RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 CCL5P13501 91 aa12.61□□□□□ -0.39
SNF8-201ENST00000290330 USP14P54578 494 aa12.61□□□□□ -0.39
SNF8-201ENST00000290330 SEPT2Q15019 361 aa12.61□□□□□ -0.39
SNF8-201ENST00000290330 TSHZ3Q63HK5 1081 aa12.61□□□□□ -0.39
SNF8-201ENST00000290330 POTEEQ6S8J3 1075 aa12.61□□□□□ -0.39
SNF8-201ENST00000290330 SLC44A5Q8NCS7 719 aa12.61□□□□□ -0.39
SNF8-201ENST00000290330 SHISA4Q96DD7 197 aa12.61□□□□□ -0.39
SNF8-201ENST00000290330 DYNLL2Q96FJ2 89 aa12.61□□□□□ -0.39
SNF8-201ENST00000290330 RNF208Q9H0X6 261 aa12.61□□□□□ -0.39
SNF8-201ENST00000290330 GJD2Q9UKL4 321 aa12.61□□□□□ -0.39
SNF8-201ENST00000290330 TAOK2Q9UL54 1235 aa12.61□□□□□ -0.39
SNF8-201ENST00000290330 TNRC18O15417 2968 aaPredicted RBP12.61□□□□□ -0.39
SNF8-201ENST00000290330 MGAMO43451 1857 aa12.61□□□□□ -0.39
SNF8-201ENST00000290330 MKI67P46013 3256 aaKnown RBP12.61□□□□□ -0.39
SNF8-201ENST00000290330 USP17L15C9J2P7 530 aa12.6□□□□□ -0.39
SNF8-201ENST00000290330 USP17L13C9JLJ4 530 aa12.6□□□□□ -0.39
SNF8-201ENST00000290330 USP17L12C9JPN9 530 aa12.6□□□□□ -0.39
SNF8-201ENST00000290330 USP17L11C9JVI0 530 aa12.6□□□□□ -0.39
SNF8-201ENST00000290330 USP17L21D6R901 530 aa12.6□□□□□ -0.39
SNF8-201ENST00000290330 USP17L18D6R9N7 530 aa12.6□□□□□ -0.39
SNF8-201ENST00000290330 USP17L22D6RA61 530 aa12.6□□□□□ -0.39
SNF8-201ENST00000290330 USP17L17D6RBQ6 530 aa12.6□□□□□ -0.39
SNF8-201ENST00000290330 USP17L19D6RCP7 530 aa12.6□□□□□ -0.39
SNF8-201ENST00000290330 USP17L20D6RJB6 530 aa12.6□□□□□ -0.39
SNF8-201ENST00000290330 SMIM22K7EJ46 135 aa12.6□□□□□ -0.39
SNF8-201ENST00000290330 GJA8P48165 433 aa12.6□□□□□ -0.39
SNF8-201ENST00000290330 USP17L24Q0WX57 530 aa12.6□□□□□ -0.39
SNF8-201ENST00000290330 Q3C1V9 767 aa12.6□□□□□ -0.39
SNF8-201ENST00000290330 C12orf60Q5U649 245 aa12.6□□□□□ -0.39
SNF8-201ENST00000290330 KBTBD3Q8NAB2 608 aa12.6□□□□□ -0.39
SNF8-201ENST00000290330 GPRC5AQ8NFJ5 357 aa12.6□□□□□ -0.39
SNF8-201ENST00000290330 NKX2-3Q8TAU0 364 aa12.6□□□□□ -0.39
SNF8-201ENST00000290330 GTF3C2Q8WUA4 911 aaPredicted RBP12.6□□□□□ -0.39
SNF8-201ENST00000290330 GPATCH3Q96I76 525 aa12.6□□□□□ -0.39
SNF8-201ENST00000290330 UNC93B1Q9H1C4 597 aa12.6□□□□□ -0.39
SNF8-201ENST00000290330 SWAP70Q9UH65 585 aa12.6□□□□□ -0.39
SNF8-201ENST00000290330 SLC4A4Q9Y6R1 1079 aa12.6□□□□□ -0.39
SNF8-201ENST00000290330 NAV1Q8NEY1 1877 aa12.59□□□□□ -0.39
SNF8-201ENST00000290330 CYP2D7A0A087X1C5 515 aa12.59□□□□□ -0.39
SNF8-201ENST00000290330 A0A1W2PRG0 241 aa12.59□□□□□ -0.39
SNF8-201ENST00000290330 MPHOSPH10O00566 681 aaKnown RBP12.59□□□□□ -0.39
SNF8-201ENST00000290330 INHAP05111 366 aa12.59□□□□□ -0.39
SNF8-201ENST00000290330 VCAM1P19320 739 aa12.59□□□□□ -0.39
SNF8-201ENST00000290330 CATSPERGQ6ZRH7 1159 aa12.59□□□□□ -0.39
SNF8-201ENST00000290330 TMEM179Q6ZVK1 233 aa12.59□□□□□ -0.39
SNF8-201ENST00000290330 DDRGK1Q96HY6 314 aa12.59□□□□□ -0.39
SNF8-201ENST00000290330 STRBPQ96SI9 672 aaKnown RBP12.59□□□□□ -0.39
SNF8-201ENST00000290330 CRBNQ96SW2 442 aa12.59□□□□□ -0.39
SNF8-201ENST00000290330 AKR1B1P15121 316 aa12.58□□□□□ -0.4
SNF8-201ENST00000290330 CDK8P49336 464 aa12.58□□□□□ -0.4
SNF8-201ENST00000290330 ERVK-9P63128 1117 aa12.58□□□□□ -0.4
SNF8-201ENST00000290330 ERVK-24P63145 666 aa12.58□□□□□ -0.4
SNF8-201ENST00000290330 CTR9Q6PD62 1173 aa12.58□□□□□ -0.4
SNF8-201ENST00000290330 C16orf86Q6ZW13 317 aa12.58□□□□□ -0.4
SNF8-201ENST00000290330 AMOTL1Q8IY63 956 aa12.58□□□□□ -0.4
SNF8-201ENST00000290330 U2AF1L4Q8WU68 220 aaKnown RBP12.58□□□□□ -0.4
SNF8-201ENST00000290330 APPBP2Q92624 585 aa12.58□□□□□ -0.4
SNF8-201ENST00000290330 OSBP2Q969R2 916 aa12.58□□□□□ -0.4
SNF8-201ENST00000290330 PAGR1Q9BTK6 254 aa12.58□□□□□ -0.4
SNF8-201ENST00000290330 PORCNQ9H237 461 aa12.58□□□□□ -0.4
SNF8-201ENST00000290330 TTC41PQ6P2S7 1318 aa12.58□□□□□ -0.4
SNF8-201ENST00000290330 RNF113AO15541 343 aaKnown RBP12.57□□□□□ -0.4
SNF8-201ENST00000290330 CNMDO75829 334 aa12.57□□□□□ -0.4
SNF8-201ENST00000290330 SGPL1O95470 568 aa12.57□□□□□ -0.4
SNF8-201ENST00000290330 ZFYP08048 801 aaPredicted RBP12.57□□□□□ -0.4
SNF8-201ENST00000290330 MAPK4P31152 587 aa12.57□□□□□ -0.4
SNF8-201ENST00000290330 ERICH6BQ5W0A0 696 aa12.57□□□□□ -0.4
SNF8-201ENST00000290330 LBX2Q6XYB7 198 aa12.57□□□□□ -0.4
SNF8-201ENST00000290330 SIAH1Q8IUQ4 282 aa12.57□□□□□ -0.4
SNF8-201ENST00000290330 PI4K2BQ8TCG2 481 aa12.57□□□□□ -0.4
SNF8-201ENST00000290330 OTUD7AQ8TE49 926 aaPredicted RBP12.57□□□□□ -0.4
SNF8-201ENST00000290330 CCDC17Q96LX7 622 aa12.57□□□□□ -0.4
SNF8-201ENST00000290330 RPAP3Q9H6T3 665 aaPredicted RBP12.57□□□□□ -0.4
SNF8-201ENST00000290330 RABGAP1Q9Y3P9 1069 aa12.57□□□□□ -0.4
SNF8-201ENST00000290330 DOCK3Q8IZD9 2030 aa12.57□□□□□ -0.4
SNF8-201ENST00000290330 SPDYE16A6NNV3 312 aaPredicted RBP12.56□□□□□ -0.4
SNF8-201ENST00000290330 GSG1L2A8MUP6 293 aa12.56□□□□□ -0.4
SNF8-201ENST00000290330 ERC2O15083 957 aa12.56□□□□□ -0.4
SNF8-201ENST00000290330 GLRX3O76003 335 aaKnown RBP12.56□□□□□ -0.4
SNF8-201ENST00000290330 HMGCRP04035 888 aa12.56□□□□□ -0.4
SNF8-201ENST00000290330 XRCC5P13010 732 aaKnown RBP12.56□□□□□ -0.4
SNF8-201ENST00000290330 CYP2B6P20813 491 aa12.56□□□□□ -0.4
SNF8-201ENST00000290330 GPR142Q7Z601 462 aa12.56□□□□□ -0.4
SNF8-201ENST00000290330 UBE2Q1Q7Z7E8 422 aa12.56□□□□□ -0.4
SNF8-201ENST00000290330 CLEC10AQ8IUN9 316 aa12.56□□□□□ -0.4
SNF8-201ENST00000290330 CCAR1Q8IX12 1150 aaKnown RBP12.56□□□□□ -0.4
SNF8-201ENST00000290330 SOCS4Q8WXH5 440 aa12.56□□□□□ -0.4
SNF8-201ENST00000290330 TRIB2Q92519 343 aa12.56□□□□□ -0.4
SNF8-201ENST00000290330 DEFB118Q96PH6 123 aa12.56□□□□□ -0.4
SNF8-201ENST00000290330 NUDT12Q9BQG2 462 aa12.56□□□□□ -0.4
SNF8-201ENST00000290330 PAK6Q9NQU5 681 aaPredicted RBP12.56□□□□□ -0.4
SNF8-201ENST00000290330 ARPP21Q9UBL0 812 aaPredicted RBP12.56□□□□□ -0.4
SNF8-201ENST00000290330 GPAA1O43292 621 aa12.55□□□□□ -0.4
SNF8-201ENST00000290330 MX1P20591 662 aa12.55□□□□□ -0.4
SNF8-201ENST00000290330 CCNA1P78396 465 aa12.55□□□□□ -0.4
SNF8-201ENST00000290330 ICA1Q05084 483 aa12.55□□□□□ -0.4
SNF8-201ENST00000290330 TRIM32Q13049 653 aa12.55□□□□□ -0.4
SNF8-201ENST00000290330 COG2Q14746 738 aa12.55□□□□□ -0.4
SNF8-201ENST00000290330 SBK1Q52WX2 424 aa12.55□□□□□ -0.4
SNF8-201ENST00000290330 KIAA1755Q5JYT7 1200 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms