RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 NOVP48745 357 aa10.57□□□□□ -0.72
RPA1-201ENST00000254719 MICU3Q86XE3 530 aa10.57□□□□□ -0.72
RPA1-201ENST00000254719 MRPS27Q92552 414 aaKnown RBP10.57□□□□□ -0.72
RPA1-201ENST00000254719 C16orf45Q96MC5 204 aaPredicted RBP10.57□□□□□ -0.72
RPA1-201ENST00000254719 UTP14AQ9BVJ6 771 aaKnown RBP10.57□□□□□ -0.72
RPA1-201ENST00000254719 MORC2Q9Y6X9 1032 aaPredicted RBP10.57□□□□□ -0.72
RPA1-201ENST00000254719 ISM2Q6H9L7 571 aa10.57□□□□□ -0.72
RPA1-201ENST00000254719 HOMER1Q86YM7 354 aa10.57□□□□□ -0.72
RPA1-201ENST00000254719 XPO4Q9C0E2 1151 aaKnown RBP10.57□□□□□ -0.72
RPA1-201ENST00000254719 NIP7Q9Y221 180 aaKnown RBP eCLIP10.57□□□□□ -0.72
RPA1-201ENST00000254719 LAMA2P24043 3122 aaKnown RBP10.57□□□□□ -0.72
RPA1-201ENST00000254719 KIF13BQ9NQT8 1826 aa10.56□□□□□ -0.72
RPA1-201ENST00000254719 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.56□□□□□ -0.72
RPA1-201ENST00000254719 GOLGA6L1Q8N7Z2 621 aa10.56□□□□□ -0.72
RPA1-201ENST00000254719 PSME4Q14997 1843 aa10.56□□□□□ -0.72
RPA1-201ENST00000254719 PRDM1O75626 825 aa10.56□□□□□ -0.72
RPA1-201ENST00000254719 DDB1Q16531 1140 aa10.56□□□□□ -0.72
RPA1-201ENST00000254719 CCDC70Q6NSX1 233 aa10.56□□□□□ -0.72
RPA1-201ENST00000254719 PROM2Q8N271 834 aa10.56□□□□□ -0.72
RPA1-201ENST00000254719 PDCL2Q8N4E4 241 aa10.56□□□□□ -0.72
RPA1-201ENST00000254719 ANO10Q9NW15 660 aa10.56□□□□□ -0.72
RPA1-201ENST00000254719 HTTP42858 3142 aa10.56□□□□□ -0.72
RPA1-201ENST00000254719 SLURP2P0DP57 97 aa10.56□□□□□ -0.72
RPA1-201ENST00000254719 MECOMQ03112 1051 aa10.56□□□□□ -0.72
RPA1-201ENST00000254719 C8orf76Q96K31 380 aa10.56□□□□□ -0.72
RPA1-201ENST00000254719 ALG1Q9BT22 464 aa10.56□□□□□ -0.72
RPA1-201ENST00000254719 ROBO3Q96MS0 1386 aa10.55□□□□□ -0.72
RPA1-201ENST00000254719 PTPREP23469 700 aa10.55□□□□□ -0.72
RPA1-201ENST00000254719 PPARAQ07869 468 aa10.55□□□□□ -0.72
RPA1-201ENST00000254719 TTF1Q15361 905 aaPredicted RBP10.55□□□□□ -0.72
RPA1-201ENST00000254719 TNS1Q9HBL0 1735 aaKnown RBP10.55□□□□□ -0.72
RPA1-201ENST00000254719 CUL4BQ13620 913 aa10.55□□□□□ -0.72
RPA1-201ENST00000254719 CEP135Q66GS9 1140 aa10.55□□□□□ -0.72
RPA1-201ENST00000254719 REXO1L1PQ8IX06 675 aa10.55□□□□□ -0.72
RPA1-201ENST00000254719 GPR101Q96P66 508 aaPredicted RBP10.55□□□□□ -0.72
RPA1-201ENST00000254719 CCDC196A0A1B0GTZ2 297 aa10.55□□□□□ -0.72
RPA1-201ENST00000254719 RASSF10A6NK89 507 aa10.55□□□□□ -0.72
RPA1-201ENST00000254719 METAP2P50579 478 aaKnown RBP eCLIP10.55□□□□□ -0.729e-6■■■■□ 23.9
RPA1-201ENST00000254719 NAALADL2Q58DX5 795 aa10.55□□□□□ -0.72
RPA1-201ENST00000254719 CLEC4GQ6UXB4 293 aa10.55□□□□□ -0.72
RPA1-201ENST00000254719 MPHOSPH8Q99549 860 aa10.55□□□□□ -0.72
RPA1-201ENST00000254719 PCDHA5Q9Y5H7 936 aa10.55□□□□□ -0.72
RPA1-201ENST00000254719 USP34Q70CQ2 3546 aa10.55□□□□□ -0.72
RPA1-201ENST00000254719 SLC5A1P13866 664 aa10.54□□□□□ -0.72
RPA1-201ENST00000254719 FILIP1LQ4L180 1135 aa10.54□□□□□ -0.72
RPA1-201ENST00000254719 BRAPQ7Z569 592 aa10.54□□□□□ -0.72
RPA1-201ENST00000254719 EPSTI1Q96J88 318 aa10.54□□□□□ -0.72
RPA1-201ENST00000254719 TMEM87BQ96K49 555 aa10.54□□□□□ -0.72
RPA1-201ENST00000254719 DCP1AQ9NPI6 582 aaPredicted RBP10.54□□□□□ -0.72
RPA1-201ENST00000254719 BIN1O00499 593 aa10.54□□□□□ -0.72
RPA1-201ENST00000254719 ONECUT3O60422 494 aaPredicted RBP10.54□□□□□ -0.72
RPA1-201ENST00000254719 NOSTRINQ8IVI9 506 aa10.54□□□□□ -0.72
RPA1-201ENST00000254719 SLX4Q8IY92 1834 aa10.54□□□□□ -0.72
RPA1-201ENST00000254719 CCDC69A6NI79 296 aa10.54□□□□□ -0.72
RPA1-201ENST00000254719 TXLNAP40222 546 aa10.54□□□□□ -0.72
RPA1-201ENST00000254719 MORC3Q14149 939 aa10.54□□□□□ -0.72
RPA1-201ENST00000254719 FAM98CQ17RN3 349 aaKnown RBP10.54□□□□□ -0.72
RPA1-201ENST00000254719 CEP131Q9UPN4 1083 aa10.54□□□□□ -0.72
RPA1-201ENST00000254719 TNKSO95271 1327 aa10.54□□□□□ -0.72
RPA1-201ENST00000254719 XDHP47989 1333 aa10.54□□□□□ -0.72
RPA1-201ENST00000254719 MARCH6O60337 910 aa10.54□□□□□ -0.72
RPA1-201ENST00000254719 IRF2BP1Q8IU81 584 aa10.54□□□□□ -0.72
RPA1-201ENST00000254719 FANCBQ8NB91 859 aa10.54□□□□□ -0.72
RPA1-201ENST00000254719 TIGD1Q96MW7 591 aa10.54□□□□□ -0.72
RPA1-201ENST00000254719 NLRP12P59046 1061 aa10.53□□□□□ -0.72
RPA1-201ENST00000254719 STX1AQ16623 288 aa10.53□□□□□ -0.72
RPA1-201ENST00000254719 ZNF827Q17R98 1081 aa10.53□□□□□ -0.72
RPA1-201ENST00000254719 ELOA2Q8IYF1 753 aaPredicted RBP10.53□□□□□ -0.72
RPA1-201ENST00000254719 MNS1Q8NEH6 495 aa10.53□□□□□ -0.72
RPA1-201ENST00000254719 ARHGEF1Q92888 912 aaKnown RBP10.53□□□□□ -0.72
RPA1-201ENST00000254719 CLIP2Q9UDT6 1046 aa10.53□□□□□ -0.72
RPA1-201ENST00000254719 COL4A5P29400 1685 aa10.53□□□□□ -0.72
RPA1-201ENST00000254719 G3V3G9 751 aa10.53□□□□□ -0.72
RPA1-201ENST00000254719 DCAF8Q5TAQ9 597 aa10.53□□□□□ -0.72
RPA1-201ENST00000254719 TMEM51Q9NW97 253 aa10.53□□□□□ -0.72
RPA1-201ENST00000254719 PDS5AQ29RF7 1337 aaKnown RBP10.53□□□□□ -0.72
RPA1-201ENST00000254719 TEX35Q5T0J7 233 aa10.53□□□□□ -0.72
RPA1-201ENST00000254719 ZNF654Q8IZM8 581 aa10.53□□□□□ -0.72
RPA1-201ENST00000254719 CCAR2Q8N163 923 aaKnown RBP10.53□□□□□ -0.72
RPA1-201ENST00000254719 MAN1B1Q9UKM7 699 aa10.53□□□□□ -0.72
RPA1-201ENST00000254719 SLC4A4Q9Y6R1 1079 aa10.53□□□□□ -0.72
RPA1-201ENST00000254719 PLCD1P51178 756 aa10.52□□□□□ -0.72
RPA1-201ENST00000254719 PDXDC2PQ6P474 469 aa10.52□□□□□ -0.72
RPA1-201ENST00000254719 STAG2Q8N3U4 1231 aa10.52□□□□□ -0.72
RPA1-201ENST00000254719 KRBA2Q6ZNG9 492 aa10.52□□□□□ -0.73
RPA1-201ENST00000254719 CSRNP2Q9H175 543 aa10.52□□□□□ -0.73
RPA1-201ENST00000254719 PPP1R3GB7ZBB8 358 aa10.52□□□□□ -0.73
RPA1-201ENST00000254719 ZBTB43O43298 467 aa10.52□□□□□ -0.73
RPA1-201ENST00000254719 UQCRFS1P1P0C7P4 283 aa10.52□□□□□ -0.73
RPA1-201ENST00000254719 TC2NQ8N9U0 490 aa10.52□□□□□ -0.73
RPA1-201ENST00000254719 SMARCE1Q969G3 411 aa10.52□□□□□ -0.73
RPA1-201ENST00000254719 ACBD3Q9H3P7 528 aa10.52□□□□□ -0.73
RPA1-201ENST00000254719 RNF41Q9H4P4 317 aaPredicted RBP10.52□□□□□ -0.73
RPA1-201ENST00000254719 ZNF652Q9Y2D9 606 aa10.52□□□□□ -0.73
RPA1-201ENST00000254719 IGHMBP2P38935 993 aaKnown RBP10.52□□□□□ -0.73
RPA1-201ENST00000254719 VPS72Q15906 364 aa10.52□□□□□ -0.73
RPA1-201ENST00000254719 CRY2Q49AN0 593 aa10.52□□□□□ -0.73
RPA1-201ENST00000254719 PAXIP1Q6ZW49 1069 aaPredicted RBP10.52□□□□□ -0.73
RPA1-201ENST00000254719 KCNG4Q8TDN1 519 aa10.52□□□□□ -0.73
RPA1-201ENST00000254719 L2HGDHQ9H9P8 463 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms