RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 KCNG4Q8TDN1 519 aa20.47■□□□□ 0.87
SSB-201ENST00000260956 CYP2D7A0A087X1C5 515 aa20.46■□□□□ 0.87
SSB-201ENST00000260956 CCDC69A6NI79 296 aa20.46■□□□□ 0.87
SSB-201ENST00000260956 POLR3DP05423 398 aaPredicted RBP20.46■□□□□ 0.87
SSB-201ENST00000260956 PCP11498 1178 aaKnown RBP20.46■□□□□ 0.87
SSB-201ENST00000260956 PTPAQ15257 358 aa20.46■□□□□ 0.87
SSB-201ENST00000260956 ANO6Q4KMQ2 910 aa20.46■□□□□ 0.87
SSB-201ENST00000260956 ANO1Q5XXA6 986 aa20.46■□□□□ 0.87
SSB-201ENST00000260956 ZNF654Q8IZM8 581 aa20.46■□□□□ 0.87
SSB-201ENST00000260956 FSIP1Q8NA03 581 aa20.46■□□□□ 0.87
SSB-201ENST00000260956 CBX8Q9HC52 389 aa20.46■□□□□ 0.87
SSB-201ENST00000260956 CTAGE5O15320 804 aa20.45■□□□□ 0.86
SSB-201ENST00000260956 RPS12P25398 132 aaKnown RBP20.45■□□□□ 0.86
SSB-201ENST00000260956 EVX2Q03828 476 aa20.45■□□□□ 0.86
SSB-201ENST00000260956 FUT2Q10981 343 aa20.45■□□□□ 0.86
SSB-201ENST00000260956 AGBL3Q8NEM8 1001 aa20.45■□□□□ 0.86
SSB-201ENST00000260956 MRPS27Q92552 414 aaKnown RBP20.45■□□□□ 0.86
SSB-201ENST00000260956 MAP3K14Q99558 947 aa20.45■□□□□ 0.86
SSB-201ENST00000260956 ZKSCAN3Q9BRR0 538 aa20.45■□□□□ 0.86
SSB-201ENST00000260956 NAV1Q8NEY1 1877 aa20.45■□□□□ 0.86
SSB-201ENST00000260956 MROH7-TTC4A0A0A0MT08 1334 aa20.45■□□□□ 0.86
SSB-201ENST00000260956 TNKSO95271 1327 aa20.45■□□□□ 0.86
SSB-201ENST00000260956 ORC4O43929 436 aa20.44■□□□□ 0.86
SSB-201ENST00000260956 GUCY1A2P33402 732 aa20.44■□□□□ 0.86
SSB-201ENST00000260956 ME1P48163 572 aa20.44■□□□□ 0.86
SSB-201ENST00000260956 CHAF1AQ13111 956 aaPredicted RBP20.44■□□□□ 0.86
SSB-201ENST00000260956 RTN1Q16799 776 aa20.44■□□□□ 0.86
SSB-201ENST00000260956 RRP12Q5JTH9 1297 aaKnown RBP20.44■□□□□ 0.86
SSB-201ENST00000260956 KIAA0825Q8IV33 1275 aa20.44■□□□□ 0.86
SSB-201ENST00000260956 TMTC2Q8N394 836 aa20.44■□□□□ 0.86
SSB-201ENST00000260956 ENAHQ8N8S7 591 aaPredicted RBP20.44■□□□□ 0.86
SSB-201ENST00000260956 ESR2Q92731 530 aa20.44■□□□□ 0.86
SSB-201ENST00000260956 DCP1AQ9NPI6 582 aaPredicted RBP20.44■□□□□ 0.86
SSB-201ENST00000260956 MKRN1Q9UHC7 482 aaKnown RBP20.44■□□□□ 0.86
SSB-201ENST00000260956 SCN4AP35499 1836 aa20.44■□□□□ 0.86
SSB-201ENST00000260956 FAM237AA0A1B0GTK4 181 aa20.44■□□□□ 0.86
SSB-201ENST00000260956 SPTLC2O15270 562 aa20.44■□□□□ 0.86
SSB-201ENST00000260956 LMOD1P29536 600 aaPredicted RBP20.44■□□□□ 0.86
SSB-201ENST00000260956 ZNF280AP59817 542 aaPredicted RBP20.44■□□□□ 0.86
SSB-201ENST00000260956 SART3Q15020 963 aaKnown RBP20.44■□□□□ 0.86
SSB-201ENST00000260956 SLC39A14Q15043 492 aa20.44■□□□□ 0.86
SSB-201ENST00000260956 TBC1D10BQ4KMP7 808 aaPredicted RBP20.44■□□□□ 0.86
SSB-201ENST00000260956 SBK1Q52WX2 424 aa20.44■□□□□ 0.86
SSB-201ENST00000260956 EAPPQ56P03 285 aaPredicted RBP20.44■□□□□ 0.86
SSB-201ENST00000260956 CCDC73Q6ZRK6 1079 aa20.44■□□□□ 0.86
SSB-201ENST00000260956 SHISA4Q96DD7 197 aa20.44■□□□□ 0.86
SSB-201ENST00000260956 TOMM70O94826 608 aa20.43■□□□□ 0.86
SSB-201ENST00000260956 USP17L8P0C7I0 530 aa20.43■□□□□ 0.86
SSB-201ENST00000260956 MFSD14BQ5SR56 506 aa20.43■□□□□ 0.86
SSB-201ENST00000260956 CRACR2BQ8N4Y2 399 aaPredicted RBP20.43■□□□□ 0.86
SSB-201ENST00000260956 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.43■□□□□ 0.86
SSB-201ENST00000260956 ADARB2Q9NS39 739 aaKnown RBP20.43■□□□□ 0.86
SSB-201ENST00000260956 PCDHAC2Q9Y5I4 1007 aa20.43■□□□□ 0.86
SSB-201ENST00000260956 ASTN2O75129 1339 aaPredicted RBP20.43■□□□□ 0.86
SSB-201ENST00000260956 ROBO3Q96MS0 1386 aa20.42■□□□□ 0.86
SSB-201ENST00000260956 MINDY4BA8MYZ0 360 aa20.42■□□□□ 0.86
SSB-201ENST00000260956 SSRP1Q08945 709 aaKnown RBP20.42■□□□□ 0.86
SSB-201ENST00000260956 STK38Q15208 465 aa20.42■□□□□ 0.86
SSB-201ENST00000260956 RBM26Q5T8P6 1007 aaKnown RBP20.42■□□□□ 0.86
SSB-201ENST00000260956 LUZP1Q86V48 1076 aa20.42■□□□□ 0.86
SSB-201ENST00000260956 SLC26A6Q9BXS9 759 aa20.42■□□□□ 0.86
SSB-201ENST00000260956 F8W031 263 aaPredicted RBP20.41■□□□□ 0.86
SSB-201ENST00000260956 WDHD1O75717 1129 aaPredicted RBP20.41■□□□□ 0.86
SSB-201ENST00000260956 CAVIN2O95810 425 aa20.41■□□□□ 0.86
SSB-201ENST00000260956 NDUFA8P51970 172 aa20.41■□□□□ 0.86
SSB-201ENST00000260956 IQCB1Q15051 598 aa20.41■□□□□ 0.86
SSB-201ENST00000260956 FANCBQ8NB91 859 aa20.41■□□□□ 0.86
SSB-201ENST00000260956 ZSCAN10Q96SZ4 725 aaPredicted RBP20.41■□□□□ 0.86
SSB-201ENST00000260956 ATP8A2Q9NTI2 1148 aa20.41■□□□□ 0.86
SSB-201ENST00000260956 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.41■□□□□ 0.86
SSB-201ENST00000260956 PCNTO95613 3336 aa20.41■□□□□ 0.86
SSB-201ENST00000260956 USP17L12C9JPN9 530 aa20.41■□□□□ 0.86
SSB-201ENST00000260956 USP17L21D6R901 530 aa20.41■□□□□ 0.86
SSB-201ENST00000260956 H7C1D1 291 aa20.41■□□□□ 0.86
SSB-201ENST00000260956 MMP1P03956 469 aa20.41■□□□□ 0.86
SSB-201ENST00000260956 C11orf57Q6ZUT1 292 aaPredicted RBP20.41■□□□□ 0.86
SSB-201ENST00000260956 ADAMTSL1Q8N6G6 1762 aa20.4■□□□□ 0.86
SSB-201ENST00000260956 PPP6R2O75170 966 aa20.4■□□□□ 0.86
SSB-201ENST00000260956 CMA1P23946 247 aa20.4■□□□□ 0.86
SSB-201ENST00000260956 UBAC1Q9BSL1 405 aa20.4■□□□□ 0.86
SSB-201ENST00000260956 CRNKL1Q9BZJ0 848 aaKnown RBP20.4■□□□□ 0.86
SSB-201ENST00000260956 DNAJC25Q9H1X3 360 aa20.4■□□□□ 0.86
SSB-201ENST00000260956 AATFQ9NY61 560 aaKnown RBP eCLIP20.4■□□□□ 0.86
SSB-201ENST00000260956 HPSEQ9Y251 543 aa20.4■□□□□ 0.86
SSB-201ENST00000260956 KINO60870 393 aaKnown RBP20.39■□□□□ 0.86
SSB-201ENST00000260956 FKBP1AP62942 108 aaKnown RBP20.39■□□□□ 0.86
SSB-201ENST00000260956 TROAPQ12815 778 aa20.39■□□□□ 0.86
SSB-201ENST00000260956 PPP2R5BQ15173 497 aa20.39■□□□□ 0.86
SSB-201ENST00000260956 SYNE3Q6ZMZ3 975 aa20.39■□□□□ 0.86
SSB-201ENST00000260956 USP50Q70EL3 339 aaPredicted RBP20.39■□□□□ 0.86
SSB-201ENST00000260956 PNMA8AQ86V59 439 aaPredicted RBP20.39■□□□□ 0.86
SSB-201ENST00000260956 STK11IPQ8N1F8 1099 aa20.39■□□□□ 0.86
SSB-201ENST00000260956 WASF1Q92558 559 aa20.39■□□□□ 0.86
SSB-201ENST00000260956 MYOZ2Q9NPC6 264 aa20.39■□□□□ 0.86
SSB-201ENST00000260956 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.39■□□□□ 0.86
SSB-201ENST00000260956 TOMM22Q9NS69 142 aa20.39■□□□□ 0.86
SSB-201ENST00000260956 FOCADQ5VW36 1801 aa20.39■□□□□ 0.85
SSB-201ENST00000260956 MYO3BQ8WXR4 1341 aa20.39■□□□□ 0.85
SSB-201ENST00000260956 CCDC196A0A1B0GTZ2 297 aa20.39■□□□□ 0.85
SSB-201ENST00000260956 A0A1B0GVL5 298 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms