RNA–Protein interactions for RNA: ENST00000256552.10

TRPM1-201, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 5,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-201ENST00000256552 HOMER3Q9NSC5 361 aa11.34□□□□□ -0.59
TRPM1-201ENST00000256552 CC2D2AQ9P2K1 1620 aa11.33□□□□□ -0.59
TRPM1-201ENST00000256552 SOWAHDA6NJG2 315 aa11.33□□□□□ -0.6
TRPM1-201ENST00000256552 ALDH1L1O75891 902 aa11.33□□□□□ -0.6
TRPM1-201ENST00000256552 CASP14P31944 242 aa11.33□□□□□ -0.6
TRPM1-201ENST00000256552 PDCLQ13371 301 aa11.33□□□□□ -0.6
TRPM1-201ENST00000256552 NCAPH2Q6IBW4 605 aa11.33□□□□□ -0.6
TRPM1-201ENST00000256552 VPS52Q8N1B4 723 aa11.33□□□□□ -0.6
TRPM1-201ENST00000256552 KLHL14Q9P2G3 628 aa11.33□□□□□ -0.6
TRPM1-201ENST00000256552 SCOCQ9UIL1 159 aa11.33□□□□□ -0.6
TRPM1-201ENST00000256552 TXNDC9O14530 226 aa11.33□□□□□ -0.6
TRPM1-201ENST00000256552 IKBKBO14920 756 aa11.33□□□□□ -0.6
TRPM1-201ENST00000256552 SLC8A3P57103 927 aa11.33□□□□□ -0.6
TRPM1-201ENST00000256552 IRX4P78413 519 aa11.33□□□□□ -0.6
TRPM1-201ENST00000256552 TTF1Q15361 905 aaPredicted RBP11.33□□□□□ -0.6
TRPM1-201ENST00000256552 ZNF174Q15697 407 aa11.33□□□□□ -0.6
TRPM1-201ENST00000256552 MYLK4Q86YV6 388 aaPredicted RBP11.33□□□□□ -0.6
TRPM1-201ENST00000256552 VSTM4Q8IW00 320 aa11.33□□□□□ -0.6
TRPM1-201ENST00000256552 CDC5LQ99459 802 aaKnown RBP11.33□□□□□ -0.6
TRPM1-201ENST00000256552 ATP5J2-PTCD1G3V325 749 aa11.33□□□□□ -0.6
TRPM1-201ENST00000256552 PTCD1O75127 700 aaKnown RBP11.33□□□□□ -0.6
TRPM1-201ENST00000256552 AP1G2O75843 785 aa11.33□□□□□ -0.6
TRPM1-201ENST00000256552 CMA1P23946 247 aa11.33□□□□□ -0.6
TRPM1-201ENST00000256552 RAPGEF1Q13905 1077 aa11.33□□□□□ -0.6
TRPM1-201ENST00000256552 ADCK5Q3MIX3 580 aa11.33□□□□□ -0.6
TRPM1-201ENST00000256552 DENND2CQ68D51 928 aa11.33□□□□□ -0.6
TRPM1-201ENST00000256552 TYW1BQ6NUM6 668 aa11.33□□□□□ -0.6
TRPM1-201ENST00000256552 CSGALNACT2Q8N6G5 542 aa11.33□□□□□ -0.6
TRPM1-201ENST00000256552 ANKRD42Q8N9B4 389 aa11.33□□□□□ -0.6
TRPM1-201ENST00000256552 NELFBQ8WX92 580 aa11.33□□□□□ -0.6
TRPM1-201ENST00000256552 ZC4H2Q9NQZ6 224 aa11.33□□□□□ -0.6
TRPM1-201ENST00000256552 MYO1AQ9UBC5 1043 aa11.33□□□□□ -0.6
TRPM1-201ENST00000256552 MAGI1Q96QZ7 1491 aaPredicted RBP11.33□□□□□ -0.6
TRPM1-201ENST00000256552 ZNF76P36508 570 aa11.33□□□□□ -0.6
TRPM1-201ENST00000256552 GUCY2DQ02846 1103 aa11.33□□□□□ -0.6
TRPM1-201ENST00000256552 LSG1Q9H089 658 aaKnown RBP11.33□□□□□ -0.6
TRPM1-201ENST00000256552 THEGQ9P2T0 379 aa11.33□□□□□ -0.6
TRPM1-201ENST00000256552 SSX2IPQ9Y2D8 614 aa11.33□□□□□ -0.6
TRPM1-201ENST00000256552 EPN1Q9Y6I3 576 aaPredicted RBP11.33□□□□□ -0.6
TRPM1-201ENST00000256552 RASSF2P50749 326 aa11.32□□□□□ -0.6
TRPM1-201ENST00000256552 C2orf54Q08AI8 447 aa11.32□□□□□ -0.6
TRPM1-201ENST00000256552 GSTA5Q7RTV2 222 aa11.32□□□□□ -0.6
TRPM1-201ENST00000256552 SEPT10Q9P0V9 454 aa11.32□□□□□ -0.6
TRPM1-201ENST00000256552 TTC21BQ7Z4L5 1316 aa11.32□□□□□ -0.6
TRPM1-201ENST00000256552 OPHN1O60890 802 aa11.32□□□□□ -0.6
TRPM1-201ENST00000256552 CYP2E1P05181 493 aaPredicted RBP11.32□□□□□ -0.6
TRPM1-201ENST00000256552 GGCXP38435 758 aa11.32□□□□□ -0.6
TRPM1-201ENST00000256552 RBL2Q08999 1139 aa11.32□□□□□ -0.6
TRPM1-201ENST00000256552 IFIT5Q13325 482 aaKnown RBP11.32□□□□□ -0.6
TRPM1-201ENST00000256552 FAM133BQ5BKY9 247 aaKnown RBP11.32□□□□□ -0.6
TRPM1-201ENST00000256552 TMTC2Q8N394 836 aa11.32□□□□□ -0.6
TRPM1-201ENST00000256552 H2AFXP16104 143 aaPredicted RBP11.32□□□□□ -0.6
TRPM1-201ENST00000256552 PDE6BP35913 854 aa11.32□□□□□ -0.6
TRPM1-201ENST00000256552 DRP2Q13474 957 aa11.32□□□□□ -0.6
TRPM1-201ENST00000256552 CLIC4Q9Y696 253 aa11.32□□□□□ -0.6
TRPM1-201ENST00000256552 LARGE1O95461 756 aa11.31□□□□□ -0.6
TRPM1-201ENST00000256552 NR1D1P20393 614 aa11.31□□□□□ -0.6
TRPM1-201ENST00000256552 ICA1Q05084 483 aa11.31□□□□□ -0.6
TRPM1-201ENST00000256552 RPS6KA1Q15418 735 aa11.31□□□□□ -0.6
TRPM1-201ENST00000256552 KRT40Q6A162 431 aa11.31□□□□□ -0.6
TRPM1-201ENST00000256552 B4GALNT2Q8NHY0 566 aa11.31□□□□□ -0.6
TRPM1-201ENST00000256552 CNNM2Q9H8M5 875 aa11.31□□□□□ -0.6
TRPM1-201ENST00000256552 BCAP29Q9UHQ4 241 aa11.31□□□□□ -0.6
TRPM1-201ENST00000256552 TCP1P17987 556 aaKnown RBP11.31□□□□□ -0.6
TRPM1-201ENST00000256552 HAUS1Q96CS2 278 aa11.31□□□□□ -0.6
TRPM1-201ENST00000256552 KIAA0586Q9BVV6 1533 aa11.31□□□□□ -0.6
TRPM1-201ENST00000256552 A0A1W2PQ27 194 aa11.31□□□□□ -0.6
TRPM1-201ENST00000256552 A0A1W2PQ64 194 aa11.31□□□□□ -0.6
TRPM1-201ENST00000256552 A0A1W2PQD8 194 aa11.31□□□□□ -0.6
TRPM1-201ENST00000256552 NUTM2BA6NNL0 878 aaPredicted RBP11.31□□□□□ -0.6
TRPM1-201ENST00000256552 NUTM2EB1AL46 878 aaPredicted RBP11.31□□□□□ -0.6
TRPM1-201ENST00000256552 TADA3O75528 432 aa11.31□□□□□ -0.6
TRPM1-201ENST00000256552 TFCP2Q12800 502 aa11.31□□□□□ -0.6
TRPM1-201ENST00000256552 HSP90AA5PQ58FG0 334 aa11.31□□□□□ -0.6
TRPM1-201ENST00000256552 CCDC62Q6P9F0 684 aa11.31□□□□□ -0.6
TRPM1-201ENST00000256552 FTOQ9C0B1 505 aaKnown RBP eCLIP11.31□□□□□ -0.6
TRPM1-201ENST00000256552 MKNK2Q9HBH9 465 aa11.31□□□□□ -0.6
TRPM1-201ENST00000256552 SATB2Q9UPW6 733 aa11.31□□□□□ -0.6
TRPM1-201ENST00000256552 PHLDB3Q6NSJ2 640 aa11.31□□□□□ -0.6
TRPM1-201ENST00000256552 HELLSQ9NRZ9 838 aa11.31□□□□□ -0.6
TRPM1-201ENST00000256552 FAF1Q9UNN5 650 aaPredicted RBP11.31□□□□□ -0.6
TRPM1-201ENST00000256552 BIVM-ERCC5R4GMW8 1640 aa11.31□□□□□ -0.6
TRPM1-201ENST00000256552 TOPBP1Q92547 1522 aa11.31□□□□□ -0.6
TRPM1-201ENST00000256552 STX2P32856 288 aa11.31□□□□□ -0.6
TRPM1-201ENST00000256552 MYO1EQ12965 1108 aa11.31□□□□□ -0.6
TRPM1-201ENST00000256552 TOGARAM2Q6ZUX3 1019 aa11.31□□□□□ -0.6
TRPM1-201ENST00000256552 UNC5CLQ8IV45 518 aa11.31□□□□□ -0.6
TRPM1-201ENST00000256552 PDCD7Q8N8D1 485 aaKnown RBP11.31□□□□□ -0.6
TRPM1-201ENST00000256552 SPDYE1Q8NFV5 336 aaPredicted RBP11.31□□□□□ -0.6
TRPM1-201ENST00000256552 STAMQ92783 540 aa11.31□□□□□ -0.6
TRPM1-201ENST00000256552 CD248Q9HCU0 757 aa11.31□□□□□ -0.6
TRPM1-201ENST00000256552 KCNJ18B7U540 433 aa11.3□□□□□ -0.6
TRPM1-201ENST00000256552 PLCD1P51178 756 aa11.3□□□□□ -0.6
TRPM1-201ENST00000256552 COG7P83436 770 aa11.3□□□□□ -0.6
TRPM1-201ENST00000256552 KCNJ12Q14500 433 aa11.3□□□□□ -0.6
TRPM1-201ENST00000256552 MEFVO15553 781 aaPredicted RBP11.3□□□□□ -0.6
TRPM1-201ENST00000256552 ATP1A3P13637 1013 aa11.3□□□□□ -0.6
TRPM1-201ENST00000256552 CWF19L2Q2TBE0 894 aaKnown RBP11.3□□□□□ -0.6
TRPM1-201ENST00000256552 SLC9C1Q4G0N8 1177 aa11.3□□□□□ -0.6
TRPM1-201ENST00000256552 ALS2CLQ60I27 953 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms