RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 NAP1L4Q99733 375 aaKnown RBP12.99□□□□□ -0.33
DNMT3A-201ENST00000264709 BZW2Q9Y6E2 419 aaKnown RBP12.99□□□□□ -0.33
DNMT3A-201ENST00000264709 PNMA8AQ86V59 439 aaPredicted RBP12.99□□□□□ -0.33
DNMT3A-201ENST00000264709 CCT5P48643 541 aa12.99□□□□□ -0.33
DNMT3A-201ENST00000264709 APPBP2Q92624 585 aa12.99□□□□□ -0.33
DNMT3A-201ENST00000264709 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.99□□□□□ -0.33
DNMT3A-201ENST00000264709 ZMYM6O95789 1325 aa12.99□□□□□ -0.33
DNMT3A-201ENST00000264709 NEO1Q92859 1461 aa12.99□□□□□ -0.33
DNMT3A-201ENST00000264709 RNASELQ05823 741 aaKnown RBP12.99□□□□□ -0.33
DNMT3A-201ENST00000264709 PHLDB3Q6NSJ2 640 aa12.99□□□□□ -0.33
DNMT3A-201ENST00000264709 TMED8Q6PL24 325 aaPredicted RBP12.99□□□□□ -0.33
DNMT3A-201ENST00000264709 ZNF652Q9Y2D9 606 aa12.99□□□□□ -0.33
DNMT3A-201ENST00000264709 MYH15Q9Y2K3 1946 aa12.99□□□□□ -0.33
DNMT3A-201ENST00000264709 CTNNA1P35221 906 aaKnown RBP12.99□□□□□ -0.33
DNMT3A-201ENST00000264709 MRFAP1Q9Y605 127 aa12.99□□□□□ -0.33
DNMT3A-201ENST00000264709 DPCR1Q3MIW9 517 aa12.98□□□□□ -0.33
DNMT3A-201ENST00000264709 LZTS2Q9BRK4 669 aa12.98□□□□□ -0.33
DNMT3A-201ENST00000264709 RANBP6O60518 1105 aaKnown RBP12.98□□□□□ -0.33
DNMT3A-201ENST00000264709 ZHX3Q9H4I2 956 aa12.98□□□□□ -0.33
DNMT3A-201ENST00000264709 BATF3Q9NR55 127 aa12.98□□□□□ -0.33
DNMT3A-201ENST00000264709 CTNND2Q9UQB3 1225 aa12.98□□□□□ -0.33
DNMT3A-201ENST00000264709 HSP90AA4PQ58FG1 418 aa12.98□□□□□ -0.33
DNMT3A-201ENST00000264709 KRT40Q6A162 431 aa12.98□□□□□ -0.33
DNMT3A-201ENST00000264709 C11orf57Q6ZUT1 292 aaPredicted RBP12.98□□□□□ -0.33
DNMT3A-201ENST00000264709 KLHL14Q9P2G3 628 aa12.98□□□□□ -0.33
DNMT3A-201ENST00000264709 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.98□□□□□ -0.33
DNMT3A-201ENST00000264709 TBCAO75347 108 aaKnown RBP12.98□□□□□ -0.33
DNMT3A-201ENST00000264709 CPA1P15085 419 aa12.98□□□□□ -0.33
DNMT3A-201ENST00000264709 CCDC152Q4G0S7 254 aa12.98□□□□□ -0.33
DNMT3A-201ENST00000264709 DLC1Q96QB1 1528 aa12.98□□□□□ -0.33
DNMT3A-201ENST00000264709 CSGALNACT2Q8N6G5 542 aa12.98□□□□□ -0.33
DNMT3A-201ENST00000264709 KCNJ18B7U540 433 aa12.98□□□□□ -0.33
DNMT3A-201ENST00000264709 KCNJ12Q14500 433 aa12.98□□□□□ -0.33
DNMT3A-201ENST00000264709 TSGA10IPQ3SY00 556 aa12.98□□□□□ -0.33
DNMT3A-201ENST00000264709 NOC4LQ9BVI4 516 aaKnown RBP12.98□□□□□ -0.33
DNMT3A-201ENST00000264709 FANCLQ9NW38 375 aa12.98□□□□□ -0.33
DNMT3A-201ENST00000264709 NDUFA8P51970 172 aa12.98□□□□□ -0.33
DNMT3A-201ENST00000264709 MTHFSDQ2M296 383 aaKnown RBP12.98□□□□□ -0.33
DNMT3A-201ENST00000264709 SIRT2Q8IXJ6 389 aa12.98□□□□□ -0.33
DNMT3A-201ENST00000264709 SLFN14P0C7P3 912 aa12.97□□□□□ -0.33
DNMT3A-201ENST00000264709 C10orf76Q5T2E6 689 aa12.97□□□□□ -0.33
DNMT3A-201ENST00000264709 IRX1P78414 480 aaPredicted RBP12.97□□□□□ -0.33
DNMT3A-201ENST00000264709 CFAP57Q96MR6 1250 aa12.97□□□□□ -0.33
DNMT3A-201ENST00000264709 DNA2P51530 1060 aa12.97□□□□□ -0.33
DNMT3A-201ENST00000264709 ZBTB16Q05516 673 aa12.97□□□□□ -0.33
DNMT3A-201ENST00000264709 MAP3K21Q5TCX8 1036 aa12.97□□□□□ -0.33
DNMT3A-201ENST00000264709 C3orf20Q8ND61 904 aa12.97□□□□□ -0.33
DNMT3A-201ENST00000264709 PCP11498 1178 aaKnown RBP12.97□□□□□ -0.33
DNMT3A-201ENST00000264709 CCDC62Q6P9F0 684 aa12.97□□□□□ -0.33
DNMT3A-201ENST00000264709 CIB2O75838 187 aa12.97□□□□□ -0.33
DNMT3A-201ENST00000264709 CCDC197Q8NCU1 140 aa12.97□□□□□ -0.33
DNMT3A-201ENST00000264709 SIRT1Q96EB6 747 aa12.97□□□□□ -0.33
DNMT3A-201ENST00000264709 BICC1Q9H694 974 aaKnown RBP12.97□□□□□ -0.33
DNMT3A-201ENST00000264709 GUCY2CP25092 1073 aa12.97□□□□□ -0.33
DNMT3A-201ENST00000264709 RASEFQ8IZ41 740 aa12.97□□□□□ -0.33
DNMT3A-201ENST00000264709 KAT14Q9H8E8 782 aa12.97□□□□□ -0.33
DNMT3A-201ENST00000264709 SEL1L2Q5TEA6 688 aa12.97□□□□□ -0.33
DNMT3A-201ENST00000264709 ESCO1Q5FWF5 840 aa12.97□□□□□ -0.33
DNMT3A-201ENST00000264709 WDR78Q5VTH9 848 aa12.97□□□□□ -0.33
DNMT3A-201ENST00000264709 LRRD1A4D1F6 860 aa12.96□□□□□ -0.33
DNMT3A-201ENST00000264709 GAS8O95995 478 aa12.96□□□□□ -0.33
DNMT3A-201ENST00000264709 ADKP55263 362 aaKnown RBP12.96□□□□□ -0.33
DNMT3A-201ENST00000264709 RPS6KA1Q15418 735 aa12.96□□□□□ -0.33
DNMT3A-201ENST00000264709 FAM227BQ96M60 508 aa12.96□□□□□ -0.33
DNMT3A-201ENST00000264709 LINC00301Q8NCQ3 95 aa12.96□□□□□ -0.33
DNMT3A-201ENST00000264709 DESI2Q9BSY9 194 aa12.96□□□□□ -0.33
DNMT3A-201ENST00000264709 CRNKL1Q9BZJ0 848 aaKnown RBP12.96□□□□□ -0.33
DNMT3A-201ENST00000264709 FOXP1Q9H334 677 aaPredicted RBP12.96□□□□□ -0.33
DNMT3A-201ENST00000264709 SUN1O94901 812 aa12.96□□□□□ -0.33
DNMT3A-201ENST00000264709 DAAM2Q86T65 1068 aa12.96□□□□□ -0.33
DNMT3A-201ENST00000264709 JPH2Q9BR39 696 aaPredicted RBP12.96□□□□□ -0.33
DNMT3A-201ENST00000264709 VCX3AQ9NNX9 186 aa12.96□□□□□ -0.33
DNMT3A-201ENST00000264709 MINDY4BA8MYZ0 360 aa12.96□□□□□ -0.33
DNMT3A-201ENST00000264709 JAK2O60674 1132 aa12.96□□□□□ -0.33
DNMT3A-201ENST00000264709 UBE4AQ14139 1066 aa12.96□□□□□ -0.33
DNMT3A-201ENST00000264709 SLC9C2Q5TAH2 1124 aa12.96□□□□□ -0.33
DNMT3A-201ENST00000264709 SELENOSQ9BQE4 189 aa12.96□□□□□ -0.33
DNMT3A-201ENST00000264709 SLF1Q9BQI6 1058 aa12.96□□□□□ -0.33
DNMT3A-201ENST00000264709 EHMT1Q9H9B1 1298 aa12.96□□□□□ -0.33
DNMT3A-201ENST00000264709 KCND1Q9NSA2 647 aa12.96□□□□□ -0.33
DNMT3A-201ENST00000264709 TXLNGQ9NUQ3 528 aa12.96□□□□□ -0.33
DNMT3A-201ENST00000264709 H2AFXP16104 143 aaPredicted RBP12.96□□□□□ -0.34
DNMT3A-201ENST00000264709 ITIH3Q06033 890 aa12.96□□□□□ -0.34
DNMT3A-201ENST00000264709 PPP4R3AQ6IN85 833 aa12.96□□□□□ -0.34
DNMT3A-201ENST00000264709 MYH11P35749 1972 aa12.96□□□□□ -0.34
DNMT3A-201ENST00000264709 RCAN1P53805 252 aa12.96□□□□□ -0.34
DNMT3A-201ENST00000264709 FAM173BQ6P4H8 233 aa12.96□□□□□ -0.34
DNMT3A-201ENST00000264709 PAXIP1Q6ZW49 1069 aaPredicted RBP12.96□□□□□ -0.34
DNMT3A-201ENST00000264709 NCAPD2Q15021 1401 aa12.96□□□□□ -0.34
DNMT3A-201ENST00000264709 LAD1O00515 517 aa12.95□□□□□ -0.34
DNMT3A-201ENST00000264709 RGS16O15492 202 aaPredicted RBP12.95□□□□□ -0.34
DNMT3A-201ENST00000264709 IFNL2Q8IZJ0 200 aa12.95□□□□□ -0.34
DNMT3A-201ENST00000264709 HAUS7Q99871 368 aa12.95□□□□□ -0.34
DNMT3A-201ENST00000264709 DLG5Q8TDM6 1919 aa12.95□□□□□ -0.34
DNMT3A-201ENST00000264709 E7EWF7 191 aa12.95□□□□□ -0.34
DNMT3A-201ENST00000264709 BAG3O95817 575 aa12.95□□□□□ -0.34
DNMT3A-201ENST00000264709 MPRIPQ6WCQ1 1025 aa12.95□□□□□ -0.34
DNMT3A-201ENST00000264709 MCUR1Q96AQ8 359 aa12.95□□□□□ -0.34
DNMT3A-201ENST00000264709 MMRN2Q9H8L6 949 aa12.95□□□□□ -0.34
DNMT3A-201ENST00000264709 KRT13P13646 458 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms