RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 KLHL40Q2TBA0 621 aa16.89■□□□□ 0.29
TRIM23-202ENST00000274327 USP48Q86UV5 1035 aa16.89■□□□□ 0.29
TRIM23-202ENST00000274327 AIFM3Q96NN9 605 aa16.89■□□□□ 0.29
TRIM23-202ENST00000274327 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.89■□□□□ 0.29
TRIM23-202ENST00000274327 IGKV6D-41A0A0C4DH26 115 aa16.89■□□□□ 0.29
TRIM23-202ENST00000274327 TCP10Q12799 353 aa16.89■□□□□ 0.29
TRIM23-202ENST00000274327 TNIP1Q15025 636 aa16.89■□□□□ 0.29
TRIM23-202ENST00000274327 DLGAP5Q15398 846 aa16.89■□□□□ 0.29
TRIM23-202ENST00000274327 OTUD7BQ6GQQ9 843 aa16.89■□□□□ 0.29
TRIM23-202ENST00000274327 FAM173BQ6P4H8 233 aa16.89■□□□□ 0.29
TRIM23-202ENST00000274327 TMTC3Q6ZXV5 915 aa16.89■□□□□ 0.29
TRIM23-202ENST00000274327 OGFOD1Q8N543 542 aa16.89■□□□□ 0.29
TRIM23-202ENST00000274327 PNMA1Q8ND90 353 aa16.89■□□□□ 0.29
TRIM23-202ENST00000274327 WASF1Q92558 559 aa16.89■□□□□ 0.29
TRIM23-202ENST00000274327 ZBED3Q96IU2 234 aaPredicted RBP16.89■□□□□ 0.29
TRIM23-202ENST00000274327 TMEM47Q9BQJ4 181 aa16.89■□□□□ 0.29
TRIM23-202ENST00000274327 RNF26Q9BY78 433 aaPredicted RBP16.89■□□□□ 0.29
TRIM23-202ENST00000274327 GDPD2Q9HCC8 539 aa16.89■□□□□ 0.29
TRIM23-202ENST00000274327 DICER1Q9UPY3 1922 aaKnown RBP16.88■□□□□ 0.29
TRIM23-202ENST00000274327 DEXIO95424 95 aa16.88■□□□□ 0.29
TRIM23-202ENST00000274327 AKR1B1P15121 316 aa16.88■□□□□ 0.29
TRIM23-202ENST00000274327 MMP14P50281 582 aa16.88■□□□□ 0.29
TRIM23-202ENST00000274327 KRT85P78386 507 aa16.88■□□□□ 0.29
TRIM23-202ENST00000274327 METTL16Q86W50 562 aaKnown RBP16.88■□□□□ 0.29
TRIM23-202ENST00000274327 TRIM22Q8IYM9 498 aa16.88■□□□□ 0.29
TRIM23-202ENST00000274327 CTCFLQ8NI51 663 aaPredicted RBP16.88■□□□□ 0.29
TRIM23-202ENST00000274327 DNAJC18Q9H819 358 aa16.88■□□□□ 0.29
TRIM23-202ENST00000274327 PI4KBQ9UBF8 816 aa16.88■□□□□ 0.29
TRIM23-202ENST00000274327 DDX49Q9Y6V7 483 aaKnown RBP16.88■□□□□ 0.29
TRIM23-202ENST00000274327 UBE2Q2LH0YL09 131 aa16.87■□□□□ 0.29
TRIM23-202ENST00000274327 FZD9O00144 591 aa16.87■□□□□ 0.29
TRIM23-202ENST00000274327 PLEKHA8P1O95397 391 aa16.87■□□□□ 0.29
TRIM23-202ENST00000274327 GUCY1A2P33402 732 aa16.87■□□□□ 0.29
TRIM23-202ENST00000274327 GRM4Q14833 912 aa16.87■□□□□ 0.29
TRIM23-202ENST00000274327 SPDYE2Q495Y8 402 aa16.87■□□□□ 0.29
TRIM23-202ENST00000274327 CMTR1Q8N1G2 835 aaKnown RBP16.87■□□□□ 0.29
TRIM23-202ENST00000274327 GJB4Q9NTQ9 266 aa16.87■□□□□ 0.29
TRIM23-202ENST00000274327 ZNF70Q9UC06 446 aaPredicted RBP16.87■□□□□ 0.29
TRIM23-202ENST00000274327 ISY1Q9ULR0 285 aaKnown RBP16.87■□□□□ 0.29
TRIM23-202ENST00000274327 CNTNAP5Q8WYK1 1306 aa16.87■□□□□ 0.29
TRIM23-202ENST00000274327 PRPF3O43395 683 aaKnown RBP16.86■□□□□ 0.29
TRIM23-202ENST00000274327 FIBPO43427 364 aa16.86■□□□□ 0.29
TRIM23-202ENST00000274327 CSPP1Q1MSJ5 1256 aa16.86■□□□□ 0.29
TRIM23-202ENST00000274327 KRT40Q6A162 431 aa16.86■□□□□ 0.29
TRIM23-202ENST00000274327 FOXP4Q8IVH2 680 aaPredicted RBP16.86■□□□□ 0.29
TRIM23-202ENST00000274327 GPT2Q8TD30 523 aa16.86■□□□□ 0.29
TRIM23-202ENST00000274327 CEP95Q96GE4 821 aa16.86■□□□□ 0.29
TRIM23-202ENST00000274327 NCLP19338 710 aaKnown RBP16.86■□□□□ 0.29
TRIM23-202ENST00000274327 RPS12P25398 132 aaKnown RBP16.86■□□□□ 0.29
TRIM23-202ENST00000274327 TMOD2Q9NZR1 351 aa16.86■□□□□ 0.29
TRIM23-202ENST00000274327 STX8Q9UNK0 236 aa16.86■□□□□ 0.29
TRIM23-202ENST00000274327 ELP1O95163 1332 aa16.85■□□□□ 0.29
TRIM23-202ENST00000274327 GADD45BO75293 160 aaPredicted RBP16.85■□□□□ 0.29
TRIM23-202ENST00000274327 MBD3O95983 291 aa16.85■□□□□ 0.29
TRIM23-202ENST00000274327 TOP1P11387 765 aaKnown RBP16.85■□□□□ 0.29
TRIM23-202ENST00000274327 KIF5BP33176 963 aa16.85■□□□□ 0.29
TRIM23-202ENST00000274327 ZNF280AP59817 542 aaPredicted RBP16.85■□□□□ 0.29
TRIM23-202ENST00000274327 KIF23Q02241 960 aaPredicted RBP16.85■□□□□ 0.29
TRIM23-202ENST00000274327 PKN1Q16512 942 aa16.85■□□□□ 0.29
TRIM23-202ENST00000274327 FKBP1CQ5VVH2 108 aa16.85■□□□□ 0.29
TRIM23-202ENST00000274327 CCDC82Q8N4S0 544 aa16.85■□□□□ 0.29
TRIM23-202ENST00000274327 SRBD1Q8N5C6 995 aaKnown RBP16.85■□□□□ 0.29
TRIM23-202ENST00000274327 CCDC17Q96LX7 622 aa16.85■□□□□ 0.29
TRIM23-202ENST00000274327 MTMR4Q9NYA4 1195 aa16.85■□□□□ 0.29
TRIM23-202ENST00000274327 GOLGB1Q14789 3259 aaKnown RBP16.85■□□□□ 0.29
TRIM23-202ENST00000274327 SLURP2P0DP57 97 aa16.84■□□□□ 0.29
TRIM23-202ENST00000274327 ATL3Q6DD88 541 aa16.84■□□□□ 0.29
TRIM23-202ENST00000274327 TATDN1Q6P1N9 297 aa16.84■□□□□ 0.29
TRIM23-202ENST00000274327 FHDC1Q9C0D6 1143 aaPredicted RBP16.84■□□□□ 0.29
TRIM23-202ENST00000274327 SCAND2PQ9GZW5 306 aaPredicted RBP16.84■□□□□ 0.29
TRIM23-202ENST00000274327 MAD2L2Q9UI95 211 aa16.84■□□□□ 0.29
TRIM23-202ENST00000274327 CNTNAP1P78357 1384 aa16.84■□□□□ 0.29
TRIM23-202ENST00000274327 SBF1O95248 1867 aa16.84■□□□□ 0.29
TRIM23-202ENST00000274327 MYH4Q9Y623 1939 aa16.84■□□□□ 0.29
TRIM23-202ENST00000274327 CLRN2A0PK11 232 aa16.84■□□□□ 0.29
TRIM23-202ENST00000274327 KIF28PB7ZC32 967 aa16.84■□□□□ 0.29
TRIM23-202ENST00000274327 EIF6P56537 245 aaKnown RBP16.84■□□□□ 0.29
TRIM23-202ENST00000274327 BRAPQ7Z569 592 aa16.84■□□□□ 0.29
TRIM23-202ENST00000274327 ZSCAN29Q8IWY8 852 aaPredicted RBP16.84■□□□□ 0.29
TRIM23-202ENST00000274327 FAM151AQ8WW52 585 aa16.84■□□□□ 0.29
TRIM23-202ENST00000274327 MYOZ2Q9NPC6 264 aa16.84■□□□□ 0.29
TRIM23-202ENST00000274327 PALM3A6NDB9 673 aaPredicted RBP16.83■□□□□ 0.28
TRIM23-202ENST00000274327 TCP10L2B9ZVM9 353 aa16.83■□□□□ 0.28
TRIM23-202ENST00000274327 GNAQP50148 359 aa16.83■□□□□ 0.28
TRIM23-202ENST00000274327 AKAP17AQ02040 695 aaKnown RBP16.83■□□□□ 0.28
TRIM23-202ENST00000274327 TRIM29Q14134 588 aa16.83■□□□□ 0.28
TRIM23-202ENST00000274327 DPF2Q92785 391 aa16.83■□□□□ 0.28
TRIM23-202ENST00000274327 TFIP11Q9UBB9 837 aaKnown RBP16.83■□□□□ 0.28
TRIM23-202ENST00000274327 SHTN1A0MZ66 631 aa16.82■□□□□ 0.28
TRIM23-202ENST00000274327 UBE2HP62256 183 aa16.82■□□□□ 0.28
TRIM23-202ENST00000274327 STAG2Q8N3U4 1231 aa16.82■□□□□ 0.28
TRIM23-202ENST00000274327 LEO1Q8WVC0 666 aaPredicted RBP16.82■□□□□ 0.28
TRIM23-202ENST00000274327 ZNF396Q96N95 335 aaPredicted RBP16.82■□□□□ 0.28
TRIM23-202ENST00000274327 CFAP45Q9UL16 551 aa16.82■□□□□ 0.28
TRIM23-202ENST00000274327 V9GY48 417 aaPredicted RBP16.82■□□□□ 0.28
TRIM23-202ENST00000274327 WNT10BO00744 389 aa16.82■□□□□ 0.28
TRIM23-202ENST00000274327 TTLL1O95922 423 aa16.82■□□□□ 0.28
TRIM23-202ENST00000274327 MMP1P03956 469 aa16.82■□□□□ 0.28
TRIM23-202ENST00000274327 U2AF2P26368 475 aaKnown RBP eCLIP16.82■□□□□ 0.28
TRIM23-202ENST00000274327 PPP4R3BQ5MIZ7 849 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms