RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 SLC3A2P08195 630 aaKnown RBP24.32■■□□□ 1.48
YBX3-202ENST00000279550 GUCY1A2P33402 732 aa24.32■■□□□ 1.48
YBX3-202ENST00000279550 MMP14P50281 582 aa24.32■■□□□ 1.48
YBX3-202ENST00000279550 RCAN1P53805 252 aa24.32■■□□□ 1.48
YBX3-202ENST00000279550 NFIAQ12857 509 aa24.32■■□□□ 1.48
YBX3-202ENST00000279550 DLGAP5Q15398 846 aa24.32■■□□□ 1.48
YBX3-202ENST00000279550 NBPF11Q86T75 865 aa24.32■■□□□ 1.48
YBX3-202ENST00000279550 FANCBQ8NB91 859 aa24.32■■□□□ 1.48
YBX3-202ENST00000279550 RGS22Q8NE09 1264 aa24.32■■□□□ 1.48
YBX3-202ENST00000279550 NUP133Q8WUM0 1156 aa24.32■■□□□ 1.48
YBX3-202ENST00000279550 TDRD3Q9H7E2 651 aaKnown RBP24.32■■□□□ 1.48
YBX3-202ENST00000279550 TAOK2Q9UL54 1235 aa24.32■■□□□ 1.48
YBX3-202ENST00000279550 GJA3Q9Y6H8 435 aa24.32■■□□□ 1.48
YBX3-202ENST00000279550 ROBO3Q96MS0 1386 aa24.32■■□□□ 1.48
YBX3-202ENST00000279550 PLCD1P51178 756 aa24.31■■□□□ 1.48
YBX3-202ENST00000279550 FAM47AQ5JRC9 791 aa24.31■■□□□ 1.48
YBX3-202ENST00000279550 CMTR1Q8N1G2 835 aaKnown RBP24.31■■□□□ 1.48
YBX3-202ENST00000279550 MTMR14Q8NCE2 650 aa24.31■■□□□ 1.48
YBX3-202ENST00000279550 RNF214Q8ND24 703 aa24.31■■□□□ 1.48
YBX3-202ENST00000279550 DPF2Q92785 391 aa24.31■■□□□ 1.48
YBX3-202ENST00000279550 FUCA2Q9BTY2 467 aa24.31■■□□□ 1.48
YBX3-202ENST00000279550 IDI2Q9BXS1 227 aa24.31■■□□□ 1.48
YBX3-202ENST00000279550 DACT1Q9NYF0 836 aa24.31■■□□□ 1.48
YBX3-202ENST00000279550 NMT2O60551 498 aa24.3■■□□□ 1.48
YBX3-202ENST00000279550 GMPSP49915 693 aaPredicted RBP24.3■■□□□ 1.48
YBX3-202ENST00000279550 CACNB3P54284 484 aa24.3■■□□□ 1.48
YBX3-202ENST00000279550 BRAPQ7Z569 592 aa24.3■■□□□ 1.48
YBX3-202ENST00000279550 BICD2Q8TD16 824 aa24.3■■□□□ 1.48
YBX3-202ENST00000279550 OSBPL5Q9H0X9 879 aaPredicted RBP24.3■■□□□ 1.48
YBX3-202ENST00000279550 RTEL1Q9NZ71 1219 aa24.3■■□□□ 1.48
YBX3-202ENST00000279550 CLIC4Q9Y696 253 aa24.3■■□□□ 1.48
YBX3-202ENST00000279550 GPR162Q16538 588 aa24.3■■□□□ 1.48
YBX3-202ENST00000279550 MYSM1Q5VVJ2 828 aa24.3■■□□□ 1.48
YBX3-202ENST00000279550 DYNLL2Q96FJ2 89 aa24.3■■□□□ 1.48
YBX3-202ENST00000279550 RNF181Q9P0P0 153 aa24.3■■□□□ 1.48
YBX3-202ENST00000279550 ZNF280AP59817 542 aaPredicted RBP24.29■■□□□ 1.48
YBX3-202ENST00000279550 PDE4BQ07343 736 aa24.29■■□□□ 1.48
YBX3-202ENST00000279550 IFIT1BQ5T764 474 aaKnown RBP24.29■■□□□ 1.48
YBX3-202ENST00000279550 CRACR2BQ8N4Y2 399 aaPredicted RBP24.29■■□□□ 1.48
YBX3-202ENST00000279550 MYOZ2Q9NPC6 264 aa24.29■■□□□ 1.48
YBX3-202ENST00000279550 SHTN1A0MZ66 631 aa24.28■■□□□ 1.48
YBX3-202ENST00000279550 NR1I2O75469 434 aa24.28■■□□□ 1.48
YBX3-202ENST00000279550 NPM3O75607 178 aaKnown RBP24.28■■□□□ 1.48
YBX3-202ENST00000279550 IQCA1Q86XH1 822 aa24.28■■□□□ 1.48
YBX3-202ENST00000279550 CCDC82Q8N4S0 544 aa24.28■■□□□ 1.48
YBX3-202ENST00000279550 NUP62CLQ9H1M0 184 aa24.28■■□□□ 1.48
YBX3-202ENST00000279550 FAM198AQ9UFP1 575 aa24.28■■□□□ 1.48
YBX3-202ENST00000279550 MYH1P12882 1939 aa24.28■■□□□ 1.48
YBX3-202ENST00000279550 ZBED3Q96IU2 234 aaPredicted RBP24.27■■□□□ 1.48
YBX3-202ENST00000279550 GOLPH3LQ9H4A5 285 aa24.27■■□□□ 1.48
YBX3-202ENST00000279550 CLSTN2Q9H4D0 955 aa24.27■■□□□ 1.48
YBX3-202ENST00000279550 CAMK4Q16566 473 aa24.27■■□□□ 1.48
YBX3-202ENST00000279550 MICALL2Q8IY33 904 aa24.27■■□□□ 1.48
YBX3-202ENST00000279550 GPC2Q8N158 579 aa24.27■■□□□ 1.48
YBX3-202ENST00000279550 PPP1R9BQ96SB3 815 aa24.27■■□□□ 1.48
YBX3-202ENST00000279550 DDX19AQ9NUU7 478 aaKnown RBP24.27■■□□□ 1.48
YBX3-202ENST00000279550 CCDC196A0A1B0GTZ2 297 aa24.26■■□□□ 1.47
YBX3-202ENST00000279550 TCP10Q12799 353 aa24.26■■□□□ 1.47
YBX3-202ENST00000279550 LINC00301Q8NCQ3 95 aa24.26■■□□□ 1.47
YBX3-202ENST00000279550 TMOD2Q9NZR1 351 aa24.26■■□□□ 1.47
YBX3-202ENST00000279550 CNOT7Q9UIV1 285 aaKnown RBP24.26■■□□□ 1.47
YBX3-202ENST00000279550 WNT10BO00744 389 aa24.25■■□□□ 1.47
YBX3-202ENST00000279550 FUT2Q10981 343 aa24.25■■□□□ 1.47
YBX3-202ENST00000279550 TROAPQ12815 778 aa24.25■■□□□ 1.47
YBX3-202ENST00000279550 SPDYE2Q495Y8 402 aa24.25■■□□□ 1.47
YBX3-202ENST00000279550 C9orf131Q5VYM1 1079 aa24.25■■□□□ 1.47
YBX3-202ENST00000279550 C16orf86Q6ZW13 317 aa24.25■■□□□ 1.47
YBX3-202ENST00000279550 CATIPQ7Z7H3 387 aa24.25■■□□□ 1.47
YBX3-202ENST00000279550 ZFPM1Q8IX07 1006 aa24.25■■□□□ 1.47
YBX3-202ENST00000279550 CCAR1Q8IX12 1150 aaKnown RBP24.25■■□□□ 1.47
YBX3-202ENST00000279550 ZNF70Q9UC06 446 aaPredicted RBP24.25■■□□□ 1.47
YBX3-202ENST00000279550 CLRN2A0PK11 232 aa24.24■■□□□ 1.47
YBX3-202ENST00000279550 PLEKHA8P1O95397 391 aa24.24■■□□□ 1.47
YBX3-202ENST00000279550 CCDC173Q0VFZ6 552 aa24.24■■□□□ 1.47
YBX3-202ENST00000279550 TRIM29Q14134 588 aa24.24■■□□□ 1.47
YBX3-202ENST00000279550 TRIM22Q8IYM9 498 aa24.24■■□□□ 1.47
YBX3-202ENST00000279550 WASF1Q92558 559 aa24.24■■□□□ 1.47
YBX3-202ENST00000279550 POLR3EQ9NVU0 708 aa24.24■■□□□ 1.47
YBX3-202ENST00000279550 PCDHA7Q9UN72 937 aa24.24■■□□□ 1.47
YBX3-202ENST00000279550 MYO1BO43795 1136 aa24.24■■□□□ 1.47
YBX3-202ENST00000279550 ENTPD3O75355 529 aa24.24■■□□□ 1.47
YBX3-202ENST00000279550 ME1P48163 572 aa24.24■■□□□ 1.47
YBX3-202ENST00000279550 MAP3K11Q16584 847 aa24.24■■□□□ 1.47
YBX3-202ENST00000279550 RCSD1Q6JBY9 416 aa24.24■■□□□ 1.47
YBX3-202ENST00000279550 SLC44A5Q8NCS7 719 aa24.24■■□□□ 1.47
YBX3-202ENST00000279550 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.24■■□□□ 1.47
YBX3-202ENST00000279550 DHX36Q9H2U1 1008 aaKnown RBP24.24■■□□□ 1.47
YBX3-202ENST00000279550 MKNK2Q9HBH9 465 aa24.24■■□□□ 1.47
YBX3-202ENST00000279550 ZNF287Q9HBT7 754 aa24.24■■□□□ 1.47
YBX3-202ENST00000279550 KCNJ14Q9UNX9 436 aa24.24■■□□□ 1.47
YBX3-202ENST00000279550 TSPY2A6NKD2 308 aa24.23■■□□□ 1.47
YBX3-202ENST00000279550 GRIN3BO60391 1043 aa24.23■■□□□ 1.47
YBX3-202ENST00000279550 DDAH1O94760 285 aa24.23■■□□□ 1.47
YBX3-202ENST00000279550 DEXIO95424 95 aa24.23■■□□□ 1.47
YBX3-202ENST00000279550 YEATS4O95619 227 aa24.23■■□□□ 1.47
YBX3-202ENST00000279550 EGFRP00533 1210 aa24.23■■□□□ 1.47
YBX3-202ENST00000279550 U2AF2P26368 475 aaKnown RBP eCLIP24.23■■□□□ 1.472e-8■■□□□ 14.4
YBX3-202ENST00000279550 NT5C2P49902 561 aa24.23■■□□□ 1.47
YBX3-202ENST00000279550 STK38Q15208 465 aa24.23■■□□□ 1.47
YBX3-202ENST00000279550 NBPF9Q3BBW0 867 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms