RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 ORC4O43929 436 aa15.51■□□□□ 0.07
ACER3-201ENST00000278544 SEPT2Q15019 361 aa15.51■□□□□ 0.07
ACER3-201ENST00000278544 GRIPAP1Q4V328 841 aa15.51■□□□□ 0.07
ACER3-201ENST00000278544 ALDH8A1Q9H2A2 487 aaPredicted RBP15.51■□□□□ 0.07
ACER3-201ENST00000278544 GPCPD1Q9NPB8 672 aa15.51■□□□□ 0.07
ACER3-201ENST00000278544 LIFRP42702 1097 aa15.5■□□□□ 0.07
ACER3-201ENST00000278544 CERKLQ49MI3 558 aaPredicted RBP15.5■□□□□ 0.07
ACER3-201ENST00000278544 ANGEL2Q5VTE6 544 aaKnown RBP15.5■□□□□ 0.07
ACER3-201ENST00000278544 ALG1Q9BT22 464 aa15.5■□□□□ 0.07
ACER3-201ENST00000278544 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.5■□□□□ 0.07
ACER3-201ENST00000278544 GH2P01242 217 aa15.5■□□□□ 0.07
ACER3-201ENST00000278544 C8orf76Q96K31 380 aa15.5■□□□□ 0.07
ACER3-201ENST00000278544 PI4KBQ9UBF8 816 aa15.5■□□□□ 0.07
ACER3-201ENST00000278544 HACL1Q9UJ83 578 aa15.5■□□□□ 0.07
ACER3-201ENST00000278544 WDR33Q9C0J8 1336 aaKnown RBP15.5■□□□□ 0.07
ACER3-201ENST00000278544 KIF4BQ2VIQ3 1234 aa15.5■□□□□ 0.07
ACER3-201ENST00000278544 AGBL3Q8NEM8 1001 aa15.5■□□□□ 0.07
ACER3-201ENST00000278544 CTCFLQ8NI51 663 aaPredicted RBP15.5■□□□□ 0.07
ACER3-201ENST00000278544 GBP4Q96PP9 640 aa15.5■□□□□ 0.07
ACER3-201ENST00000278544 FZD9O00144 591 aa15.49■□□□□ 0.07
ACER3-201ENST00000278544 F13A1P00488 732 aa15.49■□□□□ 0.07
ACER3-201ENST00000278544 GNL2Q13823 731 aaKnown RBP15.49■□□□□ 0.07
ACER3-201ENST00000278544 CPLX2Q6PUV4 134 aaKnown RBP15.49■□□□□ 0.07
ACER3-201ENST00000278544 SGMS1Q86VZ5 419 aa15.49■□□□□ 0.07
ACER3-201ENST00000278544 NUP88Q99567 741 aaPredicted RBP15.49■□□□□ 0.07
ACER3-201ENST00000278544 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.49■□□□□ 0.07
ACER3-201ENST00000278544 H7C1D1 291 aa15.49■□□□□ 0.07
ACER3-201ENST00000278544 SLC16A2P36021 539 aa15.49■□□□□ 0.07
ACER3-201ENST00000278544 SNAP25P60880 206 aa15.49■□□□□ 0.07
ACER3-201ENST00000278544 TROAPQ12815 778 aa15.49■□□□□ 0.07
ACER3-201ENST00000278544 VPS54Q9P1Q0 977 aa15.49■□□□□ 0.07
ACER3-201ENST00000278544 MYH1P12882 1939 aa15.49■□□□□ 0.07
ACER3-201ENST00000278544 MYO3BQ8WXR4 1341 aa15.48■□□□□ 0.07
ACER3-201ENST00000278544 USP17L5A8MUK1 530 aa15.48■□□□□ 0.07
ACER3-201ENST00000278544 EAPPQ56P03 285 aaPredicted RBP15.48■□□□□ 0.07
ACER3-201ENST00000278544 KCTD1Q719H9 257 aa15.48■□□□□ 0.07
ACER3-201ENST00000278544 AKAP17AQ02040 695 aaKnown RBP15.48■□□□□ 0.07
ACER3-201ENST00000278544 SSRP1Q08945 709 aaKnown RBP15.48■□□□□ 0.07
ACER3-201ENST00000278544 GPKOWQ92917 476 aaPredicted RBP eCLIP15.48■□□□□ 0.07
ACER3-201ENST00000278544 ZNF287Q9HBT7 754 aa15.48■□□□□ 0.07
ACER3-201ENST00000278544 DGKZQ13574 1117 aa15.48■□□□□ 0.07
ACER3-201ENST00000278544 GGA3Q9NZ52 723 aa15.48■□□□□ 0.07
ACER3-201ENST00000278544 KIAA1551Q9HCM1 1747 aa15.48■□□□□ 0.07
ACER3-201ENST00000278544 HDLBPQ00341 1268 aaKnown RBP15.47■□□□□ 0.07
ACER3-201ENST00000278544 GABPAQ06546 454 aa15.47■□□□□ 0.07
ACER3-201ENST00000278544 SPDYE2Q495Y8 402 aa15.47■□□□□ 0.07
ACER3-201ENST00000278544 NBPF12Q5TAG4 269 aaPredicted RBP15.47■□□□□ 0.07
ACER3-201ENST00000278544 SRBD1Q8N5C6 995 aaKnown RBP15.47■□□□□ 0.07
ACER3-201ENST00000278544 GADD45BO75293 160 aaPredicted RBP15.47■□□□□ 0.07
ACER3-201ENST00000278544 IKQ13123 557 aaPredicted RBP15.47■□□□□ 0.07
ACER3-201ENST00000278544 NTRK3Q16288 839 aa15.47■□□□□ 0.07
ACER3-201ENST00000278544 CCDC96Q2M329 555 aa15.47■□□□□ 0.07
ACER3-201ENST00000278544 DLEC1Q9Y238 1755 aa15.47■□□□□ 0.07
ACER3-201ENST00000278544 FGRP09769 529 aa15.47■□□□□ 0.07
ACER3-201ENST00000278544 TAL1P17542 331 aaPredicted RBP15.47■□□□□ 0.07
ACER3-201ENST00000278544 IDI2Q9BXS1 227 aa15.47■□□□□ 0.07
ACER3-201ENST00000278544 KIF13BQ9NQT8 1826 aa15.47■□□□□ 0.07
ACER3-201ENST00000278544 HIRAP54198 1017 aaPredicted RBP15.46■□□□□ 0.07
ACER3-201ENST00000278544 FKBP1AP62942 108 aaKnown RBP15.46■□□□□ 0.07
ACER3-201ENST00000278544 TTBK2Q6IQ55 1244 aa15.46■□□□□ 0.07
ACER3-201ENST00000278544 CERS3Q8IU89 383 aa15.46■□□□□ 0.07
ACER3-201ENST00000278544 TMTC2Q8N394 836 aa15.46■□□□□ 0.07
ACER3-201ENST00000278544 SMARCC2Q8TAQ2 1214 aa15.46■□□□□ 0.07
ACER3-201ENST00000278544 DEFB129Q9H1M3 183 aa15.46■□□□□ 0.07
ACER3-201ENST00000278544 ECE1P42892 770 aa15.46■□□□□ 0.07
ACER3-201ENST00000278544 NEDD1Q8NHV4 660 aa15.46■□□□□ 0.07
ACER3-201ENST00000278544 EEF2P13639 858 aaKnown RBP15.46■□□□□ 0.06
ACER3-201ENST00000278544 ABCB5Q2M3G0 1257 aa15.46■□□□□ 0.06
ACER3-201ENST00000278544 TRIM22Q8IYM9 498 aa15.46■□□□□ 0.06
ACER3-201ENST00000278544 GLIS2Q9BZE0 524 aaPredicted RBP15.46■□□□□ 0.06
ACER3-201ENST00000278544 MAST2Q6P0Q8 1798 aa15.45■□□□□ 0.06
ACER3-201ENST00000278544 PDCP20941 246 aa15.45■□□□□ 0.06
ACER3-201ENST00000278544 EVCP57679 992 aa15.45■□□□□ 0.06
ACER3-201ENST00000278544 HMGN5P82970 282 aaKnown RBP15.45■□□□□ 0.06
ACER3-201ENST00000278544 MTMR4Q9NYA4 1195 aa15.45■□□□□ 0.06
ACER3-201ENST00000278544 DDX49Q9Y6V7 483 aaKnown RBP15.45■□□□□ 0.06
ACER3-201ENST00000278544 FER1L6Q2WGJ9 1857 aa15.45■□□□□ 0.06
ACER3-201ENST00000278544 NAV1Q8NEY1 1877 aa15.45■□□□□ 0.06
ACER3-201ENST00000278544 TCHHQ07283 1943 aa15.45■□□□□ 0.06
ACER3-201ENST00000278544 CNTNAP1P78357 1384 aa15.45■□□□□ 0.06
ACER3-201ENST00000278544 RBM27Q9P2N5 1060 aaKnown RBP15.45■□□□□ 0.06
ACER3-201ENST00000278544 KIF28PB7ZC32 967 aa15.44■□□□□ 0.06
ACER3-201ENST00000278544 NR5A1Q13285 461 aa15.44■□□□□ 0.06
ACER3-201ENST00000278544 ACER1Q8TDN7 264 aa15.44■□□□□ 0.06
ACER3-201ENST00000278544 DHX36Q9H2U1 1008 aaKnown RBP15.44■□□□□ 0.06
ACER3-201ENST00000278544 CDK5RAP2Q96SN8 1893 aa15.44■□□□□ 0.06
ACER3-201ENST00000278544 BRCA1P38398 1863 aaKnown RBP15.44■□□□□ 0.06
ACER3-201ENST00000278544 ICA1Q05084 483 aa15.44■□□□□ 0.06
ACER3-201ENST00000278544 KRT40Q6A162 431 aa15.44■□□□□ 0.06
ACER3-201ENST00000278544 GPRC5DQ9NZD1 345 aa15.44■□□□□ 0.06
ACER3-201ENST00000278544 GOLGA6L22H0YM25 854 aa15.44■□□□□ 0.06
ACER3-201ENST00000278544 TRAK2O60296 914 aa15.44■□□□□ 0.06
ACER3-201ENST00000278544 USP48Q86UV5 1035 aa15.44■□□□□ 0.06
ACER3-201ENST00000278544 FAM151AQ8WW52 585 aa15.44■□□□□ 0.06
ACER3-201ENST00000278544 WDR19Q8NEZ3 1342 aa15.44■□□□□ 0.06
ACER3-201ENST00000278544 KLRF2D3W0D1 207 aa15.43■□□□□ 0.06
ACER3-201ENST00000278544 ADAMTS3O15072 1205 aa15.43■□□□□ 0.06
ACER3-201ENST00000278544 TRIM29Q14134 588 aa15.43■□□□□ 0.06
ACER3-201ENST00000278544 NOM1Q5C9Z4 860 aaKnown RBP15.43■□□□□ 0.06
ACER3-201ENST00000278544 OXER1Q8TDS5 423 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms