RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 PTGS1P23219 599 aa22.19■■□□□ 1.14
BRAF-201ENST00000288602 CEP57L1Q8IYX8 460 aa22.19■■□□□ 1.14
BRAF-201ENST00000288602 KRI1Q8N9T8 703 aaKnown RBP22.19■■□□□ 1.14
BRAF-201ENST00000288602 CNTNAP5Q8WYK1 1306 aa22.19■■□□□ 1.14
BRAF-201ENST00000288602 HOXA10P31260 410 aaPredicted RBP22.19■■□□□ 1.14
BRAF-201ENST00000288602 ZRSR1Q15695 479 aaKnown RBP22.19■■□□□ 1.14
BRAF-201ENST00000288602 RILPL1Q5EBL4 403 aa22.19■■□□□ 1.14
BRAF-201ENST00000288602 PHF20Q9BVI0 1012 aa22.19■■□□□ 1.14
BRAF-201ENST00000288602 CUTAO60888 179 aa22.18■■□□□ 1.14
BRAF-201ENST00000288602 PNOCQ13519 176 aa22.18■■□□□ 1.14
BRAF-201ENST00000288602 LONRF3Q496Y0 759 aa22.18■■□□□ 1.14
BRAF-201ENST00000288602 XBP1P17861 261 aa22.18■■□□□ 1.14
BRAF-201ENST00000288602 COL23A1Q86Y22 540 aaPredicted RBP22.18■■□□□ 1.14
BRAF-201ENST00000288602 WNT7AO00755 349 aa22.17■■□□□ 1.14
BRAF-201ENST00000288602 PPEF1O14829 653 aaPredicted RBP22.17■■□□□ 1.14
BRAF-201ENST00000288602 PPP4CP60510 307 aa22.17■■□□□ 1.14
BRAF-201ENST00000288602 CCDC186Q7Z3E2 898 aa22.17■■□□□ 1.14
BRAF-201ENST00000288602 KCNH3Q9ULD8 1083 aa22.17■■□□□ 1.14
BRAF-201ENST00000288602 ADAMTS3O15072 1205 aa22.17■■□□□ 1.14
BRAF-201ENST00000288602 ZBTB22O15209 634 aa22.17■■□□□ 1.14
BRAF-201ENST00000288602 LDHCP07864 332 aa22.17■■□□□ 1.14
BRAF-201ENST00000288602 KRT2P35908 639 aa22.17■■□□□ 1.14
BRAF-201ENST00000288602 CRAMP1Q96RY5 1269 aa22.17■■□□□ 1.14
BRAF-201ENST00000288602 KAT14Q9H8E8 782 aa22.17■■□□□ 1.14
BRAF-201ENST00000288602 PODXL2Q9NZ53 605 aa22.17■■□□□ 1.14
BRAF-201ENST00000288602 FBXO2Q9UK22 296 aaPredicted RBP22.17■■□□□ 1.14
BRAF-201ENST00000288602 FOXN1O15353 648 aa22.16■■□□□ 1.14
BRAF-201ENST00000288602 GTF2IP78347 998 aa22.16■■□□□ 1.14
BRAF-201ENST00000288602 TMED8Q6PL24 325 aaPredicted RBP22.16■■□□□ 1.14
BRAF-201ENST00000288602 STAG2Q8N3U4 1231 aa22.16■■□□□ 1.14
BRAF-201ENST00000288602 PYCARDQ9ULZ3 195 aa22.16■■□□□ 1.14
BRAF-201ENST00000288602 F8W031 263 aaPredicted RBP22.16■■□□□ 1.14
BRAF-201ENST00000288602 APBA3O96018 575 aa22.16■■□□□ 1.14
BRAF-201ENST00000288602 TSPY3P0CV98 308 aa22.16■■□□□ 1.14
BRAF-201ENST00000288602 TSPY8P0CW00 308 aa22.16■■□□□ 1.14
BRAF-201ENST00000288602 CLIP2Q9UDT6 1046 aa22.16■■□□□ 1.14
BRAF-201ENST00000288602 GOLGA6L6A8MZA4 724 aa22.15■■□□□ 1.14
BRAF-201ENST00000288602 TEX11Q8IYF3 940 aa22.15■■□□□ 1.14
BRAF-201ENST00000288602 PNMA1Q8ND90 353 aa22.15■■□□□ 1.14
BRAF-201ENST00000288602 R3HCC1Q9Y3T6 440 aaKnown RBP22.15■■□□□ 1.14
BRAF-201ENST00000288602 KLRG2A4D1S0 409 aaPredicted RBP22.15■■□□□ 1.14
BRAF-201ENST00000288602 NPY5RQ15761 445 aa22.15■■□□□ 1.14
BRAF-201ENST00000288602 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.15■■□□□ 1.14
BRAF-201ENST00000288602 USP49Q70CQ1 688 aa22.15■■□□□ 1.14
BRAF-201ENST00000288602 METTL16Q86W50 562 aaKnown RBP22.15■■□□□ 1.14
BRAF-201ENST00000288602 AMOTL1Q8IY63 956 aa22.15■■□□□ 1.14
BRAF-201ENST00000288602 ZNF444Q8N0Y2 327 aaPredicted RBP22.15■■□□□ 1.14
BRAF-201ENST00000288602 NAT10Q9H0A0 1025 aaKnown RBP22.15■■□□□ 1.14
BRAF-201ENST00000288602 PTPREP23469 700 aa22.14■■□□□ 1.13
BRAF-201ENST00000288602 LRMPQ12912 555 aa22.14■■□□□ 1.13
BRAF-201ENST00000288602 MSL1Q68DK7 614 aa22.14■■□□□ 1.13
BRAF-201ENST00000288602 RASGRP2Q7LDG7 609 aa22.14■■□□□ 1.13
BRAF-201ENST00000288602 CNNM3Q8NE01 707 aa22.14■■□□□ 1.13
BRAF-201ENST00000288602 TIGD1Q96MW7 591 aa22.14■■□□□ 1.13
BRAF-201ENST00000288602 STX8Q9UNK0 236 aa22.14■■□□□ 1.13
BRAF-201ENST00000288602 GPR75-ASB3A0A0A6YYF3 556 aa22.14■■□□□ 1.13
BRAF-201ENST00000288602 FAM237AA0A1B0GTK4 181 aa22.14■■□□□ 1.13
BRAF-201ENST00000288602 NLRP12P59046 1061 aa22.14■■□□□ 1.13
BRAF-201ENST00000288602 AEBP2Q6ZN18 517 aaPredicted RBP22.14■■□□□ 1.13
BRAF-201ENST00000288602 FOXP4Q8IVH2 680 aaPredicted RBP22.14■■□□□ 1.13
BRAF-201ENST00000288602 PDILTQ8N807 584 aa22.14■■□□□ 1.13
BRAF-201ENST00000288602 MXD3Q9BW11 206 aa22.14■■□□□ 1.13
BRAF-201ENST00000288602 NAV1Q8NEY1 1877 aa22.13■■□□□ 1.13
BRAF-201ENST00000288602 NOLC1Q14978 699 aaKnown RBP eCLIP22.13■■□□□ 1.13
BRAF-201ENST00000288602 CCDC144BQ3MJ40 725 aa22.13■■□□□ 1.13
BRAF-201ENST00000288602 KRBA2Q6ZNG9 492 aa22.13■■□□□ 1.13
BRAF-201ENST00000288602 POLR2DO15514 142 aaKnown RBP22.13■■□□□ 1.13
BRAF-201ENST00000288602 RASA1P20936 1047 aa22.13■■□□□ 1.13
BRAF-201ENST00000288602 SP8Q8IXZ3 490 aa22.13■■□□□ 1.13
BRAF-201ENST00000288602 CSRNP2Q9H175 543 aa22.13■■□□□ 1.13
BRAF-201ENST00000288602 ANKRD31Q8N7Z5 1873 aa22.12■■□□□ 1.13
BRAF-201ENST00000288602 CDK5RAP2Q96SN8 1893 aa22.12■■□□□ 1.13
BRAF-201ENST00000288602 SCG2P13521 617 aa22.12■■□□□ 1.13
BRAF-201ENST00000288602 RHBDL3P58872 404 aa22.12■■□□□ 1.13
BRAF-201ENST00000288602 RBM6P78332 1123 aaKnown RBP22.12■■□□□ 1.13
BRAF-201ENST00000288602 GPKOWQ92917 476 aaPredicted RBP eCLIP22.12■■□□□ 1.136e-6■□□□□ 11.1
BRAF-201ENST00000288602 FLT1P17948 1338 aa22.12■■□□□ 1.13
BRAF-201ENST00000288602 SRGNP10124 158 aa22.12■■□□□ 1.13
BRAF-201ENST00000288602 ZNF174Q15697 407 aa22.12■■□□□ 1.13
BRAF-201ENST00000288602 DOK7Q18PE1 504 aa22.12■■□□□ 1.13
BRAF-201ENST00000288602 SARM1Q6SZW1 724 aa22.12■■□□□ 1.13
BRAF-201ENST00000288602 DGKHQ86XP1 1220 aa22.12■■□□□ 1.13
BRAF-201ENST00000288602 ATP6V0A2Q9Y487 856 aa22.12■■□□□ 1.13
BRAF-201ENST00000288602 ROBO3Q96MS0 1386 aa22.11■■□□□ 1.13
BRAF-201ENST00000288602 TRIM75PA6NK02 468 aa22.11■■□□□ 1.13
BRAF-201ENST00000288602 NLRP5P59047 1200 aa22.11■■□□□ 1.13
BRAF-201ENST00000288602 GRAMD1CQ8IYS0 662 aa22.11■■□□□ 1.13
BRAF-201ENST00000288602 AKT1S1Q96B36 256 aa22.11■■□□□ 1.13
BRAF-201ENST00000288602 SRPRBQ9Y5M8 271 aaKnown RBP22.11■■□□□ 1.13
BRAF-201ENST00000288602 GOLGA8HP0CJ92 632 aa22.11■■□□□ 1.13
BRAF-201ENST00000288602 CDK8P49336 464 aa22.11■■□□□ 1.13
BRAF-201ENST00000288602 NLGN1Q8N2Q7 840 aa22.11■■□□□ 1.13
BRAF-201ENST00000288602 TNFRSF25Q93038 417 aa22.11■■□□□ 1.13
BRAF-201ENST00000288602 TUBE1Q9UJT0 475 aa22.11■■□□□ 1.13
BRAF-201ENST00000288602 MMP10P09238 476 aa22.1■■□□□ 1.13
BRAF-201ENST00000288602 KIF5BP33176 963 aa22.1■■□□□ 1.13
BRAF-201ENST00000288602 PICALMQ13492 652 aa22.1■■□□□ 1.13
BRAF-201ENST00000288602 PFKFB3Q16875 520 aaPredicted RBP22.1■■□□□ 1.13
BRAF-201ENST00000288602 DNTTIP2Q5QJE6 756 aaKnown RBP22.1■■□□□ 1.13
BRAF-201ENST00000288602 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms