HDMLQ9H3Y0 253 aa31.84■■■□□ 2.69
SSU72-201ENST00000291386 MTMR4Q9NYA4 1195 aa31.84■■■□□ 2.69
SSU72-201ENST00000291386 SYNPO2Q9UMS6 1093 aa31.84■■■□□ 2.69
SSU72-201ENST00000291386 RANBP6O60518 1105 aaKnown RBP31.83■■■□□ 2.69
SSU72-201ENST00000291386 CYP21A2P08686 494 aa31.83■■■□□ 2.69
SSU72-201ENST00000291386 PPP4R3BQ5MIZ7 849 aa31.83■■■□□ 2.69
SSU72-201ENST00000291386 MKL1Q969V6 931 aa31.83■■■□□ 2.69
SSU72-201ENST00000291386 CEP95Q96GE4 821 aa31.83■■■□□ 2.69
SSU72-201ENST00000291386 PARK7Q99497 189 aaKnown RBP31.83■■■□□ 2.69
SSU72-201ENST00000291386 ANO2Q9NQ90 1003 aa31.83■■■□□ 2.69
SSU72-201ENST00000291386 RBM8AQ9Y5S9 174 aaKnown RBP31.83■■■□□ 2.69
SSU72-201ENST00000291386 TLR2O60603 784 aa31.82■■■□□ 2.68
SSU72-201ENST00000291386 LBX1P52954 281 aa31.82■■■□□ 2.68
SSU72-201ENST00000291386 PRDM10Q9NQV6 1147 aa31.82■■■□□ 2.68
SSU72-201ENST00000291386 TOMM22Q9NS69 142 aa31.82■■■□□ 2.68
SSU72-201ENST00000291386 TCP11L1Q9NUJ3 509 aa31.82■■■□□ 2.68
SSU72-201ENST00000291386 PNMA3Q9UL41 463 aa31.82■■■□□ 2.68
SSU72-201ENST00000291386 MYH4Q9Y623 1939 aa31.82■■■□□ 2.68
SSU72-201ENST00000291386 NEDD4P46934 1319 aa31.81■■■□□ 2.68
SSU72-201ENST00000291386 ADGRA2Q96PE1 1338 aa31.81■■■□□ 2.68
SSU72-201ENST00000291386 NOVP48745 357 aa31.81■■■□□ 2.68
SSU72-201ENST00000291386 ZYXQ15942 572 aaKnown RBP31.81■■■□□ 2.68
SSU72-201ENST00000291386 ESR2Q92731 530 aa31.81■■■□□ 2.68
SSU72-201ENST00000291386 VCPKMTQ9H867 229 aa31.81■■■□□ 2.68
SSU72-201ENST00000291386 GPR25O00155 361 aa31.8■■■□□ 2.68
SSU72-201ENST00000291386 TTLL1O95922 423 aa31.8■■■□□ 2.68
SSU72-201ENST00000291386 RRP12Q5JTH9 1297 aaKnown RBP31.8■■■□□ 2.68
SSU72-201ENST00000291386 LPAR1Q92633 364 aa31.8■■■□□ 2.68
SSU72-201ENST00000291386 CNNM2Q9H8M5 875 aa31.8■■■□□ 2.68
SSU72-201ENST00000291386 IL17RBQ9NRM6 502 aa31.8■■■□□ 2.68
SSU72-201ENST00000291386 VCAM1P19320 739 aa31.79■■■□□ 2.68
SSU72-201ENST00000291386 KRT23Q9C075 422 aa31.79■■■□□ 2.68
SSU72-201ENST00000291386 OSBPP22059 807 aa31.78■■■□□ 2.68
SSU72-201ENST00000291386 ATP2B2Q01814 1243 aa31.78■■■□□ 2.68
SSU72-201ENST00000291386 NECTIN1Q15223 517 aa31.78■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms