RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 KBTBD3Q8NAB2 608 aa14.46□□□□□ -0.09
HERC6-202ENST00000273960 ZNF274Q96GC6 653 aaPredicted RBP14.46□□□□□ -0.09
HERC6-202ENST00000273960 SALL1Q9NSC2 1324 aa14.46□□□□□ -0.09
HERC6-202ENST00000273960 IGKV5-2P06315 115 aa14.46□□□□□ -0.1
HERC6-202ENST00000273960 GUCY1A3Q02108 690 aa14.46□□□□□ -0.1
HERC6-202ENST00000273960 NR1I3Q14994 352 aa14.46□□□□□ -0.1
HERC6-202ENST00000273960 PI16Q6UXB8 463 aa14.46□□□□□ -0.1
HERC6-202ENST00000273960 NKX2-3Q8TAU0 364 aa14.46□□□□□ -0.1
HERC6-202ENST00000273960 DCAF5Q96JK2 942 aa14.46□□□□□ -0.1
HERC6-202ENST00000273960 CTNND2Q9UQB3 1225 aa14.46□□□□□ -0.1
HERC6-202ENST00000273960 DUSP10Q9Y6W6 482 aa14.46□□□□□ -0.1
HERC6-202ENST00000273960 PIK3C2AO00443 1686 aa14.45□□□□□ -0.1
HERC6-202ENST00000273960 EIF4E1BA6NMX2 242 aaKnown RBP14.45□□□□□ -0.1
HERC6-202ENST00000273960 GYPCP04921 128 aa14.45□□□□□ -0.1
HERC6-202ENST00000273960 HPDP32754 393 aaPredicted RBP14.45□□□□□ -0.1
HERC6-202ENST00000273960 METAP2P50579 478 aaKnown RBP eCLIP14.45□□□□□ -0.1
HERC6-202ENST00000273960 RNASE9P60153 205 aaKnown RBP14.45□□□□□ -0.1
HERC6-202ENST00000273960 RRP12Q5JTH9 1297 aaKnown RBP14.45□□□□□ -0.1
HERC6-202ENST00000273960 CABS1Q96KC9 395 aa14.45□□□□□ -0.1
HERC6-202ENST00000273960 MAST3O60307 1309 aa14.45□□□□□ -0.1
HERC6-202ENST00000273960 MFAP3LO75121 409 aa14.45□□□□□ -0.1
HERC6-202ENST00000273960 IFIT1P09914 478 aaKnown RBP14.45□□□□□ -0.1
HERC6-202ENST00000273960 USP14P54578 494 aa14.45□□□□□ -0.1
HERC6-202ENST00000273960 WHAMMP3Q1A5X7 153 aa14.45□□□□□ -0.1
HERC6-202ENST00000273960 CTCFLQ8NI51 663 aaPredicted RBP14.45□□□□□ -0.1
HERC6-202ENST00000273960 SMCR8Q8TEV9 937 aaPredicted RBP14.45□□□□□ -0.1
HERC6-202ENST00000273960 OSBP2Q969R2 916 aa14.45□□□□□ -0.1
HERC6-202ENST00000273960 PCMTD1Q96MG8 357 aaPredicted RBP14.45□□□□□ -0.1
HERC6-202ENST00000273960 HPS5Q9UPZ3 1129 aa14.45□□□□□ -0.1
HERC6-202ENST00000273960 AKAP12Q02952 1782 aa14.45□□□□□ -0.1
HERC6-202ENST00000273960 PPP1R12BO60237 982 aaPredicted RBP14.45□□□□□ -0.1
HERC6-202ENST00000273960 CD44P16070 742 aaKnown RBP14.45□□□□□ -0.1
HERC6-202ENST00000273960 ERCC3P19447 782 aa14.45□□□□□ -0.1
HERC6-202ENST00000273960 CYP27A1Q02318 531 aa14.45□□□□□ -0.1
HERC6-202ENST00000273960 BTG4Q9NY30 223 aa14.45□□□□□ -0.1
HERC6-202ENST00000273960 AGPSO00116 658 aa14.44□□□□□ -0.1
HERC6-202ENST00000273960 KRT14P02533 472 aa14.44□□□□□ -0.1
HERC6-202ENST00000273960 NR5A1Q13285 461 aa14.44□□□□□ -0.1
HERC6-202ENST00000273960 SWT1Q5T5J6 900 aaKnown RBP14.44□□□□□ -0.1
HERC6-202ENST00000273960 KRI1Q8N9T8 703 aaKnown RBP14.44□□□□□ -0.1
HERC6-202ENST00000273960 ZKSCAN3Q9BRR0 538 aa14.44□□□□□ -0.1
HERC6-202ENST00000273960 PDHBP11177 359 aa14.44□□□□□ -0.1
HERC6-202ENST00000273960 PEX19P40855 299 aa14.44□□□□□ -0.1
HERC6-202ENST00000273960 GSCP56915 257 aaPredicted RBP14.44□□□□□ -0.1
HERC6-202ENST00000273960 NAA25Q14CX7 972 aa14.44□□□□□ -0.1
HERC6-202ENST00000273960 NAIF1Q69YI7 327 aaPredicted RBP14.44□□□□□ -0.1
HERC6-202ENST00000273960 ODF2LQ9ULJ1 636 aa14.44□□□□□ -0.1
HERC6-202ENST00000273960 SAR1BQ9Y6B6 198 aa14.44□□□□□ -0.1
HERC6-202ENST00000273960 FGAP02671 866 aa14.43□□□□□ -0.1
HERC6-202ENST00000273960 IMMTQ16891 758 aaKnown RBP14.43□□□□□ -0.1
HERC6-202ENST00000273960 LRCH2Q5VUJ6 765 aa14.43□□□□□ -0.1
HERC6-202ENST00000273960 RESP18Q5W5W9 173 aa14.43□□□□□ -0.1
HERC6-202ENST00000273960 JAKMIP2Q96AA8 810 aa14.43□□□□□ -0.1
HERC6-202ENST00000273960 BABAM1Q9NWV8 329 aa14.43□□□□□ -0.1
HERC6-202ENST00000273960 TMOD3Q9NYL9 352 aa14.43□□□□□ -0.1
HERC6-202ENST00000273960 ESYT3A0FGR9 886 aa14.43□□□□□ -0.1
HERC6-202ENST00000273960 CDC25CP30307 473 aa14.43□□□□□ -0.1
HERC6-202ENST00000273960 NOC3LQ8WTT2 800 aaKnown RBP14.43□□□□□ -0.1
HERC6-202ENST00000273960 IFT81Q8WYA0 676 aa14.43□□□□□ -0.1
HERC6-202ENST00000273960 EPSTI1Q96J88 318 aa14.43□□□□□ -0.1
HERC6-202ENST00000273960 PPANQ9NQ55 473 aaKnown RBP14.43□□□□□ -0.1
HERC6-202ENST00000273960 WWC3Q9ULE0 1092 aa14.43□□□□□ -0.1
HERC6-202ENST00000273960 SYNRGQ9UMZ2 1314 aa14.43□□□□□ -0.1
HERC6-202ENST00000273960 PDE2AO00408 941 aaPredicted RBP14.43□□□□□ -0.1
HERC6-202ENST00000273960 TBC1D31Q96DN5 1066 aa14.43□□□□□ -0.1
HERC6-202ENST00000273960 CPP00450 1065 aa14.42□□□□□ -0.1
HERC6-202ENST00000273960 ZNF18P17022 549 aa14.42□□□□□ -0.1
HERC6-202ENST00000273960 GUCY2FP51841 1108 aa14.42□□□□□ -0.1
HERC6-202ENST00000273960 PTPN12Q05209 780 aaKnown RBP14.42□□□□□ -0.1
HERC6-202ENST00000273960 GCKRQ14397 625 aa14.42□□□□□ -0.1
HERC6-202ENST00000273960 RASGRP2Q7LDG7 609 aa14.42□□□□□ -0.1
HERC6-202ENST00000273960 PANX2Q96RD6 677 aa14.42□□□□□ -0.1
HERC6-202ENST00000273960 HAUS7Q99871 368 aa14.42□□□□□ -0.1
HERC6-202ENST00000273960 TTF2Q9UNY4 1162 aaKnown RBP14.42□□□□□ -0.1
HERC6-202ENST00000273960 HPSEQ9Y251 543 aa14.42□□□□□ -0.1
HERC6-202ENST00000273960 PCDHB6Q9Y5E3 794 aa14.42□□□□□ -0.1
HERC6-202ENST00000273960 CCDC196A0A1B0GTZ2 297 aa14.42□□□□□ -0.1
HERC6-202ENST00000273960 NEURL1BA8MQ27 555 aa14.42□□□□□ -0.1
HERC6-202ENST00000273960 B4E1Z4 1266 aa14.42□□□□□ -0.1
HERC6-202ENST00000273960 IDEP14735 1019 aa14.42□□□□□ -0.1
HERC6-202ENST00000273960 IARSP41252 1262 aaKnown RBP14.42□□□□□ -0.1
HERC6-202ENST00000273960 ARHGAP25P42331 645 aa14.42□□□□□ -0.1
HERC6-202ENST00000273960 CDR1P51861 262 aa14.42□□□□□ -0.1
HERC6-202ENST00000273960 PTPAQ15257 358 aa14.42□□□□□ -0.1
HERC6-202ENST00000273960 ANKRD13CQ8N6S4 541 aa14.42□□□□□ -0.1
HERC6-202ENST00000273960 ACSBG1Q96GR2 724 aa14.42□□□□□ -0.1
HERC6-202ENST00000273960 DMGDHQ9UI17 866 aaKnown RBP14.42□□□□□ -0.1
HERC6-202ENST00000273960 EIF3HO15372 352 aaKnown RBP eCLIP14.42□□□□□ -0.1
HERC6-202ENST00000273960 HOXB7P09629 217 aa14.42□□□□□ -0.1
HERC6-202ENST00000273960 GUCY1A2P33402 732 aa14.42□□□□□ -0.1
HERC6-202ENST00000273960 CLNS1AP54105 237 aaKnown RBP14.42□□□□□ -0.1
HERC6-202ENST00000273960 UBXN1Q04323 297 aa14.42□□□□□ -0.1
HERC6-202ENST00000273960 PPFIA1Q13136 1202 aa14.42□□□□□ -0.1
HERC6-202ENST00000273960 ENOX1Q8TC92 643 aaKnown RBP14.42□□□□□ -0.1
HERC6-202ENST00000273960 ZNF622Q969S3 477 aaKnown RBP eCLIP14.42□□□□□ -0.1
HERC6-202ENST00000273960 BCCIPQ9P287 314 aaKnown RBP eCLIP14.42□□□□□ -0.1
HERC6-202ENST00000273960 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.42□□□□□ -0.1
HERC6-202ENST00000273960 CEMIPQ8WUJ3 1361 aa14.42□□□□□ -0.1
HERC6-202ENST00000273960 ZNF213O14771 459 aa14.41□□□□□ -0.1
HERC6-202ENST00000273960 IL2RBP14784 551 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms