RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 CSB-PGBD3P0DP91 1061 aa10.36□□□□□ -0.75
HMGCLL1-201ENST00000274901 RFX5P48382 616 aaPredicted RBP10.36□□□□□ -0.75
HMGCLL1-201ENST00000274901 NEDD9Q14511 834 aa10.36□□□□□ -0.75
HMGCLL1-201ENST00000274901 KRT40Q6A162 431 aa10.36□□□□□ -0.75
HMGCLL1-201ENST00000274901 KLHL10Q6JEL2 608 aa10.36□□□□□ -0.75
HMGCLL1-201ENST00000274901 USP49Q70CQ1 688 aa10.36□□□□□ -0.75
HMGCLL1-201ENST00000274901 SMYD4Q8IYR2 804 aaPredicted RBP10.36□□□□□ -0.75
HMGCLL1-201ENST00000274901 SH2D3CQ8N5H7 860 aa10.36□□□□□ -0.75
HMGCLL1-201ENST00000274901 TSEN2Q8NCE0 465 aaKnown RBP10.36□□□□□ -0.75
HMGCLL1-201ENST00000274901 DBF4Q9UBU7 674 aaPredicted RBP10.36□□□□□ -0.75
HMGCLL1-201ENST00000274901 RGPD5Q99666 1765 aa10.36□□□□□ -0.75
HMGCLL1-201ENST00000274901 SPATA31A3Q5VYP0 1347 aa10.36□□□□□ -0.75
HMGCLL1-201ENST00000274901 POLR2DO15514 142 aaKnown RBP10.36□□□□□ -0.75
HMGCLL1-201ENST00000274901 PRC1O43663 620 aa10.36□□□□□ -0.75
HMGCLL1-201ENST00000274901 PLCD1P51178 756 aa10.36□□□□□ -0.75
HMGCLL1-201ENST00000274901 INHBEP58166 350 aa10.36□□□□□ -0.75
HMGCLL1-201ENST00000274901 C2orf54Q08AI8 447 aa10.36□□□□□ -0.75
HMGCLL1-201ENST00000274901 DPYDQ12882 1025 aa10.36□□□□□ -0.75
HMGCLL1-201ENST00000274901 TTC39AQ5SRH9 613 aa10.36□□□□□ -0.75
HMGCLL1-201ENST00000274901 MLKLQ8NB16 471 aa10.36□□□□□ -0.75
HMGCLL1-201ENST00000274901 LINS1Q8NG48 757 aa10.36□□□□□ -0.75
HMGCLL1-201ENST00000274901 ALS2Q96Q42 1657 aa10.36□□□□□ -0.75
HMGCLL1-201ENST00000274901 FRMD3A2A2Y4 597 aa10.35□□□□□ -0.75
HMGCLL1-201ENST00000274901 H0YHG0 523 aa10.35□□□□□ -0.75
HMGCLL1-201ENST00000274901 NDUFAB1O14561 156 aa10.35□□□□□ -0.75
HMGCLL1-201ENST00000274901 MEFVO15553 781 aaPredicted RBP10.35□□□□□ -0.75
HMGCLL1-201ENST00000274901 HOXB7P09629 217 aa10.35□□□□□ -0.75
HMGCLL1-201ENST00000274901 PDHBP11177 359 aa10.35□□□□□ -0.75
HMGCLL1-201ENST00000274901 CCT6AP40227 531 aaKnown RBP10.35□□□□□ -0.75
HMGCLL1-201ENST00000274901 ATP1A2P50993 1020 aa10.35□□□□□ -0.75
HMGCLL1-201ENST00000274901 PTPN12Q05209 780 aaKnown RBP10.35□□□□□ -0.75
HMGCLL1-201ENST00000274901 SPRED3Q2MJR0 410 aa10.35□□□□□ -0.75
HMGCLL1-201ENST00000274901 ZMYM1Q5SVZ6 1142 aa10.35□□□□□ -0.75
HMGCLL1-201ENST00000274901 FKBP15Q5T1M5 1219 aa10.35□□□□□ -0.75
HMGCLL1-201ENST00000274901 LRCH2Q5VUJ6 765 aa10.35□□□□□ -0.75
HMGCLL1-201ENST00000274901 NAIF1Q69YI7 327 aaPredicted RBP10.35□□□□□ -0.75
HMGCLL1-201ENST00000274901 SND1Q7KZF4 910 aaKnown RBP eCLIP10.35□□□□□ -0.75
HMGCLL1-201ENST00000274901 FAM228AQ86W67 206 aa10.35□□□□□ -0.75
HMGCLL1-201ENST00000274901 ANKRD18AQ8IVF6 992 aa10.35□□□□□ -0.75
HMGCLL1-201ENST00000274901 PHKBQ93100 1093 aa10.35□□□□□ -0.75
HMGCLL1-201ENST00000274901 ALG1Q9BT22 464 aa10.35□□□□□ -0.75
HMGCLL1-201ENST00000274901 ABHD10Q9NUJ1 306 aa10.35□□□□□ -0.75
HMGCLL1-201ENST00000274901 WWC3Q9ULE0 1092 aa10.35□□□□□ -0.75
HMGCLL1-201ENST00000274901 DDX60Q8IY21 1712 aaKnown RBP10.35□□□□□ -0.75
HMGCLL1-201ENST00000274901 KDM6AO15550 1401 aaPredicted RBP10.35□□□□□ -0.75
HMGCLL1-201ENST00000274901 TARSL2A2RTX5 802 aaKnown RBP10.35□□□□□ -0.75
HMGCLL1-201ENST00000274901 CDKAL1Q5VV42 579 aa10.35□□□□□ -0.75
HMGCLL1-201ENST00000274901 MB21D2Q8IYB1 491 aaPredicted RBP10.35□□□□□ -0.75
HMGCLL1-201ENST00000274901 OTUD6BQ8N6M0 293 aa10.35□□□□□ -0.75
HMGCLL1-201ENST00000274901 SENP2Q9HC62 589 aa10.35□□□□□ -0.75
HMGCLL1-201ENST00000274901 TNS3Q68CZ2 1445 aa10.35□□□□□ -0.75
HMGCLL1-201ENST00000274901 PXDNQ92626 1479 aa10.34□□□□□ -0.75
HMGCLL1-201ENST00000274901 PSMD14O00487 310 aa10.34□□□□□ -0.75
HMGCLL1-201ENST00000274901 CPLX1O14810 134 aa10.34□□□□□ -0.75
HMGCLL1-201ENST00000274901 PPP1R12AO14974 1030 aaPredicted RBP10.34□□□□□ -0.75
HMGCLL1-201ENST00000274901 CHUKO15111 745 aa10.34□□□□□ -0.75
HMGCLL1-201ENST00000274901 ACTN4O43707 911 aaKnown RBP10.34□□□□□ -0.75
HMGCLL1-201ENST00000274901 RASSF9O75901 435 aa10.34□□□□□ -0.75
HMGCLL1-201ENST00000274901 HERVK_113P62684 666 aa10.34□□□□□ -0.75
HMGCLL1-201ENST00000274901 APBA1Q02410 837 aa10.34□□□□□ -0.75
HMGCLL1-201ENST00000274901 TRDNQ13061 729 aa10.34□□□□□ -0.75
HMGCLL1-201ENST00000274901 CUL4BQ13620 913 aa10.34□□□□□ -0.75
HMGCLL1-201ENST00000274901 WLSQ5T9L3 541 aa10.34□□□□□ -0.75
HMGCLL1-201ENST00000274901 FBXL16Q8N461 479 aa10.34□□□□□ -0.75
HMGCLL1-201ENST00000274901 RNF217Q8TC41 542 aa10.34□□□□□ -0.75
HMGCLL1-201ENST00000274901 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.34□□□□□ -0.75
HMGCLL1-201ENST00000274901 KLC4Q9NSK0 619 aa10.34□□□□□ -0.75
HMGCLL1-201ENST00000274901 DDX20Q9UHI6 824 aaKnown RBP10.34□□□□□ -0.75
HMGCLL1-201ENST00000274901 ATXN2Q99700 1313 aaKnown RBP10.34□□□□□ -0.75
HMGCLL1-201ENST00000274901 BTBD11A6QL63 1104 aa10.34□□□□□ -0.75
HMGCLL1-201ENST00000274901 NEBLO76041 1014 aa10.34□□□□□ -0.75
HMGCLL1-201ENST00000274901 TOB1P50616 345 aaPredicted RBP10.34□□□□□ -0.75
HMGCLL1-201ENST00000274901 C1orf141Q5JVX7 400 aa10.34□□□□□ -0.75
HMGCLL1-201ENST00000274901 NBPF14Q5TI25 921 aa10.34□□□□□ -0.75
HMGCLL1-201ENST00000274901 KCTD16Q68DU8 428 aa10.34□□□□□ -0.75
HMGCLL1-201ENST00000274901 JMYQ8N9B5 988 aa10.34□□□□□ -0.75
HMGCLL1-201ENST00000274901 VEZTQ9HBM0 779 aa10.34□□□□□ -0.75
HMGCLL1-201ENST00000274901 HELLSQ9NRZ9 838 aa10.34□□□□□ -0.75
HMGCLL1-201ENST00000274901 MYO1AQ9UBC5 1043 aa10.34□□□□□ -0.75
HMGCLL1-201ENST00000274901 DMGDHQ9UI17 866 aaKnown RBP10.34□□□□□ -0.75
HMGCLL1-201ENST00000274901 ODF2LQ9ULJ1 636 aa10.34□□□□□ -0.75
HMGCLL1-201ENST00000274901 MYO5AQ9Y4I1 1855 aaKnown RBP10.34□□□□□ -0.75
HMGCLL1-201ENST00000274901 A0A087X0B3 334 aa10.33□□□□□ -0.76
HMGCLL1-201ENST00000274901 RCCD1A6NED2 376 aa10.33□□□□□ -0.76
HMGCLL1-201ENST00000274901 GCFC2P16383 781 aaKnown RBP10.33□□□□□ -0.76
HMGCLL1-201ENST00000274901 NAP1L1P55209 391 aaKnown RBP10.33□□□□□ -0.76
HMGCLL1-201ENST00000274901 SKOR1P84550 965 aa10.33□□□□□ -0.76
HMGCLL1-201ENST00000274901 SETQ01105 290 aaPredicted RBP10.33□□□□□ -0.76
HMGCLL1-201ENST00000274901 GUCY1A3Q02108 690 aa10.33□□□□□ -0.76
HMGCLL1-201ENST00000274901 PPARDQ03181 441 aa10.33□□□□□ -0.76
HMGCLL1-201ENST00000274901 PPARAQ07869 468 aa10.33□□□□□ -0.76
HMGCLL1-201ENST00000274901 HSP90AB3PQ58FF7 597 aa10.33□□□□□ -0.76
HMGCLL1-201ENST00000274901 AKAP4Q5JQC9 854 aa10.33□□□□□ -0.76
HMGCLL1-201ENST00000274901 NAA35Q5VZE5 725 aa10.33□□□□□ -0.76
HMGCLL1-201ENST00000274901 PAPD7Q5XG87 772 aaKnown RBP10.33□□□□□ -0.76
HMGCLL1-201ENST00000274901 IQCA1Q86XH1 822 aa10.33□□□□□ -0.76
HMGCLL1-201ENST00000274901 TMTC1Q8IUR5 882 aa10.33□□□□□ -0.76
HMGCLL1-201ENST00000274901 CNGA4Q8IV77 575 aa10.33□□□□□ -0.76
HMGCLL1-201ENST00000274901 CCDC13Q8IYE1 715 aa10.33□□□□□ -0.76
HMGCLL1-201ENST00000274901 KRI1Q8N9T8 703 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms