RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 USTQ9Y2C2 406 aa14.27□□□□□ -0.12
TTC39A-202ENST00000262676 RIPOR2Q9Y4F9 1068 aa14.27□□□□□ -0.12
TTC39A-202ENST00000262676 ASIC2Q16515 512 aa14.27□□□□□ -0.12
TTC39A-202ENST00000262676 NLGN1Q8N2Q7 840 aa14.27□□□□□ -0.12
TTC39A-202ENST00000262676 FAF1Q9UNN5 650 aaPredicted RBP14.27□□□□□ -0.12
TTC39A-202ENST00000262676 WDR44Q5JSH3 913 aa14.27□□□□□ -0.13
TTC39A-202ENST00000262676 SEPT8Q92599 483 aa14.27□□□□□ -0.13
TTC39A-202ENST00000262676 RRP36Q96EU6 259 aaKnown RBP14.27□□□□□ -0.13
TTC39A-202ENST00000262676 CNNM2Q9H8M5 875 aa14.27□□□□□ -0.13
TTC39A-202ENST00000262676 ARHGEF10LQ9HCE6 1279 aa14.27□□□□□ -0.13
TTC39A-202ENST00000262676 ASAP1Q9ULH1 1129 aa14.27□□□□□ -0.13
TTC39A-202ENST00000262676 CLRN2A0PK11 232 aa14.27□□□□□ -0.13
TTC39A-202ENST00000262676 STX10O60499 249 aa14.27□□□□□ -0.13
TTC39A-202ENST00000262676 MBD4O95243 580 aa14.27□□□□□ -0.13
TTC39A-202ENST00000262676 EPB41P11171 864 aaKnown RBP14.27□□□□□ -0.13
TTC39A-202ENST00000262676 MAPKAPK5Q8IW41 473 aa14.27□□□□□ -0.13
TTC39A-202ENST00000262676 VCX3AQ9NNX9 186 aa14.27□□□□□ -0.13
TTC39A-202ENST00000262676 ALDH1L1O75891 902 aa14.27□□□□□ -0.13
TTC39A-202ENST00000262676 KRT15P19012 456 aa14.27□□□□□ -0.13
TTC39A-202ENST00000262676 APOBRQ0VD83 1088 aa14.27□□□□□ -0.13
TTC39A-202ENST00000262676 NSMFQ6X4W1 530 aa14.27□□□□□ -0.13
TTC39A-202ENST00000262676 KSR1Q8IVT5 923 aa14.27□□□□□ -0.13
TTC39A-202ENST00000262676 TMTC2Q8N394 836 aa14.27□□□□□ -0.13
TTC39A-202ENST00000262676 PLBD2Q8NHP8 589 aa14.27□□□□□ -0.13
TTC39A-202ENST00000262676 NOP56O00567 594 aaKnown RBP14.26□□□□□ -0.13
TTC39A-202ENST00000262676 IGSF22Q8N9C0 903 aa14.26□□□□□ -0.13
TTC39A-202ENST00000262676 CHMP2AO43633 222 aa14.26□□□□□ -0.13
TTC39A-202ENST00000262676 CAPN7Q9Y6W3 813 aa14.26□□□□□ -0.13
TTC39A-202ENST00000262676 TRAF5O00463 557 aa14.26□□□□□ -0.13
TTC39A-202ENST00000262676 R3HDM1Q15032 1099 aaKnown RBP14.26□□□□□ -0.13
TTC39A-202ENST00000262676 USH1GQ495M9 461 aa14.26□□□□□ -0.13
TTC39A-202ENST00000262676 DTHD1Q6ZMT9 781 aa14.26□□□□□ -0.13
TTC39A-202ENST00000262676 UBL4BQ8N7F7 174 aa14.26□□□□□ -0.13
TTC39A-202ENST00000262676 DDX39AO00148 427 aaKnown RBP14.26□□□□□ -0.13
TTC39A-202ENST00000262676 STK10O94804 968 aaKnown RBP14.26□□□□□ -0.13
TTC39A-202ENST00000262676 NXNQ6DKJ4 435 aa14.26□□□□□ -0.13
TTC39A-202ENST00000262676 CCDC89Q8N998 374 aa14.26□□□□□ -0.13
TTC39A-202ENST00000262676 ZMAT2Q96NC0 199 aaKnown RBP14.26□□□□□ -0.13
TTC39A-202ENST00000262676 SH2D4AQ9H788 454 aa14.26□□□□□ -0.13
TTC39A-202ENST00000262676 RBM28Q9NW13 759 aaKnown RBP14.26□□□□□ -0.13
TTC39A-202ENST00000262676 TBC1D8O95759 1140 aa14.25□□□□□ -0.13
TTC39A-202ENST00000262676 CYP26C1Q6V0L0 522 aa14.25□□□□□ -0.13
TTC39A-202ENST00000262676 ARMT1Q9H993 441 aa14.25□□□□□ -0.13
TTC39A-202ENST00000262676 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.25□□□□□ -0.13
TTC39A-202ENST00000262676 RAD17O75943 681 aa14.25□□□□□ -0.13
TTC39A-202ENST00000262676 MCMDC2Q4G0Z9 681 aa14.25□□□□□ -0.13
TTC39A-202ENST00000262676 RILPL1Q5EBL4 403 aa14.25□□□□□ -0.13
TTC39A-202ENST00000262676 LRCH2Q5VUJ6 765 aa14.25□□□□□ -0.13
TTC39A-202ENST00000262676 FNBP1Q96RU3 617 aa14.25□□□□□ -0.13
TTC39A-202ENST00000262676 PRDM1O75626 825 aa14.25□□□□□ -0.13
TTC39A-202ENST00000262676 BEND3Q5T5X7 828 aa14.25□□□□□ -0.13
TTC39A-202ENST00000262676 C17orf53Q8N3J3 647 aaPredicted RBP14.25□□□□□ -0.13
TTC39A-202ENST00000262676 CTTNBP2Q8WZ74 1663 aa14.25□□□□□ -0.13
TTC39A-202ENST00000262676 ANKRD20A3Q5VUR7 823 aa14.25□□□□□ -0.13
TTC39A-202ENST00000262676 ESYT1Q9BSJ8 1104 aa14.25□□□□□ -0.13
TTC39A-202ENST00000262676 PBRM1Q86U86 1689 aa14.25□□□□□ -0.13
TTC39A-202ENST00000262676 A0A1B0GVL5 298 aa14.25□□□□□ -0.13
TTC39A-202ENST00000262676 CRKLP46109 303 aaKnown RBP14.25□□□□□ -0.13
TTC39A-202ENST00000262676 DALRD3Q5D0E6 543 aaKnown RBP14.25□□□□□ -0.13
TTC39A-202ENST00000262676 PDZD8Q8NEN9 1154 aa14.25□□□□□ -0.13
TTC39A-202ENST00000262676 TGFBRAP1Q8WUH2 860 aa14.25□□□□□ -0.13
TTC39A-202ENST00000262676 CNKSR1Q969H4 720 aa14.25□□□□□ -0.13
TTC39A-202ENST00000262676 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.25□□□□□ -0.13
TTC39A-202ENST00000262676 USP40Q9NVE5 1235 aa14.25□□□□□ -0.13
TTC39A-202ENST00000262676 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.25□□□□□ -0.13
TTC39A-202ENST00000262676 PFDN1O60925 122 aa14.24□□□□□ -0.13
TTC39A-202ENST00000262676 TTLL3Q9Y4R7 772 aa14.24□□□□□ -0.13
TTC39A-202ENST00000262676 VWA3AA6NCI4 1184 aa14.24□□□□□ -0.13
TTC39A-202ENST00000262676 CEP104O60308 925 aa14.24□□□□□ -0.13
TTC39A-202ENST00000262676 RUFY4Q6ZNE9 571 aa14.24□□□□□ -0.13
TTC39A-202ENST00000262676 TRIM4Q9C037 500 aa14.24□□□□□ -0.13
TTC39A-202ENST00000262676 PEG3Q9GZU2 1588 aa14.24□□□□□ -0.13
TTC39A-202ENST00000262676 GNAQP50148 359 aa14.24□□□□□ -0.13
TTC39A-202ENST00000262676 ZNF174Q15697 407 aa14.24□□□□□ -0.13
TTC39A-202ENST00000262676 RBSNQ9H1K0 784 aa14.24□□□□□ -0.13
TTC39A-202ENST00000262676 DBNDD1Q9H9R9 158 aa14.24□□□□□ -0.13
TTC39A-202ENST00000262676 MAPK8IP1Q9UQF2 711 aa14.24□□□□□ -0.13
TTC39A-202ENST00000262676 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.24□□□□□ -0.13
TTC39A-202ENST00000262676 MFSD14BQ5SR56 506 aa14.24□□□□□ -0.13
TTC39A-202ENST00000262676 GDAP1L1Q96MZ0 367 aa14.24□□□□□ -0.13
TTC39A-202ENST00000262676 VPS37BQ9H9H4 285 aa14.24□□□□□ -0.13
TTC39A-202ENST00000262676 VPS41P49754 854 aa14.24□□□□□ -0.13
TTC39A-202ENST00000262676 IL1RL1Q01638 556 aa14.24□□□□□ -0.13
TTC39A-202ENST00000262676 NUCB1Q02818 461 aa14.24□□□□□ -0.13
TTC39A-202ENST00000262676 LIN9Q5TKA1 542 aa14.24□□□□□ -0.13
TTC39A-202ENST00000262676 G2E3Q7L622 706 aa14.24□□□□□ -0.13
TTC39A-202ENST00000262676 NUP160Q12769 1436 aa14.23□□□□□ -0.13
TTC39A-202ENST00000262676 TBC1D8BQ0IIM8 1120 aa14.23□□□□□ -0.13
TTC39A-202ENST00000262676 NMIQ13287 307 aaPredicted RBP14.23□□□□□ -0.13
TTC39A-202ENST00000262676 RBBP5Q15291 538 aaKnown RBP14.23□□□□□ -0.13
TTC39A-202ENST00000262676 SECISBP2LQ93073 1101 aaKnown RBP14.23□□□□□ -0.13
TTC39A-202ENST00000262676 PLCB1Q9NQ66 1216 aa14.23□□□□□ -0.13
TTC39A-202ENST00000262676 PUM3Q15397 648 aaKnown RBP14.23□□□□□ -0.13
TTC39A-202ENST00000262676 AP1ARQ63HQ0 302 aa14.23□□□□□ -0.13
TTC39A-202ENST00000262676 CARD14Q9BXL6 1004 aa14.23□□□□□ -0.13
TTC39A-202ENST00000262676 MYL5Q02045 173 aa14.23□□□□□ -0.13
TTC39A-202ENST00000262676 ERFEQ4G0M1 354 aa14.23□□□□□ -0.13
TTC39A-202ENST00000262676 SV2BQ7L1I2 683 aa14.23□□□□□ -0.13
TTC39A-202ENST00000262676 SRGAP1Q7Z6B7 1085 aa14.23□□□□□ -0.13
TTC39A-202ENST00000262676 SPDL1Q96EA4 605 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms