RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 POLR3EQ9NVU0 708 aa14.09□□□□□ -0.15
SLC6A1-201ENST00000287766 TMEM131LA2VDJ0 1609 aa14.09□□□□□ -0.15
SLC6A1-201ENST00000287766 CCDC160A6NGH7 325 aa14.09□□□□□ -0.15
SLC6A1-201ENST00000287766 ARHGAP6O43182 974 aa14.09□□□□□ -0.15
SLC6A1-201ENST00000287766 FOXO4P98177 505 aa14.09□□□□□ -0.15
SLC6A1-201ENST00000287766 ATG9AQ7Z3C6 839 aa14.09□□□□□ -0.15
SLC6A1-201ENST00000287766 LCORLQ8N3X6 602 aa14.09□□□□□ -0.15
SLC6A1-201ENST00000287766 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.09□□□□□ -0.15
SLC6A1-201ENST00000287766 LDHCP07864 332 aa14.09□□□□□ -0.15
SLC6A1-201ENST00000287766 TNNI2P48788 182 aa14.09□□□□□ -0.15
SLC6A1-201ENST00000287766 SLF1Q9BQI6 1058 aa14.09□□□□□ -0.15
SLC6A1-201ENST00000287766 MROH5Q6ZUA9 1318 aa14.09□□□□□ -0.15
SLC6A1-201ENST00000287766 ANKARQ7Z5J8 1434 aa14.09□□□□□ -0.15
SLC6A1-201ENST00000287766 FAM170AA1A519 330 aa14.09□□□□□ -0.15
SLC6A1-201ENST00000287766 GNPATO15228 680 aa14.09□□□□□ -0.15
SLC6A1-201ENST00000287766 ETF1P62495 437 aaKnown RBP14.09□□□□□ -0.15
SLC6A1-201ENST00000287766 DYNLL1P63167 89 aaKnown RBP14.09□□□□□ -0.15
SLC6A1-201ENST00000287766 SPAG1Q07617 926 aa14.09□□□□□ -0.15
SLC6A1-201ENST00000287766 SF3A3Q12874 501 aaKnown RBP eCLIP14.09□□□□□ -0.15
SLC6A1-201ENST00000287766 LUC7L2Q9Y383 392 aaKnown RBP14.09□□□□□ -0.15
SLC6A1-201ENST00000287766 NPHP4O75161 1426 aaPredicted RBP14.08□□□□□ -0.16
SLC6A1-201ENST00000287766 KIF4AO95239 1232 aa14.08□□□□□ -0.16
SLC6A1-201ENST00000287766 CALM1P0DP23 149 aa14.08□□□□□ -0.16
SLC6A1-201ENST00000287766 CALM2P0DP24 149 aa14.08□□□□□ -0.16
SLC6A1-201ENST00000287766 CALM3P0DP25 149 aa14.08□□□□□ -0.16
SLC6A1-201ENST00000287766 CASP1P29466 404 aa14.08□□□□□ -0.16
SLC6A1-201ENST00000287766 HIBADHP31937 336 aaKnown RBP14.08□□□□□ -0.16
SLC6A1-201ENST00000287766 KRT9P35527 623 aa14.08□□□□□ -0.16
SLC6A1-201ENST00000287766 CYB5R4Q7L1T6 521 aa14.08□□□□□ -0.16
SLC6A1-201ENST00000287766 VPS36Q86VN1 386 aa14.08□□□□□ -0.16
SLC6A1-201ENST00000287766 AFAP1L1Q8TED9 768 aa14.08□□□□□ -0.16
SLC6A1-201ENST00000287766 GDAP1L1Q96MZ0 367 aa14.08□□□□□ -0.16
SLC6A1-201ENST00000287766 HINFPQ9BQA5 517 aa14.08□□□□□ -0.16
SLC6A1-201ENST00000287766 CPSF2Q9P2I0 782 aaKnown RBP14.08□□□□□ -0.16
SLC6A1-201ENST00000287766 LDHBP07195 334 aaKnown RBP14.08□□□□□ -0.16
SLC6A1-201ENST00000287766 RBM6P78332 1123 aaKnown RBP14.08□□□□□ -0.16
SLC6A1-201ENST00000287766 CHRNDQ07001 517 aa14.08□□□□□ -0.16
SLC6A1-201ENST00000287766 EHBP1Q8NDI1 1231 aa14.08□□□□□ -0.16
SLC6A1-201ENST00000287766 PPP1R13BQ96KQ4 1090 aa14.08□□□□□ -0.16
SLC6A1-201ENST00000287766 UBE3CQ15386 1083 aa14.08□□□□□ -0.16
SLC6A1-201ENST00000287766 TSG101Q99816 390 aa14.08□□□□□ -0.16
SLC6A1-201ENST00000287766 PAIP2Q9BPZ3 127 aaKnown RBP14.08□□□□□ -0.16
SLC6A1-201ENST00000287766 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.08□□□□□ -0.16
SLC6A1-201ENST00000287766 RAB34Q9BZG1 259 aa14.08□□□□□ -0.16
SLC6A1-201ENST00000287766 WDR17Q8IZU2 1322 aa14.07□□□□□ -0.16
SLC6A1-201ENST00000287766 SMIM23A6NLE4 172 aa14.07□□□□□ -0.16
SLC6A1-201ENST00000287766 RIMBP2O15034 1052 aa14.07□□□□□ -0.16
SLC6A1-201ENST00000287766 CALML3P27482 149 aa14.07□□□□□ -0.16
SLC6A1-201ENST00000287766 RASGRF1Q13972 1273 aa14.07□□□□□ -0.16
SLC6A1-201ENST00000287766 TPTE2Q6XPS3 522 aa14.07□□□□□ -0.16
SLC6A1-201ENST00000287766 GPKOWQ92917 476 aaPredicted RBP eCLIP14.07□□□□□ -0.16
SLC6A1-201ENST00000287766 PSMB7Q99436 277 aa14.07□□□□□ -0.16
SLC6A1-201ENST00000287766 CSRNP2Q9H175 543 aa14.07□□□□□ -0.16
SLC6A1-201ENST00000287766 CEP83Q9Y592 693 aa14.07□□□□□ -0.16
SLC6A1-201ENST00000287766 USP42Q9H9J4 1324 aaKnown RBP14.07□□□□□ -0.16
SLC6A1-201ENST00000287766 AP5Z1O43299 807 aa14.07□□□□□ -0.16
SLC6A1-201ENST00000287766 AMPD3Q01432 767 aa14.07□□□□□ -0.16
SLC6A1-201ENST00000287766 TFAP4Q01664 338 aa14.07□□□□□ -0.16
SLC6A1-201ENST00000287766 PCDHB6Q9Y5E3 794 aa14.07□□□□□ -0.16
SLC6A1-201ENST00000287766 HPDP32754 393 aaPredicted RBP14.07□□□□□ -0.16
SLC6A1-201ENST00000287766 DENND2AQ9ULE3 1009 aa14.07□□□□□ -0.16
SLC6A1-201ENST00000287766 CYLC1P35663 651 aaPredicted RBP14.07□□□□□ -0.16
SLC6A1-201ENST00000287766 CCDC122Q5T0U0 273 aa14.07□□□□□ -0.16
SLC6A1-201ENST00000287766 MYCBPQ99417 103 aaPredicted RBP14.07□□□□□ -0.16
SLC6A1-201ENST00000287766 PPP2R2CQ9Y2T4 447 aa14.07□□□□□ -0.16
SLC6A1-201ENST00000287766 KIF28PB7ZC32 967 aa14.06□□□□□ -0.16
SLC6A1-201ENST00000287766 SH2B2O14492 632 aaPredicted RBP14.06□□□□□ -0.16
SLC6A1-201ENST00000287766 GOLGA8HP0CJ92 632 aa14.06□□□□□ -0.16
SLC6A1-201ENST00000287766 CHMP4BP1P59074 171 aa14.06□□□□□ -0.16
SLC6A1-201ENST00000287766 WWC2Q6AWC2 1192 aa14.06□□□□□ -0.16
SLC6A1-201ENST00000287766 MAPKAPK5Q8IW41 473 aa14.06□□□□□ -0.16
SLC6A1-201ENST00000287766 RASGRP4Q8TDF6 673 aa14.06□□□□□ -0.16
SLC6A1-201ENST00000287766 SAMSN1Q9NSI8 373 aaKnown RBP14.06□□□□□ -0.16
SLC6A1-201ENST00000287766 CEMIPQ8WUJ3 1361 aa14.06□□□□□ -0.16
SLC6A1-201ENST00000287766 CFAP58Q5T655 872 aa14.06□□□□□ -0.16
SLC6A1-201ENST00000287766 CNGA4Q8IV77 575 aa14.06□□□□□ -0.16
SLC6A1-201ENST00000287766 CLGNO14967 610 aa14.06□□□□□ -0.16
SLC6A1-201ENST00000287766 CDC27P30260 824 aa14.06□□□□□ -0.16
SLC6A1-201ENST00000287766 VAV2P52735 878 aa14.06□□□□□ -0.16
SLC6A1-201ENST00000287766 TBC1D8BQ0IIM8 1120 aa14.06□□□□□ -0.16
SLC6A1-201ENST00000287766 PARP10Q53GL7 1025 aa14.06□□□□□ -0.16
SLC6A1-201ENST00000287766 ANKS4BQ8N8V4 417 aa14.06□□□□□ -0.16
SLC6A1-201ENST00000287766 CCDC42Q96M95 316 aa14.06□□□□□ -0.16
SLC6A1-201ENST00000287766 CEP63Q96MT8 703 aa14.06□□□□□ -0.16
SLC6A1-201ENST00000287766 HGSO14964 777 aaPredicted RBP14.05□□□□□ -0.16
SLC6A1-201ENST00000287766 TXKP42681 527 aa14.05□□□□□ -0.16
SLC6A1-201ENST00000287766 ST3GAL1Q11201 340 aa14.05□□□□□ -0.16
SLC6A1-201ENST00000287766 PTGDRQ13258 359 aa14.05□□□□□ -0.16
SLC6A1-201ENST00000287766 UTP14CQ5TAP6 766 aaKnown RBP14.05□□□□□ -0.16
SLC6A1-201ENST00000287766 PNMA8AQ86V59 439 aaPredicted RBP14.05□□□□□ -0.16
SLC6A1-201ENST00000287766 FMR1NBQ8N0W7 255 aaPredicted RBP14.05□□□□□ -0.16
SLC6A1-201ENST00000287766 FOXN1O15353 648 aa14.05□□□□□ -0.16
SLC6A1-201ENST00000287766 NEBLO76041 1014 aa14.05□□□□□ -0.16
SLC6A1-201ENST00000287766 KIF5AQ12840 1032 aa14.05□□□□□ -0.16
SLC6A1-201ENST00000287766 ARFGAP2Q8N6H7 521 aa14.05□□□□□ -0.16
SLC6A1-201ENST00000287766 SYMPKQ92797 1274 aaKnown RBP14.05□□□□□ -0.16
SLC6A1-201ENST00000287766 SELENOSQ9BQE4 189 aa14.05□□□□□ -0.16
SLC6A1-201ENST00000287766 PPP1R12CQ9BZL4 782 aa14.05□□□□□ -0.16
SLC6A1-201ENST00000287766 TMEM232C9JQI7 657 aa14.05□□□□□ -0.16
SLC6A1-201ENST00000287766 GNAQP50148 359 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms