RNA–Protein interactions for RNA: ENST00000257765.9

KHDC1-201, Transcript of KH domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KHDC1, Length 1,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1-201ENST00000257765 USP17L11C9JVI0 530 aa22.48■■□□□ 1.19
KHDC1-201ENST00000257765 USP17L18D6R9N7 530 aa22.48■■□□□ 1.19
KHDC1-201ENST00000257765 USP17L22D6RA61 530 aa22.48■■□□□ 1.19
KHDC1-201ENST00000257765 USP17L17D6RBQ6 530 aa22.48■■□□□ 1.19
KHDC1-201ENST00000257765 USP17L19D6RCP7 530 aa22.48■■□□□ 1.19
KHDC1-201ENST00000257765 USP17L20D6RJB6 530 aa22.48■■□□□ 1.19
KHDC1-201ENST00000257765 BMP8BP34820 402 aa22.48■■□□□ 1.19
KHDC1-201ENST00000257765 USP14P54578 494 aa22.48■■□□□ 1.19
KHDC1-201ENST00000257765 CACNB2Q08289 660 aaPredicted RBP22.48■■□□□ 1.19
KHDC1-201ENST00000257765 USP17L24Q0WX57 530 aa22.48■■□□□ 1.19
KHDC1-201ENST00000257765 RAB3GAP1Q15042 981 aa22.48■■□□□ 1.19
KHDC1-201ENST00000257765 POTEEQ6S8J3 1075 aa22.48■■□□□ 1.19
KHDC1-201ENST00000257765 AACSQ86V21 672 aa22.48■■□□□ 1.19
KHDC1-201ENST00000257765 ERC1Q8IUD2 1116 aa22.48■■□□□ 1.19
KHDC1-201ENST00000257765 LRCH3Q96II8 777 aa22.48■■□□□ 1.19
KHDC1-201ENST00000257765 RABGAP1Q9Y3P9 1069 aa22.48■■□□□ 1.19
KHDC1-201ENST00000257765 CCNA1P78396 465 aa22.47■■□□□ 1.19
KHDC1-201ENST00000257765 HNRNPUQ00839 825 aaKnown RBP eCLIP22.47■■□□□ 1.19
KHDC1-201ENST00000257765 CCL14Q16627 93 aa22.47■■□□□ 1.19
KHDC1-201ENST00000257765 ABCB5Q2M3G0 1257 aa22.47■■□□□ 1.19
KHDC1-201ENST00000257765 CERKLQ49MI3 558 aaPredicted RBP22.47■■□□□ 1.19
KHDC1-201ENST00000257765 KIAA1683Q9H0B3 1180 aa22.47■■□□□ 1.19
KHDC1-201ENST00000257765 EXOC6BQ9Y2D4 811 aa22.47■■□□□ 1.19
KHDC1-201ENST00000257765 PFASO15067 1338 aa22.47■■□□□ 1.19
KHDC1-201ENST00000257765 CNMDO75829 334 aa22.46■■□□□ 1.19
KHDC1-201ENST00000257765 SYN1P17600 705 aa22.46■■□□□ 1.19
KHDC1-201ENST00000257765 VCAM1P19320 739 aa22.46■■□□□ 1.19
KHDC1-201ENST00000257765 MAP2K5Q13163 448 aa22.46■■□□□ 1.19
KHDC1-201ENST00000257765 CABP5Q9NP86 173 aa22.46■■□□□ 1.19
KHDC1-201ENST00000257765 LAMA3Q16787 3333 aa22.46■■□□□ 1.19
KHDC1-201ENST00000257765 MYH8P13535 1937 aa22.45■■□□□ 1.18
KHDC1-201ENST00000257765 GLRX3O76003 335 aaKnown RBP22.45■■□□□ 1.18
KHDC1-201ENST00000257765 CCND3P30281 292 aaPredicted RBP22.45■■□□□ 1.18
KHDC1-201ENST00000257765 CATSPERGQ6ZRH7 1159 aa22.45■■□□□ 1.18
KHDC1-201ENST00000257765 RIOK1Q9BRS2 568 aaKnown RBP22.45■■□□□ 1.18
KHDC1-201ENST00000257765 SHMT1P34896 483 aa22.44■■□□□ 1.18
KHDC1-201ENST00000257765 WDR78Q5VTH9 848 aa22.44■■□□□ 1.18
KHDC1-201ENST00000257765 ACER1Q8TDN7 264 aa22.44■■□□□ 1.18
KHDC1-201ENST00000257765 MAGEB6P1A0A0J9YX57 407 aa22.43■■□□□ 1.18
KHDC1-201ENST00000257765 COL6A1P12109 1028 aa22.43■■□□□ 1.18
KHDC1-201ENST00000257765 MAGEA10P43363 369 aaPredicted RBP22.43■■□□□ 1.18
KHDC1-201ENST00000257765 PLCD1P51178 756 aa22.43■■□□□ 1.18
KHDC1-201ENST00000257765 TTF1Q15361 905 aaPredicted RBP22.43■■□□□ 1.18
KHDC1-201ENST00000257765 LHX8Q68G74 356 aa22.43■■□□□ 1.18
KHDC1-201ENST00000257765 LBX2Q6XYB7 198 aa22.43■■□□□ 1.18
KHDC1-201ENST00000257765 EDC3Q96F86 508 aaKnown RBP22.43■■□□□ 1.18
KHDC1-201ENST00000257765 SLC15A5A6NIM6 579 aa22.42■■□□□ 1.18
KHDC1-201ENST00000257765 POLR3DP05423 398 aaPredicted RBP22.42■■□□□ 1.18
KHDC1-201ENST00000257765 HSP90AB4PQ58FF6 505 aa22.42■■□□□ 1.18
KHDC1-201ENST00000257765 IL1RAPL2Q9NP60 686 aa22.42■■□□□ 1.18
KHDC1-201ENST00000257765 IVNS1ABPQ9Y6Y0 642 aa22.42■■□□□ 1.18
KHDC1-201ENST00000257765 ZNF236Q9UL36 1845 aa22.42■■□□□ 1.18
KHDC1-201ENST00000257765 A0A0G2JMZ2 1700 aa22.42■■□□□ 1.18
KHDC1-201ENST00000257765 SPDYE16A6NNV3 312 aaPredicted RBP22.41■■□□□ 1.18
KHDC1-201ENST00000257765 PTPREP23469 700 aa22.41■■□□□ 1.18
KHDC1-201ENST00000257765 GUCY1A2P33402 732 aa22.41■■□□□ 1.18
KHDC1-201ENST00000257765 MFSD14CQ5VZR4 134 aa22.41■■□□□ 1.18
KHDC1-201ENST00000257765 RHPN1Q8TCX5 695 aa22.41■■□□□ 1.18
KHDC1-201ENST00000257765 CRNKL1Q9BZJ0 848 aaKnown RBP22.41■■□□□ 1.18
KHDC1-201ENST00000257765 RPAP3Q9H6T3 665 aaPredicted RBP22.41■■□□□ 1.18
KHDC1-201ENST00000257765 BTBD7Q9P203 1132 aa22.41■■□□□ 1.18
KHDC1-201ENST00000257765 PDE6AP16499 860 aa22.4■■□□□ 1.18
KHDC1-201ENST00000257765 GABPAQ06546 454 aa22.4■■□□□ 1.18
KHDC1-201ENST00000257765 SEPT2Q15019 361 aa22.4■■□□□ 1.18
KHDC1-201ENST00000257765 GPR153Q6NV75 609 aa22.4■■□□□ 1.18
KHDC1-201ENST00000257765 TDHQ8IZJ6 230 aa22.4■■□□□ 1.18
KHDC1-201ENST00000257765 MCM9Q9NXL9 1143 aa22.4■■□□□ 1.18
KHDC1-201ENST00000257765 FLRT1Q9NZU1 646 aa22.4■■□□□ 1.18
KHDC1-201ENST00000257765 GRB14Q14449 540 aa22.39■■□□□ 1.17
KHDC1-201ENST00000257765 LRRC26Q2I0M4 334 aa22.39■■□□□ 1.17
KHDC1-201ENST00000257765 SLC9C2Q5TAH2 1124 aa22.39■■□□□ 1.17
KHDC1-201ENST00000257765 PANK1Q8TE04 598 aa22.39■■□□□ 1.17
KHDC1-201ENST00000257765 UBE2OQ9C0C9 1292 aaKnown RBP22.39■■□□□ 1.17
KHDC1-201ENST00000257765 RLFQ13129 1914 aa22.39■■□□□ 1.17
KHDC1-201ENST00000257765 MPHOSPH10O00566 681 aaKnown RBP22.38■■□□□ 1.17
KHDC1-201ENST00000257765 HOXC6P09630 235 aa22.38■■□□□ 1.17
KHDC1-201ENST00000257765 LRIT3Q3SXY7 679 aa22.38■■□□□ 1.17
KHDC1-201ENST00000257765 CLASRPQ8N2M8 674 aaKnown RBP22.38■■□□□ 1.17
KHDC1-201ENST00000257765 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.38■■□□□ 1.17
KHDC1-201ENST00000257765 ZNF532Q9HCE3 1301 aa22.37■■□□□ 1.17
KHDC1-201ENST00000257765 MSCO60682 206 aa22.37■■□□□ 1.17
KHDC1-201ENST00000257765 ATP2B2Q01814 1243 aa22.37■■□□□ 1.17
KHDC1-201ENST00000257765 EVX2Q03828 476 aa22.37■■□□□ 1.17
KHDC1-201ENST00000257765 SLC17A8Q8NDX2 589 aa22.37■■□□□ 1.17
KHDC1-201ENST00000257765 NPLOC4Q8TAT6 608 aa22.37■■□□□ 1.17
KHDC1-201ENST00000257765 KIF1BPQ96EK5 621 aa22.37■■□□□ 1.17
KHDC1-201ENST00000257765 DNAJC2Q99543 621 aaKnown RBP22.37■■□□□ 1.17
KHDC1-201ENST00000257765 DDX20Q9UHI6 824 aaKnown RBP22.37■■□□□ 1.17
KHDC1-201ENST00000257765 BAZ2AQ9UIF9 1905 aaKnown RBP22.37■■□□□ 1.17
KHDC1-201ENST00000257765 MYH7P12883 1935 aa22.36■■□□□ 1.17
KHDC1-201ENST00000257765 GOLIM4O00461 696 aa22.36■■□□□ 1.17
KHDC1-201ENST00000257765 CNGA1P29973 690 aa22.36■■□□□ 1.17
KHDC1-201ENST00000257765 SDR42E1Q8WUS8 393 aa22.36■■□□□ 1.17
KHDC1-201ENST00000257765 DCP1AQ9NPI6 582 aaPredicted RBP22.36■■□□□ 1.17
KHDC1-201ENST00000257765 PARP14Q460N5 1801 aa22.36■■□□□ 1.17
KHDC1-201ENST00000257765 A0A1W2PRG0 241 aa22.35■■□□□ 1.17
KHDC1-201ENST00000257765 APBB1O00213 710 aa22.35■■□□□ 1.17
KHDC1-201ENST00000257765 IFIT2P09913 472 aaKnown RBP22.35■■□□□ 1.17
KHDC1-201ENST00000257765 COG2Q14746 738 aa22.35■■□□□ 1.17
KHDC1-201ENST00000257765 LCORLQ8N3X6 602 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms