RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 TDO2P48775 406 aa14.26□□□□□ -0.13
BEST3-201ENST00000266661 PPP2R5BQ15173 497 aa14.26□□□□□ -0.13
BEST3-201ENST00000266661 RNF26Q9BY78 433 aaPredicted RBP14.26□□□□□ -0.13
BEST3-201ENST00000266661 RNF41Q9H4P4 317 aaPredicted RBP14.26□□□□□ -0.13
BEST3-201ENST00000266661 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.26□□□□□ -0.13
BEST3-201ENST00000266661 CCP110O43303 1012 aa14.25□□□□□ -0.13
BEST3-201ENST00000266661 SART3Q15020 963 aaKnown RBP14.25□□□□□ -0.13
BEST3-201ENST00000266661 CFAP100Q494V2 611 aa14.25□□□□□ -0.13
BEST3-201ENST00000266661 CCDC152Q4G0S7 254 aa14.25□□□□□ -0.13
BEST3-201ENST00000266661 USP49Q70CQ1 688 aa14.25□□□□□ -0.13
BEST3-201ENST00000266661 SH3RF1Q7Z6J0 888 aa14.25□□□□□ -0.13
BEST3-201ENST00000266661 RIOK1Q9BRS2 568 aaKnown RBP14.25□□□□□ -0.13
BEST3-201ENST00000266661 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.25□□□□□ -0.13
BEST3-201ENST00000266661 V9GYY5 206 aaPredicted RBP14.25□□□□□ -0.13
BEST3-201ENST00000266661 COL1A1P02452 1464 aaPredicted RBP14.25□□□□□ -0.13
BEST3-201ENST00000266661 CACNA1SQ13698 1873 aa14.25□□□□□ -0.13
BEST3-201ENST00000266661 SMIM22K7EJ46 135 aa14.25□□□□□ -0.13
BEST3-201ENST00000266661 POLR2DO15514 142 aaKnown RBP14.25□□□□□ -0.13
BEST3-201ENST00000266661 NRDCO43847 1150 aa14.25□□□□□ -0.13
BEST3-201ENST00000266661 CHRNDQ07001 517 aa14.25□□□□□ -0.13
BEST3-201ENST00000266661 APTXQ7Z2E3 356 aaKnown RBP14.25□□□□□ -0.13
BEST3-201ENST00000266661 CMTR1Q8N1G2 835 aaKnown RBP14.25□□□□□ -0.13
BEST3-201ENST00000266661 MIGA1Q8NAN2 632 aa14.25□□□□□ -0.13
BEST3-201ENST00000266661 ZNF446Q9NWS9 450 aa14.25□□□□□ -0.13
BEST3-201ENST00000266661 TOP1P11387 765 aaKnown RBP14.24□□□□□ -0.13
BEST3-201ENST00000266661 GOLGA8FQ08AF8 430 aa14.24□□□□□ -0.13
BEST3-201ENST00000266661 GOLGA8DPQ0D2H9 430 aa14.24□□□□□ -0.13
BEST3-201ENST00000266661 RRP12Q5JTH9 1297 aaKnown RBP14.24□□□□□ -0.13
BEST3-201ENST00000266661 TC2NQ8N9U0 490 aa14.24□□□□□ -0.13
BEST3-201ENST00000266661 ARHGEF1Q92888 912 aaKnown RBP14.24□□□□□ -0.13
BEST3-201ENST00000266661 TNFRSF25Q93038 417 aa14.24□□□□□ -0.13
BEST3-201ENST00000266661 PHF20Q9BVI0 1012 aa14.24□□□□□ -0.13
BEST3-201ENST00000266661 AATFQ9NY61 560 aaKnown RBP eCLIP14.24□□□□□ -0.13
BEST3-201ENST00000266661 SRP68Q9UHB9 627 aaKnown RBP14.24□□□□□ -0.13
BEST3-201ENST00000266661 HOOK1Q9UJC3 728 aaKnown RBP14.24□□□□□ -0.13
BEST3-201ENST00000266661 CNTNAP4Q9C0A0 1308 aa14.24□□□□□ -0.13
BEST3-201ENST00000266661 QSER1Q2KHR3 1735 aa14.23□□□□□ -0.13
BEST3-201ENST00000266661 A0A087X0B3 334 aa14.23□□□□□ -0.13
BEST3-201ENST00000266661 VWA3AA6NCI4 1184 aa14.23□□□□□ -0.13
BEST3-201ENST00000266661 ARHGAP6O43182 974 aa14.23□□□□□ -0.13
BEST3-201ENST00000266661 RPS6KA4O75676 772 aa14.23□□□□□ -0.13
BEST3-201ENST00000266661 CYP7A1P22680 504 aa14.23□□□□□ -0.13
BEST3-201ENST00000266661 ERCC5P28715 1186 aaPredicted RBP14.23□□□□□ -0.13
BEST3-201ENST00000266661 IGHMBP2P38935 993 aaKnown RBP14.23□□□□□ -0.13
BEST3-201ENST00000266661 NPY5RQ15761 445 aa14.23□□□□□ -0.13
BEST3-201ENST00000266661 EARS2Q5JPH6 523 aaKnown RBP14.23□□□□□ -0.13
BEST3-201ENST00000266661 CT47A1Q5JQC4 288 aaPredicted RBP14.23□□□□□ -0.13
BEST3-201ENST00000266661 KANK3Q6NY19 840 aa14.23□□□□□ -0.13
BEST3-201ENST00000266661 ZNF384Q8TF68 577 aa14.23□□□□□ -0.13
BEST3-201ENST00000266661 CSRNP2Q9H175 543 aa14.23□□□□□ -0.13
BEST3-201ENST00000266661 RTCBQ9Y3I0 505 aaKnown RBP14.23□□□□□ -0.13
BEST3-201ENST00000266661 NFE2L3Q9Y4A8 694 aa14.23□□□□□ -0.13
BEST3-201ENST00000266661 TNKSO95271 1327 aa14.23□□□□□ -0.13
BEST3-201ENST00000266661 DUOX1Q9NRD9 1551 aa14.23□□□□□ -0.13
BEST3-201ENST00000266661 A0A1B0GUL6 1792 aa14.23□□□□□ -0.13
BEST3-201ENST00000266661 CASZ1Q86V15 1759 aa14.23□□□□□ -0.13
BEST3-201ENST00000266661 ERICH2A1L162 156 aa14.23□□□□□ -0.13
BEST3-201ENST00000266661 FAM205CA6NFA0 338 aa14.23□□□□□ -0.13
BEST3-201ENST00000266661 PRPF3O43395 683 aaKnown RBP14.23□□□□□ -0.13
BEST3-201ENST00000266661 ZBTB7AO95365 584 aa14.23□□□□□ -0.13
BEST3-201ENST00000266661 NR1I3Q14994 352 aa14.23□□□□□ -0.13
BEST3-201ENST00000266661 PTPN21Q16825 1174 aa14.23□□□□□ -0.13
BEST3-201ENST00000266661 ERCC6LQ2NKX8 1250 aa14.23□□□□□ -0.13
BEST3-201ENST00000266661 RC3H1Q5TC82 1133 aaKnown RBP14.23□□□□□ -0.13
BEST3-201ENST00000266661 MSL1Q68DK7 614 aa14.23□□□□□ -0.13
BEST3-201ENST00000266661 GRAMD1CQ8IYS0 662 aa14.23□□□□□ -0.13
BEST3-201ENST00000266661 ENAHQ8N8S7 591 aaPredicted RBP14.23□□□□□ -0.13
BEST3-201ENST00000266661 SMARCE1Q969G3 411 aa14.23□□□□□ -0.13
BEST3-201ENST00000266661 CABP5Q9NP86 173 aa14.23□□□□□ -0.13
BEST3-201ENST00000266661 CEP131Q9UPN4 1083 aa14.23□□□□□ -0.13
BEST3-201ENST00000266661 STX10O60499 249 aa14.22□□□□□ -0.13
BEST3-201ENST00000266661 PLCD1P51178 756 aa14.22□□□□□ -0.13
BEST3-201ENST00000266661 GABPB1Q06547 395 aaPredicted RBP14.22□□□□□ -0.13
BEST3-201ENST00000266661 CCDC82Q8N4S0 544 aa14.22□□□□□ -0.13
BEST3-201ENST00000266661 SDR42E1Q8WUS8 393 aa14.22□□□□□ -0.13
BEST3-201ENST00000266661 ESR2Q92731 530 aa14.22□□□□□ -0.13
BEST3-201ENST00000266661 LRP2BPQ9P2M1 347 aa14.22□□□□□ -0.13
BEST3-201ENST00000266661 DACH1Q9UI36 760 aa14.22□□□□□ -0.13
BEST3-201ENST00000266661 DLEC1Q9Y238 1755 aa14.22□□□□□ -0.13
BEST3-201ENST00000266661 PPP2R2CQ9Y2T4 447 aa14.22□□□□□ -0.13
BEST3-201ENST00000266661 PARP3Q9Y6F1 533 aa14.22□□□□□ -0.13
BEST3-201ENST00000266661 MAGEB6P1A0A0J9YX57 407 aa14.21□□□□□ -0.13
BEST3-201ENST00000266661 A0A1B0GTH6 734 aa14.21□□□□□ -0.13
BEST3-201ENST00000266661 WNT7AO00755 349 aa14.21□□□□□ -0.13
BEST3-201ENST00000266661 PBX1P40424 430 aa14.21□□□□□ -0.13
BEST3-201ENST00000266661 TROAPQ12815 778 aa14.21□□□□□ -0.13
BEST3-201ENST00000266661 CUL4BQ13620 913 aa14.21□□□□□ -0.13
BEST3-201ENST00000266661 TRAPPC3LQ5T215 181 aa14.21□□□□□ -0.13
BEST3-201ENST00000266661 SPECC1LQ69YQ0 1117 aa14.21□□□□□ -0.13
BEST3-201ENST00000266661 ZSCAN10Q96SZ4 725 aaPredicted RBP14.21□□□□□ -0.13
BEST3-201ENST00000266661 UBAC1Q9BSL1 405 aa14.21□□□□□ -0.13
BEST3-201ENST00000266661 BRIP1Q9BX63 1249 aa14.21□□□□□ -0.13
BEST3-201ENST00000266661 SAMSN1Q9NSI8 373 aaKnown RBP14.21□□□□□ -0.13
BEST3-201ENST00000266661 DNAI1Q9UI46 699 aa14.21□□□□□ -0.13
BEST3-201ENST00000266661 TAOK2Q9UL54 1235 aa14.21□□□□□ -0.13
BEST3-201ENST00000266661 ATF5Q9Y2D1 282 aaPredicted RBP14.21□□□□□ -0.13
BEST3-201ENST00000266661 WTIPA6NIX2 430 aaPredicted RBP14.21□□□□□ -0.14
BEST3-201ENST00000266661 TADA3O75528 432 aa14.21□□□□□ -0.14
BEST3-201ENST00000266661 NUP133Q8WUM0 1156 aa14.21□□□□□ -0.14
BEST3-201ENST00000266661 CDC5LQ99459 802 aaKnown RBP14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms