RNA–Protein interactions for RNA: ENST00000263598.6

LCN1-201, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-201ENST00000263598 MSCO60682 206 aa10.93□□□□□ -0.66
LCN1-201ENST00000263598 SURF6O75683 361 aaKnown RBP10.93□□□□□ -0.66
LCN1-201ENST00000263598 DYNLL1P63167 89 aaKnown RBP10.93□□□□□ -0.66
LCN1-201ENST00000263598 MDM2Q00987 491 aaPredicted RBP10.93□□□□□ -0.66
LCN1-201ENST00000263598 ATP2B2Q01814 1243 aa10.93□□□□□ -0.66
LCN1-201ENST00000263598 POLA2Q14181 598 aa10.93□□□□□ -0.66
LCN1-201ENST00000263598 RAB3GAP1Q15042 981 aa10.93□□□□□ -0.66
LCN1-201ENST00000263598 TATDN1Q6P1N9 297 aa10.93□□□□□ -0.66
LCN1-201ENST00000263598 CLUAP1Q96AJ1 413 aa10.93□□□□□ -0.66
LCN1-201ENST00000263598 PIH1D3Q9NQM4 214 aaKnown RBP10.93□□□□□ -0.66
LCN1-201ENST00000263598 SERPINB13Q9UIV8 391 aa10.93□□□□□ -0.66
LCN1-201ENST00000263598 IVNS1ABPQ9Y6Y0 642 aa10.93□□□□□ -0.66
LCN1-201ENST00000263598 SIPA1L1O43166 1804 aa10.93□□□□□ -0.66
LCN1-201ENST00000263598 IDH1O75874 414 aaKnown RBP10.92□□□□□ -0.66
LCN1-201ENST00000263598 PTPREP23469 700 aa10.92□□□□□ -0.66
LCN1-201ENST00000263598 CNGA1P29973 690 aa10.92□□□□□ -0.66
LCN1-201ENST00000263598 ATP8B2P98198 1209 aa10.92□□□□□ -0.66
LCN1-201ENST00000263598 ABCB5Q2M3G0 1257 aa10.92□□□□□ -0.66
LCN1-201ENST00000263598 CERKLQ49MI3 558 aaPredicted RBP10.92□□□□□ -0.66
LCN1-201ENST00000263598 TMED8Q6PL24 325 aaPredicted RBP10.92□□□□□ -0.66
LCN1-201ENST00000263598 POTEEQ6S8J3 1075 aa10.92□□□□□ -0.66
LCN1-201ENST00000263598 CATSPERGQ6ZRH7 1159 aa10.92□□□□□ -0.66
LCN1-201ENST00000263598 TTC6Q86TZ1 520 aa10.92□□□□□ -0.66
LCN1-201ENST00000263598 MIGA1Q8NAN2 632 aa10.92□□□□□ -0.66
LCN1-201ENST00000263598 SSH3Q8TE77 659 aa10.92□□□□□ -0.66
LCN1-201ENST00000263598 SENP6Q9GZR1 1112 aaPredicted RBP10.92□□□□□ -0.66
LCN1-201ENST00000263598 KIAA1683Q9H0B3 1180 aa10.92□□□□□ -0.66
LCN1-201ENST00000263598 EHD4Q9H223 541 aa10.92□□□□□ -0.66
LCN1-201ENST00000263598 CABP5Q9NP86 173 aa10.92□□□□□ -0.66
LCN1-201ENST00000263598 PRKAG2Q9UGJ0 569 aa10.92□□□□□ -0.66
LCN1-201ENST00000263598 DDX20Q9UHI6 824 aaKnown RBP10.92□□□□□ -0.66
LCN1-201ENST00000263598 NDUFB9Q9Y6M9 179 aa10.92□□□□□ -0.66
LCN1-201ENST00000263598 DNM1LO00429 736 aa10.91□□□□□ -0.66
LCN1-201ENST00000263598 BCAR3O75815 825 aa10.91□□□□□ -0.66
LCN1-201ENST00000263598 CNMDO75829 334 aa10.91□□□□□ -0.66
LCN1-201ENST00000263598 VCAM1P19320 739 aa10.91□□□□□ -0.66
LCN1-201ENST00000263598 MAP3K12Q12852 859 aa10.91□□□□□ -0.66
LCN1-201ENST00000263598 LBX2Q6XYB7 198 aa10.91□□□□□ -0.66
LCN1-201ENST00000263598 TMEM57Q8N5G2 664 aa10.91□□□□□ -0.66
LCN1-201ENST00000263598 MAGEB6Q8N7X4 407 aa10.91□□□□□ -0.66
LCN1-201ENST00000263598 LPAR1Q92633 364 aa10.91□□□□□ -0.66
LCN1-201ENST00000263598 FLRT1Q9NZU1 646 aa10.91□□□□□ -0.66
LCN1-201ENST00000263598 DBNLQ9UJU6 430 aaKnown RBP10.91□□□□□ -0.66
LCN1-201ENST00000263598 TNNQ9UQP3 1299 aa10.91□□□□□ -0.66
LCN1-201ENST00000263598 HOXC6P09630 235 aa10.9□□□□□ -0.66
LCN1-201ENST00000263598 GRB14Q14449 540 aa10.9□□□□□ -0.66
LCN1-201ENST00000263598 ZKSCAN2Q63HK3 967 aa10.9□□□□□ -0.66
LCN1-201ENST00000263598 FAM109BQ6ICB4 259 aaPredicted RBP10.9□□□□□ -0.66
LCN1-201ENST00000263598 CCDC8Q9H0W5 538 aaPredicted RBP10.9□□□□□ -0.66
LCN1-201ENST00000263598 RPAP3Q9H6T3 665 aaPredicted RBP10.9□□□□□ -0.66
LCN1-201ENST00000263598 BTBD7Q9P203 1132 aa10.9□□□□□ -0.66
LCN1-201ENST00000263598 NOP58Q9Y2X3 529 aaKnown RBP10.9□□□□□ -0.66
LCN1-201ENST00000263598 FOCADQ5VW36 1801 aa10.9□□□□□ -0.66
LCN1-201ENST00000263598 STRNO43815 780 aa10.89□□□□□ -0.67
LCN1-201ENST00000263598 POLR3DP05423 398 aaPredicted RBP10.89□□□□□ -0.67
LCN1-201ENST00000263598 CYP2C19P33261 490 aa10.89□□□□□ -0.67
LCN1-201ENST00000263598 ATN1P54259 1190 aaPredicted RBP10.89□□□□□ -0.67
LCN1-201ENST00000263598 DPP9Q86TI2 863 aa10.89□□□□□ -0.67
LCN1-201ENST00000263598 ARRDC4Q8NCT1 418 aa10.89□□□□□ -0.67
LCN1-201ENST00000263598 ACER1Q8TDN7 264 aa10.89□□□□□ -0.67
LCN1-201ENST00000263598 HOXC10Q9NYD6 342 aa10.89□□□□□ -0.67
LCN1-201ENST00000263598 TLR7Q9NYK1 1049 aaKnown RBP10.89□□□□□ -0.67
LCN1-201ENST00000263598 A0A0C4DFX4 3053 aa10.89□□□□□ -0.67
LCN1-201ENST00000263598 SPDYE16A6NNV3 312 aaPredicted RBP10.88□□□□□ -0.67
LCN1-201ENST00000263598 KBTBD13C9JR72 458 aa10.88□□□□□ -0.67
LCN1-201ENST00000263598 POTEB2H3BUK9 544 aa10.88□□□□□ -0.67
LCN1-201ENST00000263598 COG2Q14746 738 aa10.88□□□□□ -0.67
LCN1-201ENST00000263598 ZNF697Q5TEC3 545 aa10.88□□□□□ -0.67
LCN1-201ENST00000263598 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.88□□□□□ -0.67
LCN1-201ENST00000263598 FTSJ3Q8IY81 847 aaKnown RBP10.88□□□□□ -0.67
LCN1-201ENST00000263598 NPLOC4Q8TAT6 608 aa10.88□□□□□ -0.67
LCN1-201ENST00000263598 EAF2Q96CJ1 260 aaPredicted RBP10.88□□□□□ -0.67
LCN1-201ENST00000263598 C1orf115Q9H7X2 142 aa10.88□□□□□ -0.67
LCN1-201ENST00000263598 SLC5A4Q9NY91 659 aa10.88□□□□□ -0.67
LCN1-201ENST00000263598 CDK5RAP2Q96SN8 1893 aa10.87□□□□□ -0.67
LCN1-201ENST00000263598 MAGEB6P1A0A0J9YX57 407 aa10.87□□□□□ -0.67
LCN1-201ENST00000263598 CCER2I3L3R5 266 aa10.87□□□□□ -0.67
LCN1-201ENST00000263598 MPHOSPH10O00566 681 aaKnown RBP10.87□□□□□ -0.67
LCN1-201ENST00000263598 CYBAP13498 195 aa10.87□□□□□ -0.67
LCN1-201ENST00000263598 ADORA2AP29274 412 aa10.87□□□□□ -0.67
LCN1-201ENST00000263598 SHMT1P34896 483 aa10.87□□□□□ -0.67
LCN1-201ENST00000263598 PLCD1P51178 756 aa10.87□□□□□ -0.67
LCN1-201ENST00000263598 RTP1P59025 263 aa10.87□□□□□ -0.67
LCN1-201ENST00000263598 TTF1Q15361 905 aaPredicted RBP10.87□□□□□ -0.67
LCN1-201ENST00000263598 GJC2Q5T442 439 aaPredicted RBP10.87□□□□□ -0.67
LCN1-201ENST00000263598 OLFML2BQ68BL8 750 aa10.87□□□□□ -0.67
LCN1-201ENST00000263598 ERC1Q8IUD2 1116 aa10.87□□□□□ -0.67
LCN1-201ENST00000263598 ITPRIPQ8IWB1 547 aa10.87□□□□□ -0.67
LCN1-201ENST00000263598 FAM161BQ96MY7 647 aa10.87□□□□□ -0.67
LCN1-201ENST00000263598 CRNKL1Q9BZJ0 848 aaKnown RBP10.87□□□□□ -0.67
LCN1-201ENST00000263598 TANGO6Q9C0B7 1094 aa10.87□□□□□ -0.67
LCN1-201ENST00000263598 ANTXR1Q9H6X2 564 aa10.87□□□□□ -0.67
LCN1-201ENST00000263598 ATP11BQ9Y2G3 1177 aa10.87□□□□□ -0.67
LCN1-201ENST00000263598 SEPT4O43236 478 aa10.86□□□□□ -0.67
LCN1-201ENST00000263598 IGHA2P01877 340 aa10.86□□□□□ -0.67
LCN1-201ENST00000263598 MYCNP04198 464 aaPredicted RBP10.86□□□□□ -0.67
LCN1-201ENST00000263598 GUCY1A2P33402 732 aa10.86□□□□□ -0.67
LCN1-201ENST00000263598 SEPT2Q15019 361 aa10.86□□□□□ -0.67
LCN1-201ENST00000263598 SLC39A5Q6ZMH5 540 aa10.86□□□□□ -0.67
LCN1-201ENST00000263598 AACSQ86V21 672 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms