RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 RNF26Q9BY78 433 aaPredicted RBP18.68■□□□□ 0.58
TM9SF1-201ENST00000261789 COL1A1P02452 1464 aaPredicted RBP18.68■□□□□ 0.58
TM9SF1-201ENST00000261789 CLCN6P51797 869 aa18.67■□□□□ 0.58
TM9SF1-201ENST00000261789 FUT2Q10981 343 aa18.67■□□□□ 0.58
TM9SF1-201ENST00000261789 KRT222Q8N1A0 295 aa18.67■□□□□ 0.58
TM9SF1-201ENST00000261789 SYMPKQ92797 1274 aaKnown RBP18.67■□□□□ 0.58
TM9SF1-201ENST00000261789 CEP131Q9UPN4 1083 aa18.67■□□□□ 0.58
TM9SF1-201ENST00000261789 PARP3Q9Y6F1 533 aa18.67■□□□□ 0.58
TM9SF1-201ENST00000261789 CCP110O43303 1012 aa18.67■□□□□ 0.58
TM9SF1-201ENST00000261789 PHF20Q9BVI0 1012 aa18.67■□□□□ 0.58
TM9SF1-201ENST00000261789 KCNQ4P56696 695 aa18.66■□□□□ 0.58
TM9SF1-201ENST00000261789 GNG11P61952 73 aa18.66■□□□□ 0.58
TM9SF1-201ENST00000261789 SLC4A8Q2Y0W8 1093 aa18.66■□□□□ 0.58
TM9SF1-201ENST00000261789 PARP10Q53GL7 1025 aa18.66■□□□□ 0.58
TM9SF1-201ENST00000261789 SPATA20Q8TB22 786 aa18.66■□□□□ 0.58
TM9SF1-201ENST00000261789 CPLX3Q8WVH0 158 aa18.66■□□□□ 0.58
TM9SF1-201ENST00000261789 MYH14Q7Z406 1995 aaKnown RBP18.66■□□□□ 0.58
TM9SF1-201ENST00000261789 DOT1LQ8TEK3 1739 aa18.66■□□□□ 0.58
TM9SF1-201ENST00000261789 ADAMTS3O15072 1205 aa18.66■□□□□ 0.58
TM9SF1-201ENST00000261789 ZSCAN12O43309 604 aa18.66■□□□□ 0.58
TM9SF1-201ENST00000261789 MYO1BO43795 1136 aa18.66■□□□□ 0.58
TM9SF1-201ENST00000261789 VEGFAP15692 232 aaPredicted RBP18.66■□□□□ 0.58
TM9SF1-201ENST00000261789 KRT2P35908 639 aa18.66■□□□□ 0.58
TM9SF1-201ENST00000261789 PLCD1P51178 756 aa18.66■□□□□ 0.58
TM9SF1-201ENST00000261789 NUTM2AQ8IVF1 878 aaPredicted RBP18.66■□□□□ 0.58
TM9SF1-201ENST00000261789 KLRK1P26718 216 aa18.65■□□□□ 0.58
TM9SF1-201ENST00000261789 NR1I3Q14994 352 aa18.65■□□□□ 0.58
TM9SF1-201ENST00000261789 KARSQ15046 597 aaKnown RBP18.65■□□□□ 0.58
TM9SF1-201ENST00000261789 ERFEQ4G0M1 354 aa18.65■□□□□ 0.58
TM9SF1-201ENST00000261789 BCL9LQ86UU0 1499 aa18.65■□□□□ 0.58
TM9SF1-201ENST00000261789 MNS1Q8NEH6 495 aa18.65■□□□□ 0.58
TM9SF1-201ENST00000261789 UBXN4Q92575 508 aa18.65■□□□□ 0.58
TM9SF1-201ENST00000261789 PAGE5Q96GU1 130 aa18.65■□□□□ 0.58
TM9SF1-201ENST00000261789 IRX2Q9BZI1 471 aaPredicted RBP18.65■□□□□ 0.58
TM9SF1-201ENST00000261789 DACH1Q9UI36 760 aa18.65■□□□□ 0.58
TM9SF1-201ENST00000261789 CICQ96RK0 1608 aaPredicted RBP18.65■□□□□ 0.58
TM9SF1-201ENST00000261789 A0A0U1RQJ8 604 aa18.65■□□□□ 0.58
TM9SF1-201ENST00000261789 USP17L12C9JPN9 530 aa18.65■□□□□ 0.58
TM9SF1-201ENST00000261789 USP17L21D6R901 530 aa18.65■□□□□ 0.58
TM9SF1-201ENST00000261789 TROAPQ12815 778 aa18.65■□□□□ 0.58
TM9SF1-201ENST00000261789 BICDL1Q6ZP65 573 aa18.65■□□□□ 0.58
TM9SF1-201ENST00000261789 ZNF771Q7L3S4 317 aaPredicted RBP18.65■□□□□ 0.58
TM9SF1-201ENST00000261789 CATIPQ7Z7H3 387 aa18.65■□□□□ 0.58
TM9SF1-201ENST00000261789 ATRIPQ8WXE1 791 aa18.65■□□□□ 0.58
TM9SF1-201ENST00000261789 AATFQ9NY61 560 aaKnown RBP eCLIP18.65■□□□□ 0.58
TM9SF1-201ENST00000261789 ANAPC4Q9UJX5 808 aa18.65■□□□□ 0.58
TM9SF1-201ENST00000261789 RTL9Q8NET4 1388 aa18.64■□□□□ 0.58
TM9SF1-201ENST00000261789 SOWAHDA6NJG2 315 aa18.64■□□□□ 0.58
TM9SF1-201ENST00000261789 STX10O60499 249 aa18.64■□□□□ 0.58
TM9SF1-201ENST00000261789 FAM47AQ5JRC9 791 aa18.64■□□□□ 0.58
TM9SF1-201ENST00000261789 FAM53CQ9NYF3 392 aa18.64■□□□□ 0.58
TM9SF1-201ENST00000261789 ZNF804BA4D1E1 1349 aa18.64■□□□□ 0.57
TM9SF1-201ENST00000261789 TUBB4AP04350 444 aa18.64■□□□□ 0.57
TM9SF1-201ENST00000261789 SLFN14P0C7P3 912 aa18.64■□□□□ 0.57
TM9SF1-201ENST00000261789 XBP1P17861 261 aa18.64■□□□□ 0.57
TM9SF1-201ENST00000261789 NPY5RQ15761 445 aa18.64■□□□□ 0.57
TM9SF1-201ENST00000261789 KANK3Q6NY19 840 aa18.64■□□□□ 0.57
TM9SF1-201ENST00000261789 CTR9Q6PD62 1173 aa18.64■□□□□ 0.57
TM9SF1-201ENST00000261789 APTXQ7Z2E3 356 aaKnown RBP18.64■□□□□ 0.57
TM9SF1-201ENST00000261789 TRIML1Q8N9V2 468 aa18.64■□□□□ 0.57
TM9SF1-201ENST00000261789 MTA3Q9BTC8 594 aa18.64■□□□□ 0.57
TM9SF1-201ENST00000261789 JAG2Q9Y219 1238 aa18.64■□□□□ 0.57
TM9SF1-201ENST00000261789 PHLPP1O60346 1717 aa18.63■□□□□ 0.57
TM9SF1-201ENST00000261789 ADAMTS2O95450 1211 aa18.63■□□□□ 0.57
TM9SF1-201ENST00000261789 DDB1Q16531 1140 aa18.63■□□□□ 0.57
TM9SF1-201ENST00000261789 ANKRD18AQ8IVF6 992 aa18.63■□□□□ 0.57
TM9SF1-201ENST00000261789 CDC5LQ99459 802 aaKnown RBP18.63■□□□□ 0.57
TM9SF1-201ENST00000261789 BLZF1Q9H2G9 400 aa18.63■□□□□ 0.57
TM9SF1-201ENST00000261789 PLCH1Q4KWH8 1693 aa18.63■□□□□ 0.57
TM9SF1-201ENST00000261789 PRPF3O43395 683 aaKnown RBP18.63■□□□□ 0.57
TM9SF1-201ENST00000261789 RCAN1P53805 252 aa18.63■□□□□ 0.57
TM9SF1-201ENST00000261789 FCHSD1Q86WN1 690 aa18.63■□□□□ 0.57
TM9SF1-201ENST00000261789 IQCA1Q86XH1 822 aa18.63■□□□□ 0.57
TM9SF1-201ENST00000261789 FAM84BQ96KN1 310 aaPredicted RBP18.63■□□□□ 0.57
TM9SF1-201ENST00000261789 MRPL44Q9H9J2 332 aaKnown RBP18.63■□□□□ 0.57
TM9SF1-201ENST00000261789 FHOD1Q9Y613 1164 aa18.63■□□□□ 0.57
TM9SF1-201ENST00000261789 A0A1B0GTH6 734 aa18.62■□□□□ 0.57
TM9SF1-201ENST00000261789 KCNQ2O43526 872 aa18.62■□□□□ 0.57
TM9SF1-201ENST00000261789 TADA3O75528 432 aa18.62■□□□□ 0.57
TM9SF1-201ENST00000261789 CASQ1P31415 396 aa18.62■□□□□ 0.57
TM9SF1-201ENST00000261789 RBL2Q08999 1139 aa18.62■□□□□ 0.57
TM9SF1-201ENST00000261789 DPYDQ12882 1025 aa18.62■□□□□ 0.57
TM9SF1-201ENST00000261789 PTGDRQ13258 359 aa18.62■□□□□ 0.57
TM9SF1-201ENST00000261789 SRBD1Q8N5C6 995 aaKnown RBP18.62■□□□□ 0.57
TM9SF1-201ENST00000261789 MARCH10Q8NA82 808 aaPredicted RBP18.62■□□□□ 0.57
TM9SF1-201ENST00000261789 CELF1Q92879 486 aaKnown RBP18.62■□□□□ 0.57
TM9SF1-201ENST00000261789 GNL3LQ9NVN8 582 aaKnown RBP18.62■□□□□ 0.57
TM9SF1-201ENST00000261789 CUL4BQ13620 913 aa18.62■□□□□ 0.57
TM9SF1-201ENST00000261789 MINPP1Q9UNW1 487 aa18.62■□□□□ 0.57
TM9SF1-201ENST00000261789 SYNRGQ9UMZ2 1314 aa18.61■□□□□ 0.57
TM9SF1-201ENST00000261789 SEC31AO94979 1220 aaKnown RBP18.61■□□□□ 0.57
TM9SF1-201ENST00000261789 CYP2D6P10635 497 aa18.61■□□□□ 0.57
TM9SF1-201ENST00000261789 ERCC5P28715 1186 aaPredicted RBP18.61■□□□□ 0.57
TM9SF1-201ENST00000261789 CAVIN4Q5BKX8 364 aa18.61■□□□□ 0.57
TM9SF1-201ENST00000261789 SH3RF1Q7Z6J0 888 aa18.61■□□□□ 0.57
TM9SF1-201ENST00000261789 CCDC24Q8N4L8 307 aa18.61■□□□□ 0.57
TM9SF1-201ENST00000261789 LZTFL1Q9NQ48 299 aa18.61■□□□□ 0.57
TM9SF1-201ENST00000261789 CACNA1SQ13698 1873 aa18.61■□□□□ 0.57
TM9SF1-201ENST00000261789 CDC25AP30304 524 aa18.61■□□□□ 0.57
TM9SF1-201ENST00000261789 TTC38Q5R3I4 469 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms