RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 STAG1Q8WVM7 1258 aa19.23■□□□□ 0.67
RTN1-201ENST00000267484 CDC5LQ99459 802 aaKnown RBP19.23■□□□□ 0.67
RTN1-201ENST00000267484 FUT8Q9BYC5 575 aa19.23■□□□□ 0.67
RTN1-201ENST00000267484 SUGCTQ9HAC7 445 aa19.23■□□□□ 0.67
RTN1-201ENST00000267484 PLEKHA8P1O95397 391 aa19.22■□□□□ 0.67
RTN1-201ENST00000267484 TPM1P09493 284 aa19.22■□□□□ 0.67
RTN1-201ENST00000267484 FXR1P51114 621 aaKnown RBP eCLIP19.22■□□□□ 0.67
RTN1-201ENST00000267484 ABCF2Q9UG63 623 aa19.22■□□□□ 0.67
RTN1-201ENST00000267484 TNKSO95271 1327 aa19.22■□□□□ 0.67
RTN1-201ENST00000267484 TRIM75PA6NK02 468 aa19.22■□□□□ 0.67
RTN1-201ENST00000267484 V9GY48 417 aaPredicted RBP19.22■□□□□ 0.67
RTN1-201ENST00000267484 EVX2Q03828 476 aa19.22■□□□□ 0.67
RTN1-201ENST00000267484 LONRF2Q1L5Z9 754 aa19.22■□□□□ 0.67
RTN1-201ENST00000267484 WWC2Q6AWC2 1192 aa19.22■□□□□ 0.67
RTN1-201ENST00000267484 SPATA20Q8TB22 786 aa19.22■□□□□ 0.67
RTN1-201ENST00000267484 NACAP1Q9BZK3 213 aa19.22■□□□□ 0.67
RTN1-201ENST00000267484 PODXL2Q9NZ53 605 aa19.22■□□□□ 0.67
RTN1-201ENST00000267484 CTNND2Q9UQB3 1225 aa19.22■□□□□ 0.67
RTN1-201ENST00000267484 H3BQF6 201 aa19.21■□□□□ 0.67
RTN1-201ENST00000267484 RNF225M0QZC1 329 aaPredicted RBP19.21■□□□□ 0.67
RTN1-201ENST00000267484 CHMP4BP1P59074 171 aa19.21■□□□□ 0.67
RTN1-201ENST00000267484 PPARAQ07869 468 aa19.21■□□□□ 0.67
RTN1-201ENST00000267484 DZIP3Q86Y13 1208 aaKnown RBP19.21■□□□□ 0.67
RTN1-201ENST00000267484 RABGGTAQ92696 567 aa19.21■□□□□ 0.67
RTN1-201ENST00000267484 MAPK8IP1Q9UQF2 711 aa19.21■□□□□ 0.67
RTN1-201ENST00000267484 CYP19A1P11511 503 aaPredicted RBP19.21■□□□□ 0.67
RTN1-201ENST00000267484 IRX5P78411 483 aaPredicted RBP19.21■□□□□ 0.67
RTN1-201ENST00000267484 CUL4BQ13620 913 aa19.21■□□□□ 0.67
RTN1-201ENST00000267484 SPATA1Q5VX52 437 aa19.21■□□□□ 0.67
RTN1-201ENST00000267484 ZNF579Q8NAF0 562 aaKnown RBP19.21■□□□□ 0.67
RTN1-201ENST00000267484 UBXN6Q9BZV1 441 aa19.21■□□□□ 0.67
RTN1-201ENST00000267484 ADD3Q9UEY8 706 aaKnown RBP19.21■□□□□ 0.67
RTN1-201ENST00000267484 AKAP17AQ02040 695 aaKnown RBP19.21■□□□□ 0.66
RTN1-201ENST00000267484 MCM6Q14566 821 aa19.21■□□□□ 0.66
RTN1-201ENST00000267484 PKN1Q16512 942 aa19.21■□□□□ 0.66
RTN1-201ENST00000267484 ELOA2Q8IYF1 753 aaPredicted RBP19.21■□□□□ 0.66
RTN1-201ENST00000267484 TRIML1Q8N9V2 468 aa19.21■□□□□ 0.66
RTN1-201ENST00000267484 PAPPAQ13219 1627 aa19.2■□□□□ 0.66
RTN1-201ENST00000267484 ERCC5P28715 1186 aaPredicted RBP19.2■□□□□ 0.66
RTN1-201ENST00000267484 TXLNAP40222 546 aa19.2■□□□□ 0.66
RTN1-201ENST00000267484 PNKPQ96T60 521 aa19.2■□□□□ 0.66
RTN1-201ENST00000267484 LRP6O75581 1613 aa19.2■□□□□ 0.66
RTN1-201ENST00000267484 GYPCP04921 128 aa19.2■□□□□ 0.66
RTN1-201ENST00000267484 RHOXF2BP0C7M4 288 aa19.2■□□□□ 0.66
RTN1-201ENST00000267484 CYP7A1P22680 504 aa19.2■□□□□ 0.66
RTN1-201ENST00000267484 RHOXF2Q9BQY4 288 aa19.2■□□□□ 0.66
RTN1-201ENST00000267484 VPS16Q9H269 839 aa19.2■□□□□ 0.66
RTN1-201ENST00000267484 CALCOCO1Q9P1Z2 691 aa19.2■□□□□ 0.66
RTN1-201ENST00000267484 CEP131Q9UPN4 1083 aa19.2■□□□□ 0.66
RTN1-201ENST00000267484 PLEKHG2Q9H7P9 1386 aa19.2■□□□□ 0.66
RTN1-201ENST00000267484 ADAMTS3O15072 1205 aa19.19■□□□□ 0.66
RTN1-201ENST00000267484 KIF4BQ2VIQ3 1234 aa19.19■□□□□ 0.66
RTN1-201ENST00000267484 PANX2Q96RD6 677 aa19.19■□□□□ 0.66
RTN1-201ENST00000267484 PPP1R3GB7ZBB8 358 aa19.19■□□□□ 0.66
RTN1-201ENST00000267484 SUSD4Q5VX71 490 aa19.19■□□□□ 0.66
RTN1-201ENST00000267484 KANK3Q6NY19 840 aa19.19■□□□□ 0.66
RTN1-201ENST00000267484 SLC35F6Q8N357 371 aa19.19■□□□□ 0.66
RTN1-201ENST00000267484 ANKZF1Q9H8Y5 726 aa19.19■□□□□ 0.66
RTN1-201ENST00000267484 MROH5Q6ZUA9 1318 aa19.19■□□□□ 0.66
RTN1-201ENST00000267484 TOGARAM1Q9Y4F4 1720 aa19.19■□□□□ 0.66
RTN1-201ENST00000267484 CCDC196A0A1B0GTZ2 297 aa19.19■□□□□ 0.66
RTN1-201ENST00000267484 MFAP3LO75121 409 aa19.19■□□□□ 0.66
RTN1-201ENST00000267484 KIF5CO60282 957 aa19.18■□□□□ 0.66
RTN1-201ENST00000267484 MAPK8IP2Q13387 824 aaPredicted RBP19.18■□□□□ 0.66
RTN1-201ENST00000267484 AATFQ9NY61 560 aaKnown RBP eCLIP19.18■□□□□ 0.66
RTN1-201ENST00000267484 VEGFAP15692 232 aaPredicted RBP19.18■□□□□ 0.66
RTN1-201ENST00000267484 SRGAP1Q7Z6B7 1085 aa19.18■□□□□ 0.66
RTN1-201ENST00000267484 ENAHQ8N8S7 591 aaPredicted RBP19.18■□□□□ 0.66
RTN1-201ENST00000267484 ZFP91Q96JP5 570 aaPredicted RBP19.18■□□□□ 0.66
RTN1-201ENST00000267484 CHD4Q14839 1912 aa19.18■□□□□ 0.66
RTN1-201ENST00000267484 PBX1P40424 430 aa19.18■□□□□ 0.66
RTN1-201ENST00000267484 TAB2Q9NYJ8 693 aa19.18■□□□□ 0.66
RTN1-201ENST00000267484 KRT2P35908 639 aa19.17■□□□□ 0.66
RTN1-201ENST00000267484 ERVK-24P63145 666 aa19.17■□□□□ 0.66
RTN1-201ENST00000267484 DYNLL1P63167 89 aaKnown RBP19.17■□□□□ 0.66
RTN1-201ENST00000267484 SEC23AQ15436 765 aa19.17■□□□□ 0.66
RTN1-201ENST00000267484 CDKAL1Q5VV42 579 aa19.17■□□□□ 0.66
RTN1-201ENST00000267484 N4BP1O75113 896 aaKnown RBP19.17■□□□□ 0.66
RTN1-201ENST00000267484 PDE11AQ9HCR9 933 aa19.17■□□□□ 0.66
RTN1-201ENST00000267484 STRCP1A6NGW2 1772 aa19.17■□□□□ 0.66
RTN1-201ENST00000267484 SOS2Q07890 1332 aaPredicted RBP19.16■□□□□ 0.66
RTN1-201ENST00000267484 PTGDRQ13258 359 aa19.16■□□□□ 0.66
RTN1-201ENST00000267484 RNF216Q9NWF9 866 aaPredicted RBP19.16■□□□□ 0.66
RTN1-201ENST00000267484 TFR2Q9UP52 801 aa19.16■□□□□ 0.66
RTN1-201ENST00000267484 NMT2O60551 498 aa19.16■□□□□ 0.66
RTN1-201ENST00000267484 CAPN2P17655 700 aa19.16■□□□□ 0.66
RTN1-201ENST00000267484 SLC4A8Q2Y0W8 1093 aa19.16■□□□□ 0.66
RTN1-201ENST00000267484 RRAGBQ5VZM2 374 aa19.16■□□□□ 0.66
RTN1-201ENST00000267484 SH3RF1Q7Z6J0 888 aa19.16■□□□□ 0.66
RTN1-201ENST00000267484 PHF20Q9BVI0 1012 aa19.16■□□□□ 0.66
RTN1-201ENST00000267484 TMEM51Q9NW97 253 aa19.16■□□□□ 0.66
RTN1-201ENST00000267484 TRIM10Q9UDY6 481 aa19.16■□□□□ 0.66
RTN1-201ENST00000267484 CDC23Q9UJX2 597 aa19.16■□□□□ 0.66
RTN1-201ENST00000267484 XDHP47989 1333 aa19.16■□□□□ 0.66
RTN1-201ENST00000267484 N4BP3O15049 544 aa19.16■□□□□ 0.66
RTN1-201ENST00000267484 KRT31Q15323 416 aa19.16■□□□□ 0.66
RTN1-201ENST00000267484 SLF1Q9BQI6 1058 aa19.16■□□□□ 0.66
RTN1-201ENST00000267484 SHANK3Q9BYB0 1731 aa19.16■□□□□ 0.66
RTN1-201ENST00000267484 ATP8B1O43520 1251 aa19.15■□□□□ 0.66
RTN1-201ENST00000267484 LMAN1P49257 510 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms