RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 IQSEC2Q5JU85 1478 aa18.14■□□□□ 0.49
SREBF1-201ENST00000261646 CTDSPL2Q05D32 466 aa18.14■□□□□ 0.49
SREBF1-201ENST00000261646 PPRC1Q5VV67 1664 aaKnown RBP18.14■□□□□ 0.49
SREBF1-201ENST00000261646 NSRP1Q9H0G5 558 aaKnown RBP18.13■□□□□ 0.49
SREBF1-201ENST00000261646 LAMC1P11047 1609 aa18.13■□□□□ 0.49
SREBF1-201ENST00000261646 KCNJ18B7U540 433 aa18.13■□□□□ 0.49
SREBF1-201ENST00000261646 PDE4DQ08499 809 aa18.13■□□□□ 0.49
SREBF1-201ENST00000261646 PAK2Q13177 524 aa18.13■□□□□ 0.49
SREBF1-201ENST00000261646 KCNJ12Q14500 433 aa18.13■□□□□ 0.49
SREBF1-201ENST00000261646 IFIH1Q9BYX4 1025 aaKnown RBP18.13■□□□□ 0.49
SREBF1-201ENST00000261646 CCDC172P0C7W6 258 aa18.13■□□□□ 0.49
SREBF1-201ENST00000261646 PDE4BQ07343 736 aa18.13■□□□□ 0.49
SREBF1-201ENST00000261646 IRX2Q9BZI1 471 aaPredicted RBP18.13■□□□□ 0.49
SREBF1-201ENST00000261646 KDRP35968 1356 aa18.13■□□□□ 0.49
SREBF1-201ENST00000261646 VIMP08670 466 aaKnown RBP18.12■□□□□ 0.49
SREBF1-201ENST00000261646 LRRC24Q50LG9 513 aa18.12■□□□□ 0.49
SREBF1-201ENST00000261646 TYW1BQ6NUM6 668 aa18.12■□□□□ 0.49
SREBF1-201ENST00000261646 ARMT1Q9H993 441 aa18.12■□□□□ 0.49
SREBF1-201ENST00000261646 COPRSQ9NQ92 184 aa18.12■□□□□ 0.49
SREBF1-201ENST00000261646 SAMD15Q9P1V8 674 aa18.12■□□□□ 0.49
SREBF1-201ENST00000261646 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.12■□□□□ 0.49
SREBF1-201ENST00000261646 ATP10DQ9P241 1426 aa18.12■□□□□ 0.49
SREBF1-201ENST00000261646 CALML3P27482 149 aa18.12■□□□□ 0.49
SREBF1-201ENST00000261646 ACSBG1Q96GR2 724 aa18.12■□□□□ 0.49
SREBF1-201ENST00000261646 MAN1B1Q9UKM7 699 aa18.12■□□□□ 0.49
SREBF1-201ENST00000261646 KIF4AO95239 1232 aa18.12■□□□□ 0.49
SREBF1-201ENST00000261646 SRLQ86TD4 932 aa18.12■□□□□ 0.49
SREBF1-201ENST00000261646 ENOX1Q8TC92 643 aaKnown RBP18.12■□□□□ 0.49
SREBF1-201ENST00000261646 FAM207AQ9NSI2 230 aaPredicted RBP18.12■□□□□ 0.49
SREBF1-201ENST00000261646 PPP6R2O75170 966 aa18.12■□□□□ 0.49
SREBF1-201ENST00000261646 PRDM1O75626 825 aa18.12■□□□□ 0.49
SREBF1-201ENST00000261646 MORC3Q14149 939 aa18.11■□□□□ 0.49
SREBF1-201ENST00000261646 DZIP1Q86YF9 867 aaKnown RBP18.11■□□□□ 0.49
SREBF1-201ENST00000261646 ANKRD13CQ8N6S4 541 aa18.11■□□□□ 0.49
SREBF1-201ENST00000261646 NOX5Q96PH1 765 aa18.11■□□□□ 0.49
SREBF1-201ENST00000261646 HGSO14964 777 aaPredicted RBP18.11■□□□□ 0.49
SREBF1-201ENST00000261646 ZPR1O75312 459 aa18.11■□□□□ 0.49
SREBF1-201ENST00000261646 KRT13P13646 458 aa18.11■□□□□ 0.49
SREBF1-201ENST00000261646 C2CD5Q86YS7 1000 aa18.11■□□□□ 0.49
SREBF1-201ENST00000261646 PLBD2Q8NHP8 589 aa18.11■□□□□ 0.49
SREBF1-201ENST00000261646 DPF2Q92785 391 aa18.11■□□□□ 0.49
SREBF1-201ENST00000261646 NUP58Q9BVL2 599 aa18.11■□□□□ 0.49
SREBF1-201ENST00000261646 TRIM31Q9BZY9 425 aa18.11■□□□□ 0.49
SREBF1-201ENST00000261646 TADA2BQ86TJ2 420 aa18.11■□□□□ 0.49
SREBF1-201ENST00000261646 SMARCC2Q8TAQ2 1214 aa18.11■□□□□ 0.49
SREBF1-201ENST00000261646 A2ML1A8K2U0 1454 aa18.1■□□□□ 0.49
SREBF1-201ENST00000261646 CHGBP05060 677 aa18.1■□□□□ 0.49
SREBF1-201ENST00000261646 ERCC5P28715 1186 aaPredicted RBP18.1■□□□□ 0.49
SREBF1-201ENST00000261646 RAPGEF1Q13905 1077 aa18.1■□□□□ 0.49
SREBF1-201ENST00000261646 CFAP221Q4G0U5 840 aa18.1■□□□□ 0.49
SREBF1-201ENST00000261646 CADPS2Q86UW7 1296 aa18.1■□□□□ 0.49
SREBF1-201ENST00000261646 PAIP2Q9BPZ3 127 aaKnown RBP18.1■□□□□ 0.49
SREBF1-201ENST00000261646 JPH2Q9BR39 696 aaPredicted RBP18.1■□□□□ 0.49
SREBF1-201ENST00000261646 GOLGA8KD6RF30 607 aa18.1■□□□□ 0.49
SREBF1-201ENST00000261646 ZMYM1Q5SVZ6 1142 aa18.1■□□□□ 0.49
SREBF1-201ENST00000261646 FERMT2Q96AC1 680 aa18.1■□□□□ 0.49
SREBF1-201ENST00000261646 TMEM51Q9NW97 253 aa18.1■□□□□ 0.49
SREBF1-201ENST00000261646 JAG2Q9Y219 1238 aa18.1■□□□□ 0.49
SREBF1-201ENST00000261646 PLA2G4AP47712 749 aa18.1■□□□□ 0.49
SREBF1-201ENST00000261646 EPHA10Q5JZY3 1008 aa18.1■□□□□ 0.49
SREBF1-201ENST00000261646 MMS22LQ6ZRQ5 1243 aa18.1■□□□□ 0.49
SREBF1-201ENST00000261646 PUS3Q9BZE2 481 aaKnown RBP18.1■□□□□ 0.49
SREBF1-201ENST00000261646 IQGAP1P46940 1657 aa18.1■□□□□ 0.49
SREBF1-201ENST00000261646 ALKQ9UM73 1620 aa18.1■□□□□ 0.49
SREBF1-201ENST00000261646 RTL9Q8NET4 1388 aa18.1■□□□□ 0.49
SREBF1-201ENST00000261646 BUB1BO60566 1050 aaPredicted RBP18.09■□□□□ 0.49
SREBF1-201ENST00000261646 ZMYM6O95789 1325 aa18.09■□□□□ 0.49
SREBF1-201ENST00000261646 NEBLO76041 1014 aa18.09■□□□□ 0.49
SREBF1-201ENST00000261646 IFT88Q13099 833 aa18.09■□□□□ 0.49
SREBF1-201ENST00000261646 TRIM58Q8NG06 486 aa18.09■□□□□ 0.49
SREBF1-201ENST00000261646 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.09■□□□□ 0.497e-7■■■■□ 20.8
SREBF1-201ENST00000261646 MAST3O60307 1309 aa18.09■□□□□ 0.49
SREBF1-201ENST00000261646 COPB1P53618 953 aaKnown RBP18.09■□□□□ 0.49
SREBF1-201ENST00000261646 RUFY4Q6ZNE9 571 aa18.09■□□□□ 0.49
SREBF1-201ENST00000261646 TSPOAP1O95153 1857 aa18.09■□□□□ 0.49
SREBF1-201ENST00000261646 CALM1P0DP23 149 aa18.09■□□□□ 0.49
SREBF1-201ENST00000261646 CALM2P0DP24 149 aa18.09■□□□□ 0.49
SREBF1-201ENST00000261646 CALM3P0DP25 149 aa18.09■□□□□ 0.49
SREBF1-201ENST00000261646 ZNF76P36508 570 aa18.09■□□□□ 0.49
SREBF1-201ENST00000261646 ZNF532Q9HCE3 1301 aa18.08■□□□□ 0.49
SREBF1-201ENST00000261646 MCTP2Q6DN12 878 aa18.08■□□□□ 0.49
SREBF1-201ENST00000261646 LRRC45Q96CN5 670 aa18.08■□□□□ 0.49
SREBF1-201ENST00000261646 CSRNP2Q9H175 543 aa18.08■□□□□ 0.49
SREBF1-201ENST00000261646 MYO1AQ9UBC5 1043 aa18.08■□□□□ 0.49
SREBF1-201ENST00000261646 CEP104O60308 925 aa18.08■□□□□ 0.48
SREBF1-201ENST00000261646 GNAT2P19087 354 aa18.08■□□□□ 0.48
SREBF1-201ENST00000261646 CCDC25Q86WR0 208 aa18.08■□□□□ 0.48
SREBF1-201ENST00000261646 FBF1Q8TES7 1133 aa18.08■□□□□ 0.48
SREBF1-201ENST00000261646 MRFAP1Q9Y605 127 aa18.08■□□□□ 0.48
SREBF1-201ENST00000261646 TRAF5O00463 557 aa18.08■□□□□ 0.48
SREBF1-201ENST00000261646 CCDC6Q16204 474 aa18.08■□□□□ 0.48
SREBF1-201ENST00000261646 KRT71Q3SY84 523 aa18.08■□□□□ 0.48
SREBF1-201ENST00000261646 APOA5Q6Q788 366 aa18.08■□□□□ 0.48
SREBF1-201ENST00000261646 PTPRMP28827 1452 aa18.07■□□□□ 0.48
SREBF1-201ENST00000261646 EXOC5O00471 708 aa18.07■□□□□ 0.48
SREBF1-201ENST00000261646 NBPF14Q5TI25 921 aa18.07■□□□□ 0.48
SREBF1-201ENST00000261646 RRAGAQ7L523 313 aa18.07■□□□□ 0.48
SREBF1-201ENST00000261646 ZNF287Q9HBT7 754 aa18.07■□□□□ 0.48
SREBF1-201ENST00000261646 IRS4O14654 1257 aaPredicted RBP18.07■□□□□ 0.48
SREBF1-201ENST00000261646 NAPAP54920 295 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms