RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 NOM1Q5C9Z4 860 aaKnown RBP12.31□□□□□ -0.44
CHRNA1-201ENST00000261007 MYSM1Q5VVJ2 828 aa12.31□□□□□ -0.44
CHRNA1-201ENST00000261007 ALG1Q9BT22 464 aa12.31□□□□□ -0.44
CHRNA1-201ENST00000261007 TUBB2BQ9BVA1 445 aa12.31□□□□□ -0.44
CHRNA1-201ENST00000261007 YY1AP1Q9H869 796 aa12.31□□□□□ -0.44
CHRNA1-201ENST00000261007 ZSWIM5Q9P217 1185 aa12.31□□□□□ -0.44
CHRNA1-201ENST00000261007 RSPH14Q9UHP6 348 aa12.31□□□□□ -0.44
CHRNA1-201ENST00000261007 CLIC4Q9Y696 253 aa12.31□□□□□ -0.44
CHRNA1-201ENST00000261007 MAST2Q6P0Q8 1798 aa12.31□□□□□ -0.44
CHRNA1-201ENST00000261007 FAM237AA0A1B0GTK4 181 aa12.3□□□□□ -0.44
CHRNA1-201ENST00000261007 NOP2P46087 812 aaKnown RBP12.3□□□□□ -0.44
CHRNA1-201ENST00000261007 FOSBP53539 338 aa12.3□□□□□ -0.44
CHRNA1-201ENST00000261007 GNG11P61952 73 aa12.3□□□□□ -0.44
CHRNA1-201ENST00000261007 KIF23Q02241 960 aaPredicted RBP12.3□□□□□ -0.44
CHRNA1-201ENST00000261007 PPARAQ07869 468 aa12.3□□□□□ -0.44
CHRNA1-201ENST00000261007 WTAPQ15007 396 aa12.3□□□□□ -0.44
CHRNA1-201ENST00000261007 LONRF2Q1L5Z9 754 aa12.3□□□□□ -0.44
CHRNA1-201ENST00000261007 CFAP100Q494V2 611 aa12.3□□□□□ -0.44
CHRNA1-201ENST00000261007 AXDND1Q5T1B0 1012 aaPredicted RBP12.3□□□□□ -0.44
CHRNA1-201ENST00000261007 BICDL1Q6ZP65 573 aa12.3□□□□□ -0.44
CHRNA1-201ENST00000261007 TRIM22Q8IYM9 498 aa12.3□□□□□ -0.44
CHRNA1-201ENST00000261007 GOLGA6L1Q8N7Z2 621 aa12.3□□□□□ -0.44
CHRNA1-201ENST00000261007 JMYQ8N9B5 988 aa12.3□□□□□ -0.44
CHRNA1-201ENST00000261007 ESR2Q92731 530 aa12.3□□□□□ -0.44
CHRNA1-201ENST00000261007 KIFC2Q96AC6 838 aa12.3□□□□□ -0.44
CHRNA1-201ENST00000261007 ABCF2Q9UG63 623 aa12.3□□□□□ -0.44
CHRNA1-201ENST00000261007 BIN1O00499 593 aa12.3□□□□□ -0.44
CHRNA1-201ENST00000261007 ATP1A3P13637 1013 aa12.3□□□□□ -0.44
CHRNA1-201ENST00000261007 PFKFB1P16118 471 aa12.3□□□□□ -0.44
CHRNA1-201ENST00000261007 IFNAR1P17181 557 aa12.3□□□□□ -0.44
CHRNA1-201ENST00000261007 USP5P45974 858 aa12.3□□□□□ -0.44
CHRNA1-201ENST00000261007 GYG1P46976 350 aa12.3□□□□□ -0.44
CHRNA1-201ENST00000261007 GUCY1B3Q02153 619 aa12.3□□□□□ -0.44
CHRNA1-201ENST00000261007 SSRP1Q08945 709 aaKnown RBP12.3□□□□□ -0.44
CHRNA1-201ENST00000261007 SPTY2D1Q68D10 685 aaPredicted RBP12.3□□□□□ -0.44
CHRNA1-201ENST00000261007 MICU3Q86XE3 530 aa12.3□□□□□ -0.44
CHRNA1-201ENST00000261007 ELOA2Q8IYF1 753 aaPredicted RBP12.3□□□□□ -0.44
CHRNA1-201ENST00000261007 DPF2Q92785 391 aa12.3□□□□□ -0.44
CHRNA1-201ENST00000261007 CELF1Q92879 486 aaKnown RBP12.3□□□□□ -0.44
CHRNA1-201ENST00000261007 FAM84BQ96KN1 310 aaPredicted RBP12.3□□□□□ -0.44
CHRNA1-201ENST00000261007 GJD4Q96KN9 370 aaPredicted RBP12.3□□□□□ -0.44
CHRNA1-201ENST00000261007 BAG1Q99933 345 aaPredicted RBP12.3□□□□□ -0.44
CHRNA1-201ENST00000261007 RRP15Q9Y3B9 282 aaKnown RBP12.3□□□□□ -0.44
CHRNA1-201ENST00000261007 MYH13Q9UKX3 1938 aa12.3□□□□□ -0.44
CHRNA1-201ENST00000261007 CACNA1SQ13698 1873 aa12.3□□□□□ -0.44
CHRNA1-201ENST00000261007 FMNL1O95466 1100 aaPredicted RBP12.29□□□□□ -0.44
CHRNA1-201ENST00000261007 HIBADHP31937 336 aaKnown RBP12.29□□□□□ -0.44
CHRNA1-201ENST00000261007 RFC4P35249 363 aa12.29□□□□□ -0.44
CHRNA1-201ENST00000261007 CTDSPL2Q05D32 466 aa12.29□□□□□ -0.44
CHRNA1-201ENST00000261007 GNL2Q13823 731 aaKnown RBP12.29□□□□□ -0.44
CHRNA1-201ENST00000261007 ANO1Q5XXA6 986 aa12.29□□□□□ -0.44
CHRNA1-201ENST00000261007 OLFM4Q6UX06 510 aa12.29□□□□□ -0.44
CHRNA1-201ENST00000261007 LEKR1Q6ZMV7 388 aa12.29□□□□□ -0.44
CHRNA1-201ENST00000261007 C3orf67Q6ZVT6 689 aa12.29□□□□□ -0.44
CHRNA1-201ENST00000261007 POTEDQ86YR6 584 aa12.29□□□□□ -0.44
CHRNA1-201ENST00000261007 CCDC34Q96HJ3 373 aa12.29□□□□□ -0.44
CHRNA1-201ENST00000261007 UBAC1Q9BSL1 405 aa12.29□□□□□ -0.44
CHRNA1-201ENST00000261007 HPSEQ9Y251 543 aa12.29□□□□□ -0.44
CHRNA1-201ENST00000261007 SBF2Q86WG5 1849 aa12.29□□□□□ -0.44
CHRNA1-201ENST00000261007 ONECUT3O60422 494 aaPredicted RBP12.29□□□□□ -0.44
CHRNA1-201ENST00000261007 EIF3JO75822 258 aaKnown RBP12.29□□□□□ -0.44
CHRNA1-201ENST00000261007 TUBBP07437 444 aa12.29□□□□□ -0.44
CHRNA1-201ENST00000261007 SLC39A14Q15043 492 aa12.29□□□□□ -0.44
CHRNA1-201ENST00000261007 NTRK3Q16288 839 aa12.29□□□□□ -0.44
CHRNA1-201ENST00000261007 RTN1Q16799 776 aa12.29□□□□□ -0.44
CHRNA1-201ENST00000261007 TRAPPC3LQ5T215 181 aa12.29□□□□□ -0.44
CHRNA1-201ENST00000261007 HDXQ7Z353 690 aa12.29□□□□□ -0.44
CHRNA1-201ENST00000261007 ARHGEF1Q92888 912 aaKnown RBP12.29□□□□□ -0.44
CHRNA1-201ENST00000261007 WDR24Q96S15 920 aa12.29□□□□□ -0.44
CHRNA1-201ENST00000261007 RIOK1Q9BRS2 568 aaKnown RBP12.29□□□□□ -0.44
CHRNA1-201ENST00000261007 TOMM22Q9NS69 142 aa12.29□□□□□ -0.44
CHRNA1-201ENST00000261007 RAB21Q9UL25 225 aa12.29□□□□□ -0.44
CHRNA1-201ENST00000261007 COL1A1P02452 1464 aaPredicted RBP12.28□□□□□ -0.44
CHRNA1-201ENST00000261007 COL4A1P02462 1669 aa12.28□□□□□ -0.44
CHRNA1-201ENST00000261007 PRKAB2O43741 272 aa12.28□□□□□ -0.44
CHRNA1-201ENST00000261007 PPP6R2O75170 966 aa12.28□□□□□ -0.44
CHRNA1-201ENST00000261007 ERLIN1O75477 346 aa12.28□□□□□ -0.44
CHRNA1-201ENST00000261007 SYKP43405 635 aa12.28□□□□□ -0.44
CHRNA1-201ENST00000261007 LMAN1P49257 510 aa12.28□□□□□ -0.44
CHRNA1-201ENST00000261007 SAFBQ15424 915 aaKnown RBP eCLIP12.28□□□□□ -0.44
CHRNA1-201ENST00000261007 MEX3CQ5U5Q3 659 aaKnown RBP12.28□□□□□ -0.44
CHRNA1-201ENST00000261007 KRT40Q6A162 431 aa12.28□□□□□ -0.44
CHRNA1-201ENST00000261007 SRGAP1Q7Z6B7 1085 aa12.28□□□□□ -0.44
CHRNA1-201ENST00000261007 C10orf67Q8IYJ2 551 aa12.28□□□□□ -0.44
CHRNA1-201ENST00000261007 CEP112Q8N8E3 955 aa12.28□□□□□ -0.44
CHRNA1-201ENST00000261007 MIGA1Q8NAN2 632 aa12.28□□□□□ -0.44
CHRNA1-201ENST00000261007 MSANTD4Q8NCY6 345 aa12.28□□□□□ -0.44
CHRNA1-201ENST00000261007 SRP68Q9UHB9 627 aaKnown RBP12.28□□□□□ -0.44
CHRNA1-201ENST00000261007 MKRN1Q9UHC7 482 aaKnown RBP12.28□□□□□ -0.44
CHRNA1-201ENST00000261007 LEMD3Q9Y2U8 911 aa12.28□□□□□ -0.44
CHRNA1-201ENST00000261007 KIAA1551Q9HCM1 1747 aa12.28□□□□□ -0.44
CHRNA1-201ENST00000261007 DUOX1Q9NRD9 1551 aa12.28□□□□□ -0.44
CHRNA1-201ENST00000261007 H3BQF6 201 aa12.27□□□□□ -0.44
CHRNA1-201ENST00000261007 CALM1P0DP23 149 aa12.27□□□□□ -0.44
CHRNA1-201ENST00000261007 CALM2P0DP24 149 aa12.27□□□□□ -0.44
CHRNA1-201ENST00000261007 CALM3P0DP25 149 aa12.27□□□□□ -0.44
CHRNA1-201ENST00000261007 CDC27P30260 824 aa12.27□□□□□ -0.44
CHRNA1-201ENST00000261007 IRX3P78415 501 aaPredicted RBP12.27□□□□□ -0.44
CHRNA1-201ENST00000261007 PLCD3Q8N3E9 789 aa12.27□□□□□ -0.44
CHRNA1-201ENST00000261007 CRNKL1Q9BZJ0 848 aaKnown RBP12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms