RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 ATP8A2Q9NTI2 1148 aa8.21□□□□□ -1.09
MED28-201ENST00000237380 SYCE3A1L190 88 aa8.21□□□□□ -1.09
MED28-201ENST00000237380 SPOPO43791 374 aa8.21□□□□□ -1.09
MED28-201ENST00000237380 SDCCAG8Q86SQ7 713 aaPredicted RBP8.21□□□□□ -1.09
MED28-201ENST00000237380 CCDC124Q96CT7 223 aaKnown RBP8.21□□□□□ -1.09
MED28-201ENST00000237380 C16orf45Q96MC5 204 aaPredicted RBP8.21□□□□□ -1.09
MED28-201ENST00000237380 KCNH4Q9UQ05 1017 aa8.21□□□□□ -1.09
MED28-201ENST00000237380 BCS1LQ9Y276 419 aa8.21□□□□□ -1.09
MED28-201ENST00000237380 DCAF17Q5H9S7 520 aaPredicted RBP8.21□□□□□ -1.09
MED28-201ENST00000237380 BBOF1Q8ND07 529 aa8.21□□□□□ -1.09
MED28-201ENST00000237380 THRAP3Q9Y2W1 955 aaKnown RBP8.21□□□□□ -1.09
MED28-201ENST00000237380 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.21□□□□□ -1.1
MED28-201ENST00000237380 WDR64B1ANS9 1081 aa8.21□□□□□ -1.1
MED28-201ENST00000237380 FLOT1O75955 427 aa8.21□□□□□ -1.1
MED28-201ENST00000237380 GARSP41250 739 aaKnown RBP8.21□□□□□ -1.1
MED28-201ENST00000237380 SMC5Q8IY18 1101 aa8.21□□□□□ -1.1
MED28-201ENST00000237380 ANKRD35Q8N283 1001 aa8.21□□□□□ -1.1
MED28-201ENST00000237380 RHPN1Q8TCX5 695 aa8.21□□□□□ -1.1
MED28-201ENST00000237380 PPANQ9NQ55 473 aaKnown RBP8.21□□□□□ -1.1
MED28-201ENST00000237380 CHPF2Q9P2E5 772 aa8.21□□□□□ -1.1
MED28-201ENST00000237380 SEMA3EO15041 775 aa8.21□□□□□ -1.1
MED28-201ENST00000237380 ANXA13P27216 316 aa8.21□□□□□ -1.1
MED28-201ENST00000237380 CHRNA2Q15822 529 aa8.21□□□□□ -1.1
MED28-201ENST00000237380 CACNA2D3Q8IZS8 1091 aa8.21□□□□□ -1.1
MED28-201ENST00000237380 PROCA1Q8NCQ7 364 aaPredicted RBP8.21□□□□□ -1.1
MED28-201ENST00000237380 CCDC17Q96LX7 622 aa8.21□□□□□ -1.1
MED28-201ENST00000237380 TRIM62Q9BVG3 475 aa8.21□□□□□ -1.1
MED28-201ENST00000237380 CALCRLQ16602 461 aa8.21□□□□□ -1.1
MED28-201ENST00000237380 PHLDB2Q86SQ0 1253 aa8.21□□□□□ -1.1
MED28-201ENST00000237380 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.21□□□□□ -1.1
MED28-201ENST00000237380 BSDC1Q9NW68 430 aaPredicted RBP8.21□□□□□ -1.1
MED28-201ENST00000237380 SPDYE16A6NNV3 312 aaPredicted RBP8.21□□□□□ -1.1
MED28-201ENST00000237380 STK25O00506 426 aa8.21□□□□□ -1.1
MED28-201ENST00000237380 SPDYE2Q495Y8 402 aa8.21□□□□□ -1.1
MED28-201ENST00000237380 CCDC84Q86UT8 332 aaPredicted RBP8.21□□□□□ -1.1
MED28-201ENST00000237380 ARFGAP3Q9NP61 516 aa8.21□□□□□ -1.1
MED28-201ENST00000237380 GUCY1B3Q02153 619 aa8.21□□□□□ -1.1
MED28-201ENST00000237380 RNASELQ05823 741 aaKnown RBP8.21□□□□□ -1.1
MED28-201ENST00000237380 COA7Q96BR5 231 aa8.21□□□□□ -1.1
MED28-201ENST00000237380 FARP1Q9Y4F1 1045 aaPredicted RBP8.21□□□□□ -1.1
MED28-201ENST00000237380 MYO3BQ8WXR4 1341 aa8.21□□□□□ -1.1
MED28-201ENST00000237380 UBXN1Q04323 297 aa8.2□□□□□ -1.1
MED28-201ENST00000237380 DRP2Q13474 957 aa8.2□□□□□ -1.1
MED28-201ENST00000237380 LUC7L2Q9Y383 392 aaKnown RBP8.2□□□□□ -1.1
MED28-201ENST00000237380 ELP1O95163 1332 aa8.2□□□□□ -1.1
MED28-201ENST00000237380 ZNF165P49910 485 aa8.2□□□□□ -1.1
MED28-201ENST00000237380 ARHGAP4P98171 946 aa8.2□□□□□ -1.1
MED28-201ENST00000237380 KRT33BQ14525 404 aa8.2□□□□□ -1.1
MED28-201ENST00000237380 TRIM11Q96F44 468 aa8.2□□□□□ -1.1
MED28-201ENST00000237380 MIS18AQ9NYP9 233 aa8.2□□□□□ -1.1
MED28-201ENST00000237380 BPIFB4P59827 614 aa8.2□□□□□ -1.1
MED28-201ENST00000237380 RAB44Q7Z6P3 723 aaPredicted RBP8.2□□□□□ -1.1
MED28-201ENST00000237380 METTL13Q8N6R0 699 aa8.2□□□□□ -1.1
MED28-201ENST00000237380 IRAK4Q9NWZ3 460 aa8.2□□□□□ -1.1
MED28-201ENST00000237380 M0R2C6 588 aa8.2□□□□□ -1.1
MED28-201ENST00000237380 EFCAB14O75071 495 aa8.2□□□□□ -1.1
MED28-201ENST00000237380 PPFIA4O75335 1185 aa8.2□□□□□ -1.1
MED28-201ENST00000237380 MCM7P33993 719 aa8.2□□□□□ -1.1
MED28-201ENST00000237380 AK9Q5TCS8 1911 aa8.2□□□□□ -1.1
MED28-201ENST00000237380 SLC9C1Q4G0N8 1177 aa8.2□□□□□ -1.1
MED28-201ENST00000237380 DHX32Q7L7V1 743 aaKnown RBP8.2□□□□□ -1.1
MED28-201ENST00000237380 TYW1Q9NV66 732 aaKnown RBP8.2□□□□□ -1.1
MED28-201ENST00000237380 DNMT1P26358 1616 aaKnown RBP8.2□□□□□ -1.1
MED28-201ENST00000237380 GCP02774 474 aa8.2□□□□□ -1.1
MED28-201ENST00000237380 CA4P22748 312 aa8.2□□□□□ -1.1
MED28-201ENST00000237380 LMNB2Q03252 620 aa8.2□□□□□ -1.1
MED28-201ENST00000237380 ASIC2Q16515 512 aa8.2□□□□□ -1.1
MED28-201ENST00000237380 CCDC62Q6P9F0 684 aa8.2□□□□□ -1.1
MED28-201ENST00000237380 PATL1Q86TB9 770 aaKnown RBP8.2□□□□□ -1.1
MED28-201ENST00000237380 MAST1Q9Y2H9 1570 aa8.2□□□□□ -1.1
MED28-201ENST00000237380 KDM5CP41229 1560 aa8.2□□□□□ -1.1
MED28-201ENST00000237380 DNA2P51530 1060 aa8.2□□□□□ -1.1
MED28-201ENST00000237380 KRT81Q14533 505 aa8.2□□□□□ -1.1
MED28-201ENST00000237380 SDCCAG3Q96C92 435 aa8.2□□□□□ -1.1
MED28-201ENST00000237380 TEX12Q9BXU0 123 aa8.2□□□□□ -1.1
MED28-201ENST00000237380 FOSP01100 380 aaPredicted RBP8.2□□□□□ -1.1
MED28-201ENST00000237380 NNMTP40261 264 aa8.2□□□□□ -1.1
MED28-201ENST00000237380 CCDC15Q0P6D6 951 aa8.2□□□□□ -1.1
MED28-201ENST00000237380 HYOU1Q9Y4L1 999 aa8.2□□□□□ -1.1
MED28-201ENST00000237380 ABCA5Q8WWZ7 1642 aa8.19□□□□□ -1.1
MED28-201ENST00000237380 TMEM247A6NEH6 219 aa8.19□□□□□ -1.1
MED28-201ENST00000237380 TMEM110-MUSTN1A8MSY1 372 aa8.19□□□□□ -1.1
MED28-201ENST00000237380 CDR2Q01850 454 aa8.19□□□□□ -1.1
MED28-201ENST00000237380 ZBED2Q9BTP6 218 aa8.19□□□□□ -1.1
MED28-201ENST00000237380 TMEM106CQ9BVX2 250 aa8.19□□□□□ -1.1
MED28-201ENST00000237380 KIF28PB7ZC32 967 aa8.19□□□□□ -1.1
MED28-201ENST00000237380 SPTLC2O15270 562 aa8.19□□□□□ -1.1
MED28-201ENST00000237380 GAS7O60861 476 aa8.19□□□□□ -1.1
MED28-201ENST00000237380 C16orf72Q14CZ0 275 aa8.19□□□□□ -1.1
MED28-201ENST00000237380 MIS18BP1Q6P0N0 1132 aa8.19□□□□□ -1.1
MED28-201ENST00000237380 INO80BQ9C086 356 aaPredicted RBP8.19□□□□□ -1.1
MED28-201ENST00000237380 OLFML3Q9NRN5 406 aa8.19□□□□□ -1.1
MED28-201ENST00000237380 FAN1Q9Y2M0 1017 aa8.19□□□□□ -1.1
MED28-201ENST00000237380 SBNO1A3KN83 1393 aa8.19□□□□□ -1.1
MED28-201ENST00000237380 POLR2MP0CAP2 368 aa8.19□□□□□ -1.1
MED28-201ENST00000237380 BZW1Q7L1Q6 419 aaKnown RBP8.19□□□□□ -1.1
MED28-201ENST00000237380 MAP7D3Q8IWC1 876 aa8.19□□□□□ -1.1
MED28-201ENST00000237380 ANKRD36BP1Q96IX9 119 aa8.19□□□□□ -1.1
MED28-201ENST00000237380 ZFP91Q96JP5 570 aaPredicted RBP8.19□□□□□ -1.1
MED28-201ENST00000237380 ATP11AP98196 1134 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms