RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 ZHX1Q9UKY1 873 aaPredicted RBP15.15■□□□□ 0.02
PDGFRB-201ENST00000261799 ABL1P00519 1130 aa15.15■□□□□ 0.02
PDGFRB-201ENST00000261799 ZSCAN10Q96SZ4 725 aaPredicted RBP15.15■□□□□ 0.02
PDGFRB-201ENST00000261799 MRPL44Q9H9J2 332 aaKnown RBP15.15■□□□□ 0.02
PDGFRB-201ENST00000261799 XPOTO43592 962 aaKnown RBP15.15■□□□□ 0.02
PDGFRB-201ENST00000261799 GRAPQ13588 217 aa15.15■□□□□ 0.02
PDGFRB-201ENST00000261799 LRRC47Q8N1G4 583 aaKnown RBP15.15■□□□□ 0.02
PDGFRB-201ENST00000261799 GRAPLQ8TC17 118 aaPredicted RBP15.15■□□□□ 0.02
PDGFRB-201ENST00000261799 JPH2Q9BR39 696 aaPredicted RBP15.15■□□□□ 0.02
PDGFRB-201ENST00000261799 NT5C3AQ9H0P0 336 aa15.15■□□□□ 0.02
PDGFRB-201ENST00000261799 ZNF215Q9UL58 517 aaPredicted RBP15.15■□□□□ 0.02
PDGFRB-201ENST00000261799 SMCO2A6NFE2 343 aa15.15■□□□□ 0.02
PDGFRB-201ENST00000261799 SLC27A2O14975 620 aa15.15■□□□□ 0.02
PDGFRB-201ENST00000261799 GCNT3O95395 438 aa15.15■□□□□ 0.02
PDGFRB-201ENST00000261799 SND1Q7KZF4 910 aaKnown RBP eCLIP15.15■□□□□ 0.02
PDGFRB-201ENST00000261799 CSRNP2Q9H175 543 aa15.15■□□□□ 0.02
PDGFRB-201ENST00000261799 RNF216Q9NWF9 866 aaPredicted RBP15.15■□□□□ 0.02
PDGFRB-201ENST00000261799 STIM2Q9P246 746 aa15.15■□□□□ 0.02
PDGFRB-201ENST00000261799 EN1Q05925 392 aaPredicted RBP15.14■□□□□ 0.01
PDGFRB-201ENST00000261799 CCT6BQ92526 530 aa15.14■□□□□ 0.01
PDGFRB-201ENST00000261799 ZBTB1Q9Y2K1 713 aa15.14■□□□□ 0.01
PDGFRB-201ENST00000261799 ELP1O95163 1332 aa15.14■□□□□ 0.01
PDGFRB-201ENST00000261799 ERVV-1B6SEH8 477 aa15.14■□□□□ 0.01
PDGFRB-201ENST00000261799 LIG4P49917 911 aa15.14■□□□□ 0.01
PDGFRB-201ENST00000261799 MIS18BP1Q6P0N0 1132 aa15.14■□□□□ 0.01
PDGFRB-201ENST00000261799 CEP63Q96MT8 703 aa15.14■□□□□ 0.01
PDGFRB-201ENST00000261799 CETN3O15182 167 aa15.14■□□□□ 0.01
PDGFRB-201ENST00000261799 CRCPO75575 148 aa15.14■□□□□ 0.01
PDGFRB-201ENST00000261799 RNASELQ05823 741 aaKnown RBP15.14■□□□□ 0.01
PDGFRB-201ENST00000261799 XKR9Q5GH70 373 aa15.14■□□□□ 0.01
PDGFRB-201ENST00000261799 CEP112Q8N8E3 955 aa15.14■□□□□ 0.01
PDGFRB-201ENST00000261799 CCDC42Q96M95 316 aa15.14■□□□□ 0.01
PDGFRB-201ENST00000261799 DHX36Q9H2U1 1008 aaKnown RBP15.14■□□□□ 0.01
PDGFRB-201ENST00000261799 MTUS1Q9ULD2 1270 aa15.14■□□□□ 0.01
PDGFRB-201ENST00000261799 CTNND2Q9UQB3 1225 aa15.14■□□□□ 0.01
PDGFRB-201ENST00000261799 GCC2Q8IWJ2 1684 aa15.13■□□□□ 0.01
PDGFRB-201ENST00000261799 USP17L12C9JPN9 530 aa15.13■□□□□ 0.01
PDGFRB-201ENST00000261799 USP17L21D6R901 530 aa15.13■□□□□ 0.01
PDGFRB-201ENST00000261799 POLGP54098 1239 aaPredicted RBP15.13■□□□□ 0.01
PDGFRB-201ENST00000261799 METTL23Q86XA0 190 aa15.13■□□□□ 0.01
PDGFRB-201ENST00000261799 CGNQ9P2M7 1197 aaKnown RBP15.13■□□□□ 0.01
PDGFRB-201ENST00000261799 UQCRHLA0A096LP55 91 aa15.13■□□□□ 0.01
PDGFRB-201ENST00000261799 SESTD1Q86VW0 696 aa15.13■□□□□ 0.01
PDGFRB-201ENST00000261799 USP25Q9UHP3 1055 aa15.13■□□□□ 0.01
PDGFRB-201ENST00000261799 CCDC66A2RUB6 948 aa15.13■□□□□ 0.01
PDGFRB-201ENST00000261799 RIOK3O14730 519 aaKnown RBP15.13■□□□□ 0.01
PDGFRB-201ENST00000261799 EXOC3O60645 756 aa15.13■□□□□ 0.01
PDGFRB-201ENST00000261799 APOBEC3FQ8IUX4 373 aaKnown RBP15.13■□□□□ 0.01
PDGFRB-201ENST00000261799 STMN4Q9H169 189 aaPredicted RBP15.13■□□□□ 0.01
PDGFRB-201ENST00000261799 RPS6KA4O75676 772 aa15.13■□□□□ 0.01
PDGFRB-201ENST00000261799 ADRA2BP18089 450 aa15.13■□□□□ 0.01
PDGFRB-201ENST00000261799 TSGA10Q9BZW7 698 aa15.13■□□□□ 0.01
PDGFRB-201ENST00000261799 AKT3Q9Y243 479 aa15.13■□□□□ 0.01
PDGFRB-201ENST00000261799 SPATA31A3Q5VYP0 1347 aa15.13■□□□□ 0.01
PDGFRB-201ENST00000261799 JAKMIP2Q96AA8 810 aa15.12■□□□□ 0.01
PDGFRB-201ENST00000261799 ADGRL3Q9HAR2 1447 aa15.12■□□□□ 0.01
PDGFRB-201ENST00000261799 TARBP1Q13395 1621 aaKnown RBP15.12■□□□□ 0.01
PDGFRB-201ENST00000261799 TNNI1P19237 187 aa15.12■□□□□ 0.01
PDGFRB-201ENST00000261799 LLPHQ9BRT6 129 aaKnown RBP15.12■□□□□ 0.01
PDGFRB-201ENST00000261799 NOC4LQ9BVI4 516 aaKnown RBP15.12■□□□□ 0.01
PDGFRB-201ENST00000261799 COA1Q9GZY4 146 aa15.12■□□□□ 0.01
PDGFRB-201ENST00000261799 SUGCTQ9HAC7 445 aa15.12■□□□□ 0.01
PDGFRB-201ENST00000261799 ATP7BP35670 1465 aa15.12■□□□□ 0.01
PDGFRB-201ENST00000261799 SHROOM2Q13796 1616 aa15.12■□□□□ 0.01
PDGFRB-201ENST00000261799 PSDA5PKW4 1024 aaPredicted RBP15.12■□□□□ 0.01
PDGFRB-201ENST00000261799 CD19P15391 556 aa15.12■□□□□ 0.01
PDGFRB-201ENST00000261799 GCNAQ96QF7 691 aa15.12■□□□□ 0.01
PDGFRB-201ENST00000261799 UVSSAQ2YD98 709 aa15.12■□□□□ 0.01
PDGFRB-201ENST00000261799 SEPT14Q6ZU15 432 aa15.12■□□□□ 0.01
PDGFRB-201ENST00000261799 IPO4Q8TEX9 1081 aaKnown RBP15.12■□□□□ 0.01
PDGFRB-201ENST00000261799 PPP1R7Q15435 360 aa15.12■□□□□ 0.01
PDGFRB-201ENST00000261799 CABP7Q86V35 215 aa15.12■□□□□ 0.01
PDGFRB-201ENST00000261799 DSCC1Q9BVC3 393 aa15.12■□□□□ 0.01
PDGFRB-201ENST00000261799 GREM2Q9H772 168 aa15.12■□□□□ 0.01
PDGFRB-201ENST00000261799 MAP3K4Q9Y6R4 1608 aa15.11■□□□□ 0.01
PDGFRB-201ENST00000261799 TYW5A2RUC4 315 aaKnown RBP15.11■□□□□ 0.01
PDGFRB-201ENST00000261799 TLR3O15455 904 aaKnown RBP15.11■□□□□ 0.01
PDGFRB-201ENST00000261799 MYL3P08590 195 aa15.11■□□□□ 0.01
PDGFRB-201ENST00000261799 CCDC175P0C221 793 aa15.11■□□□□ 0.01
PDGFRB-201ENST00000261799 KIAA1841Q6NSI8 718 aa15.11■□□□□ 0.01
PDGFRB-201ENST00000261799 ZBTB33Q86T24 672 aa15.11■□□□□ 0.01
PDGFRB-201ENST00000261799 FTOQ9C0B1 505 aaKnown RBP eCLIP15.11■□□□□ 0.01
PDGFRB-201ENST00000261799 SRP68Q9UHB9 627 aaKnown RBP15.11■□□□□ 0.01
PDGFRB-201ENST00000261799 PTGS1P23219 599 aa15.11■□□□□ 0.01
PDGFRB-201ENST00000261799 KIF5AQ12840 1032 aa15.11■□□□□ 0.01
PDGFRB-201ENST00000261799 POLA2Q14181 598 aa15.11■□□□□ 0.01
PDGFRB-201ENST00000261799 PRR16Q569H4 304 aa15.11■□□□□ 0.01
PDGFRB-201ENST00000261799 PLA2G4DQ86XP0 818 aa15.11■□□□□ 0.01
PDGFRB-201ENST00000261799 TRMT1Q9NXH9 659 aaKnown RBP15.11■□□□□ 0.01
PDGFRB-201ENST00000261799 PTPRTO14522 1441 aa15.11■□□□□ 0.01
PDGFRB-201ENST00000261799 ARHGEF37A1IGU5 675 aa15.11■□□□□ 0.01
PDGFRB-201ENST00000261799 USP17L8P0C7I0 530 aa15.11■□□□□ 0.01
PDGFRB-201ENST00000261799 TBC1D2Q9BYX2 928 aa15.11■□□□□ 0.01
PDGFRB-201ENST00000261799 NPC1L1Q9UHC9 1359 aa15.11■□□□□ 0.01
PDGFRB-201ENST00000261799 HSF2BPO75031 334 aa15.11■□□□□ 0.01
PDGFRB-201ENST00000261799 PCP11498 1178 aaKnown RBP15.11■□□□□ 0.01
PDGFRB-201ENST00000261799 KCNQ4P56696 695 aa15.11■□□□□ 0.01
PDGFRB-201ENST00000261799 STK25O00506 426 aa15.1■□□□□ 0.01
PDGFRB-201ENST00000261799 ATP5JP18859 108 aa15.1■□□□□ 0.01
PDGFRB-201ENST00000261799 STX17P56962 302 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms