RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 CUTAO60888 179 aa12.93□□□□□ -0.34
SCLT1-201ENST00000281142 RHOXF2BP0C7M4 288 aa12.93□□□□□ -0.34
SCLT1-201ENST00000281142 R3HDM1Q15032 1099 aaKnown RBP12.93□□□□□ -0.34
SCLT1-201ENST00000281142 PWP2Q15269 919 aaKnown RBP12.93□□□□□ -0.34
SCLT1-201ENST00000281142 BEND6Q5SZJ8 279 aaPredicted RBP12.93□□□□□ -0.34
SCLT1-201ENST00000281142 RALYLQ86SE5 291 aaKnown RBP12.93□□□□□ -0.34
SCLT1-201ENST00000281142 SRLQ86TD4 932 aa12.93□□□□□ -0.34
SCLT1-201ENST00000281142 EXOC4Q96A65 974 aa12.93□□□□□ -0.34
SCLT1-201ENST00000281142 SETDB2Q96T68 719 aa12.93□□□□□ -0.34
SCLT1-201ENST00000281142 RHOXF2Q9BQY4 288 aa12.93□□□□□ -0.34
SCLT1-201ENST00000281142 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.93□□□□□ -0.34
SCLT1-201ENST00000281142 PLEKHA4Q9H4M7 779 aa12.93□□□□□ -0.34
SCLT1-201ENST00000281142 FAN1Q9Y2M0 1017 aa12.93□□□□□ -0.34
SCLT1-201ENST00000281142 RRP15Q9Y3B9 282 aaKnown RBP12.93□□□□□ -0.34
SCLT1-201ENST00000281142 NTSR2O95665 410 aa12.92□□□□□ -0.34
SCLT1-201ENST00000281142 ZNF18P17022 549 aa12.92□□□□□ -0.34
SCLT1-201ENST00000281142 TM4SF1P30408 202 aa12.92□□□□□ -0.34
SCLT1-201ENST00000281142 MDM2Q00987 491 aaPredicted RBP12.92□□□□□ -0.34
SCLT1-201ENST00000281142 ICE2Q659A1 982 aa12.92□□□□□ -0.34
SCLT1-201ENST00000281142 FBXL16Q8N461 479 aa12.92□□□□□ -0.34
SCLT1-201ENST00000281142 NCOA7Q8NI08 942 aa12.92□□□□□ -0.34
SCLT1-201ENST00000281142 GOLGA5Q8TBA6 731 aa12.92□□□□□ -0.34
SCLT1-201ENST00000281142 ABCB6Q9NP58 842 aa12.92□□□□□ -0.34
SCLT1-201ENST00000281142 CCDC151A5D8V7 595 aa12.92□□□□□ -0.34
SCLT1-201ENST00000281142 COBLO75128 1261 aa12.92□□□□□ -0.34
SCLT1-201ENST00000281142 PPP6R2O75170 966 aa12.92□□□□□ -0.34
SCLT1-201ENST00000281142 PARP10Q53GL7 1025 aa12.92□□□□□ -0.34
SCLT1-201ENST00000281142 ZBTB38Q8NAP3 1195 aaPredicted RBP12.92□□□□□ -0.34
SCLT1-201ENST00000281142 SERTAD1Q9UHV2 236 aa12.92□□□□□ -0.34
SCLT1-201ENST00000281142 TRMT112Q9UI30 125 aaKnown RBP12.92□□□□□ -0.34
SCLT1-201ENST00000281142 RANBP6O60518 1105 aaKnown RBP12.92□□□□□ -0.34
SCLT1-201ENST00000281142 ACTN2P35609 894 aa12.92□□□□□ -0.34
SCLT1-201ENST00000281142 USP49Q70CQ1 688 aa12.92□□□□□ -0.34
SCLT1-201ENST00000281142 SRGAP1Q7Z6B7 1085 aa12.92□□□□□ -0.34
SCLT1-201ENST00000281142 TBC1D10CQ8IV04 446 aa12.92□□□□□ -0.34
SCLT1-201ENST00000281142 RAI14Q9P0K7 980 aa12.92□□□□□ -0.34
SCLT1-201ENST00000281142 LAMB2P55268 1798 aa12.91□□□□□ -0.34
SCLT1-201ENST00000281142 MYH3P11055 1940 aa12.91□□□□□ -0.34
SCLT1-201ENST00000281142 POLR2DO15514 142 aaKnown RBP12.91□□□□□ -0.34
SCLT1-201ENST00000281142 CASP1P29466 404 aa12.91□□□□□ -0.34
SCLT1-201ENST00000281142 ZAP70P43403 619 aa12.91□□□□□ -0.34
SCLT1-201ENST00000281142 METAP2P50579 478 aaKnown RBP eCLIP12.91□□□□□ -0.34
SCLT1-201ENST00000281142 STX17P56962 302 aa12.91□□□□□ -0.34
SCLT1-201ENST00000281142 DDR1Q08345 913 aa12.91□□□□□ -0.34
SCLT1-201ENST00000281142 SLC9C2Q5TAH2 1124 aa12.91□□□□□ -0.34
SCLT1-201ENST00000281142 PCCAP05165 728 aaPredicted RBP12.91□□□□□ -0.34
SCLT1-201ENST00000281142 ZNF569Q5MCW4 686 aa12.91□□□□□ -0.34
SCLT1-201ENST00000281142 TTC39AQ5SRH9 613 aa12.91□□□□□ -0.34
SCLT1-201ENST00000281142 CDC5LQ99459 802 aaKnown RBP12.91□□□□□ -0.34
SCLT1-201ENST00000281142 GOLGA6L9A6NEM1 432 aa12.9□□□□□ -0.34
SCLT1-201ENST00000281142 EYA2O00167 538 aa12.9□□□□□ -0.34
SCLT1-201ENST00000281142 ZNF213O14771 459 aa12.9□□□□□ -0.34
SCLT1-201ENST00000281142 GPAA1O43292 621 aa12.9□□□□□ -0.34
SCLT1-201ENST00000281142 ATP2B1P20020 1258 aa12.9□□□□□ -0.34
SCLT1-201ENST00000281142 VSNL1P62760 191 aa12.9□□□□□ -0.34
SCLT1-201ENST00000281142 RBL2Q08999 1139 aa12.9□□□□□ -0.34
SCLT1-201ENST00000281142 POSTNQ15063 836 aa12.9□□□□□ -0.34
SCLT1-201ENST00000281142 KLHL10Q6JEL2 608 aa12.9□□□□□ -0.34
SCLT1-201ENST00000281142 NLGN1Q8N2Q7 840 aa12.9□□□□□ -0.34
SCLT1-201ENST00000281142 ADGRG1Q9Y653 693 aa12.9□□□□□ -0.34
SCLT1-201ENST00000281142 NRXN2Q9P2S2 1712 aa12.9□□□□□ -0.34
SCLT1-201ENST00000281142 FAM237AA0A1B0GTK4 181 aa12.9□□□□□ -0.34
SCLT1-201ENST00000281142 POLRMTO00411 1230 aaKnown RBP12.9□□□□□ -0.34
SCLT1-201ENST00000281142 ZMYM6O95789 1325 aa12.9□□□□□ -0.34
SCLT1-201ENST00000281142 GUCY1A2P33402 732 aa12.9□□□□□ -0.34
SCLT1-201ENST00000281142 IL15P40933 162 aaPredicted RBP12.9□□□□□ -0.34
SCLT1-201ENST00000281142 BRD3Q15059 726 aa12.9□□□□□ -0.34
SCLT1-201ENST00000281142 CCDC24Q8N4L8 307 aa12.9□□□□□ -0.34
SCLT1-201ENST00000281142 ACRBPQ8NEB7 543 aa12.9□□□□□ -0.34
SCLT1-201ENST00000281142 B4E1Z4 1266 aa12.9□□□□□ -0.35
SCLT1-201ENST00000281142 CCDC175P0C221 793 aa12.9□□□□□ -0.35
SCLT1-201ENST00000281142 ERFEQ4G0M1 354 aa12.9□□□□□ -0.35
SCLT1-201ENST00000281142 JAKMIP3Q5VZ66 844 aa12.9□□□□□ -0.35
SCLT1-201ENST00000281142 CTR9Q6PD62 1173 aa12.9□□□□□ -0.35
SCLT1-201ENST00000281142 NBPF5PQ86XG9 351 aaPredicted RBP12.9□□□□□ -0.35
SCLT1-201ENST00000281142 JMYQ8N9B5 988 aa12.9□□□□□ -0.35
SCLT1-201ENST00000281142 RNF216Q9NWF9 866 aaPredicted RBP12.9□□□□□ -0.35
SCLT1-201ENST00000281142 KCNJ14Q9UNX9 436 aa12.9□□□□□ -0.35
SCLT1-201ENST00000281142 ECM29Q5VYK3 1845 aa12.89□□□□□ -0.35
SCLT1-201ENST00000281142 GOLGB1Q14789 3259 aaKnown RBP12.89□□□□□ -0.35
SCLT1-201ENST00000281142 BTBD18B2RXH4 712 aa12.89□□□□□ -0.35
SCLT1-201ENST00000281142 TOB1P50616 345 aaPredicted RBP12.89□□□□□ -0.35
SCLT1-201ENST00000281142 NR1I3Q14994 352 aa12.89□□□□□ -0.35
SCLT1-201ENST00000281142 SLC35F6Q8N357 371 aa12.89□□□□□ -0.35
SCLT1-201ENST00000281142 CCDC82Q8N4S0 544 aa12.89□□□□□ -0.35
SCLT1-201ENST00000281142 PSD3Q9NYI0 1048 aa12.89□□□□□ -0.35
SCLT1-201ENST00000281142 CWC15Q9P013 229 aaKnown RBP12.89□□□□□ -0.35
SCLT1-201ENST00000281142 TNRC6CQ9HCJ0 1690 aaKnown RBP12.89□□□□□ -0.35
SCLT1-201ENST00000281142 SRCAPQ6ZRS2 3230 aa12.89□□□□□ -0.35
SCLT1-201ENST00000281142 AKR1B15C9JRZ8 316 aaPredicted RBP12.89□□□□□ -0.35
SCLT1-201ENST00000281142 MMP10P09238 476 aa12.89□□□□□ -0.35
SCLT1-201ENST00000281142 PSEN1P49768 467 aa12.89□□□□□ -0.35
SCLT1-201ENST00000281142 MMP14P50281 582 aa12.89□□□□□ -0.35
SCLT1-201ENST00000281142 SKIDA1Q1XH10 827 aa12.89□□□□□ -0.35
SCLT1-201ENST00000281142 KIF4BQ2VIQ3 1234 aa12.89□□□□□ -0.35
SCLT1-201ENST00000281142 APOA5Q6Q788 366 aa12.89□□□□□ -0.35
SCLT1-201ENST00000281142 SMYD4Q8IYR2 804 aaPredicted RBP12.89□□□□□ -0.35
SCLT1-201ENST00000281142 XAGE2Q96GT9 111 aa12.89□□□□□ -0.35
SCLT1-201ENST00000281142 CDC23Q9UJX2 597 aa12.89□□□□□ -0.35
SCLT1-201ENST00000281142 L1RE1Q9UN81 338 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms