RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 PDHXO00330 501 aa29.03■■■□□ 2.24
SSBP4-201ENST00000270061 TTC6Q86TZ1 520 aa29.03■■■□□ 2.24
SSBP4-201ENST00000270061 LCORLQ8N3X6 602 aa29.03■■■□□ 2.24
SSBP4-201ENST00000270061 ERO1AQ96HE7 468 aa29.03■■■□□ 2.24
SSBP4-201ENST00000270061 CWC22Q9HCG8 908 aaKnown RBP29.03■■■□□ 2.24
SSBP4-201ENST00000270061 PDRG1Q9NUG6 133 aa29.03■■■□□ 2.24
SSBP4-201ENST00000270061 BAZ2AQ9UIF9 1905 aaKnown RBP29.03■■■□□ 2.24
SSBP4-201ENST00000270061 TLR2O60603 784 aa29.02■■■□□ 2.24
SSBP4-201ENST00000270061 FOXP2O15409 715 aa29.01■■■□□ 2.23
SSBP4-201ENST00000270061 AK2P54819 239 aa29.01■■■□□ 2.23
SSBP4-201ENST00000270061 ARMT1Q9H993 441 aa29.01■■■□□ 2.23
SSBP4-201ENST00000270061 SERPINB13Q9UIV8 391 aa29.01■■■□□ 2.23
SSBP4-201ENST00000270061 TAF6LQ9Y6J9 622 aa29.01■■■□□ 2.23
SSBP4-201ENST00000270061 CCDC85CA6NKD9 419 aa29.01■■■□□ 2.23
SSBP4-201ENST00000270061 ASNSP08243 561 aa29.01■■■□□ 2.23
SSBP4-201ENST00000270061 BLOC1S2Q6QNY1 142 aa29.01■■■□□ 2.23
SSBP4-201ENST00000270061 SDR42E1Q8WUS8 393 aa29.01■■■□□ 2.23
SSBP4-201ENST00000270061 INTS4Q96HW7 963 aaKnown RBP29.01■■■□□ 2.23
SSBP4-201ENST00000270061 EHD4Q9H223 541 aa29.01■■■□□ 2.23
SSBP4-201ENST00000270061 CENPFP49454 3210 aa29■■■□□ 2.23
SSBP4-201ENST00000270061 HTTP42858 3142 aa29■■■□□ 2.23
SSBP4-201ENST00000270061 USP17L5A8MUK1 530 aa29■■■□□ 2.23
SSBP4-201ENST00000270061 MBD4O95243 580 aa29■■■□□ 2.23
SSBP4-201ENST00000270061 GADL1Q6ZQY3 521 aa29■■■□□ 2.23
SSBP4-201ENST00000270061 ZNF280CQ8ND82 737 aa29■■■□□ 2.23
SSBP4-201ENST00000270061 CD99L2Q8TCZ2 262 aa29■■■□□ 2.23
SSBP4-201ENST00000270061 LIMCH1Q9UPQ0 1083 aa29■■■□□ 2.23
SSBP4-201ENST00000270061 POLR3DP05423 398 aaPredicted RBP28.99■■■□□ 2.23
SSBP4-201ENST00000270061 RPS6KB1P23443 525 aa28.99■■■□□ 2.23
SSBP4-201ENST00000270061 GPAT2Q6NUI2 795 aa28.99■■■□□ 2.23
SSBP4-201ENST00000270061 MCM9Q9NXL9 1143 aa28.99■■■□□ 2.23
SSBP4-201ENST00000270061 CPA1P15085 419 aa28.98■■■□□ 2.23
SSBP4-201ENST00000270061 SPP2Q13103 211 aa28.98■■■□□ 2.23
SSBP4-201ENST00000270061 NEK1Q96PY6 1258 aa28.98■■■□□ 2.23
SSBP4-201ENST00000270061 AS3MTQ9HBK9 375 aa28.98■■■□□ 2.23
SSBP4-201ENST00000270061 DCP1AQ9NPI6 582 aaPredicted RBP28.98■■■□□ 2.23
SSBP4-201ENST00000270061 TRIM17Q9Y577 477 aa28.98■■■□□ 2.23
SSBP4-201ENST00000270061 MYH8P13535 1937 aa28.98■■■□□ 2.23
SSBP4-201ENST00000270061 GDF11O95390 407 aa28.98■■■□□ 2.23
SSBP4-201ENST00000270061 PLCD1P51178 756 aa28.98■■■□□ 2.23
SSBP4-201ENST00000270061 STRBPQ96SI9 672 aaKnown RBP28.98■■■□□ 2.23
SSBP4-201ENST00000270061 FOXD4L1Q9NU39 408 aa28.98■■■□□ 2.23
SSBP4-201ENST00000270061 GINM1Q9NU53 330 aa28.98■■■□□ 2.23
SSBP4-201ENST00000270061 FGAP02671 866 aa28.97■■■□□ 2.23
SSBP4-201ENST00000270061 HMGB1P09429 215 aaKnown RBP28.97■■■□□ 2.23
SSBP4-201ENST00000270061 PARK7Q99497 189 aaKnown RBP28.97■■■□□ 2.23
SSBP4-201ENST00000270061 LOC285556D6RIA3 1793 aa28.97■■■□□ 2.23
SSBP4-201ENST00000270061 FBXO46Q6PJ61 603 aaPredicted RBP28.96■■■□□ 2.23
SSBP4-201ENST00000270061 OTOP1Q7RTM1 612 aa28.96■■■□□ 2.23
SSBP4-201ENST00000270061 ZSCAN31Q96LW9 406 aaPredicted RBP28.96■■■□□ 2.23
SSBP4-201ENST00000270061 ANKRD1Q15327 319 aa28.96■■■□□ 2.23
SSBP4-201ENST00000270061 NFKBIBQ15653 356 aa28.96■■■□□ 2.23
SSBP4-201ENST00000270061 TATDN1Q6P1N9 297 aa28.96■■■□□ 2.23
SSBP4-201ENST00000270061 ATP8A2Q9NTI2 1148 aa28.96■■■□□ 2.23
SSBP4-201ENST00000270061 ZBTB21Q9ULJ3 1066 aa28.96■■■□□ 2.23
SSBP4-201ENST00000270061 JAG1P78504 1218 aa28.95■■■□□ 2.22
SSBP4-201ENST00000270061 ALX1Q15699 326 aa28.95■■■□□ 2.22
SSBP4-201ENST00000270061 EFCC1Q9HA90 598 aa28.95■■■□□ 2.22
SSBP4-201ENST00000270061 SLC45A1Q9Y2W3 748 aa28.95■■■□□ 2.22
SSBP4-201ENST00000270061 PRKAB2O43741 272 aa28.94■■■□□ 2.22
SSBP4-201ENST00000270061 ZMYM6O95789 1325 aa28.94■■■□□ 2.22
SSBP4-201ENST00000270061 IMMTQ16891 758 aaKnown RBP28.94■■■□□ 2.22
SSBP4-201ENST00000270061 C17orf99Q6UX52 265 aa28.94■■■□□ 2.22
SSBP4-201ENST00000270061 WDR18Q9BV38 432 aa28.94■■■□□ 2.22
SSBP4-201ENST00000270061 HPS5Q9UPZ3 1129 aa28.94■■■□□ 2.22
SSBP4-201ENST00000270061 ARHGEF6Q15052 776 aa28.93■■■□□ 2.22
SSBP4-201ENST00000270061 SHROOM1Q2M3G4 852 aaPredicted RBP28.93■■■□□ 2.22
SSBP4-201ENST00000270061 STOX1Q6ZVD7 989 aa28.93■■■□□ 2.22
SSBP4-201ENST00000270061 PROCA1Q8NCQ7 364 aaPredicted RBP28.93■■■□□ 2.22
SSBP4-201ENST00000270061 CPA4Q9UI42 421 aa28.93■■■□□ 2.22
SSBP4-201ENST00000270061 AGTPBP1Q9UPW5 1226 aa28.93■■■□□ 2.22
SSBP4-201ENST00000270061 CYP2C8P10632 490 aa28.93■■■□□ 2.22
SSBP4-201ENST00000270061 GNAT2P19087 354 aa28.93■■■□□ 2.22
SSBP4-201ENST00000270061 HMGCS2P54868 508 aa28.93■■■□□ 2.22
SSBP4-201ENST00000270061 NOL8Q76FK4 1167 aaKnown RBP28.93■■■□□ 2.22
SSBP4-201ENST00000270061 SH2B1Q9NRF2 756 aaPredicted RBP28.93■■■□□ 2.22
SSBP4-201ENST00000270061 ADGRA2Q96PE1 1338 aa28.92■■■□□ 2.22
SSBP4-201ENST00000270061 PATL2C9JE40 543 aaKnown RBP28.92■■■□□ 2.22
SSBP4-201ENST00000270061 E7EWF7 191 aa28.92■■■□□ 2.22
SSBP4-201ENST00000270061 CERKLQ49MI3 558 aaPredicted RBP28.92■■■□□ 2.22
SSBP4-201ENST00000270061 SLC4A4Q9Y6R1 1079 aa28.92■■■□□ 2.22
SSBP4-201ENST00000270061 ZSWIM8A7E2V4 1837 aa28.92■■■□□ 2.22
SSBP4-201ENST00000270061 GH2P01242 217 aa28.91■■■□□ 2.22
SSBP4-201ENST00000270061 CAP1Q01518 475 aa28.91■■■□□ 2.22
SSBP4-201ENST00000270061 GABPAQ06546 454 aa28.91■■■□□ 2.22
SSBP4-201ENST00000270061 KIF22Q14807 665 aa28.91■■■□□ 2.22
SSBP4-201ENST00000270061 RAB3GAP1Q15042 981 aa28.91■■■□□ 2.22
SSBP4-201ENST00000270061 SHMT1P34896 483 aa28.9■■■□□ 2.22
SSBP4-201ENST00000270061 BACE1P56817 501 aa28.9■■■□□ 2.22
SSBP4-201ENST00000270061 LACTBP83111 547 aaPredicted RBP28.9■■■□□ 2.22
SSBP4-201ENST00000270061 MTMR2Q13614 643 aa28.9■■■□□ 2.22
SSBP4-201ENST00000270061 COL9A3Q14050 684 aaPredicted RBP28.9■■■□□ 2.22
SSBP4-201ENST00000270061 TREML2Q5T2D2 321 aa28.9■■■□□ 2.22
SSBP4-201ENST00000270061 LAMA4Q16363 1823 aa28.9■■■□□ 2.22
SSBP4-201ENST00000270061 NUCB2P80303 420 aa28.9■■■□□ 2.22
SSBP4-201ENST00000270061 SH3D19Q5HYK7 790 aa28.9■■■□□ 2.22
SSBP4-201ENST00000270061 DHX32Q7L7V1 743 aaKnown RBP28.9■■■□□ 2.22
SSBP4-201ENST00000270061 AMOTL1Q8IY63 956 aa28.9■■■□□ 2.22
SSBP4-201ENST00000270061 EVX2Q03828 476 aa28.89■■■□□ 2.22
SSBP4-201ENST00000270061 NBR1Q14596 966 aa28.89■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms