RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 MGAMO43451 1857 aa16.44■□□□□ 0.22
VEGFA-201ENST00000230480 MINDY4BA8MYZ0 360 aa16.43■□□□□ 0.22
VEGFA-201ENST00000230480 FKTNO75072 461 aa16.43■□□□□ 0.22
VEGFA-201ENST00000230480 OTUD7BQ6GQQ9 843 aa16.43■□□□□ 0.22
VEGFA-201ENST00000230480 GADL1Q6ZQY3 521 aa16.43■□□□□ 0.22
VEGFA-201ENST00000230480 CENPQQ7L2Z9 268 aaPredicted RBP16.43■□□□□ 0.22
VEGFA-201ENST00000230480 FASTKD5Q7L8L6 764 aaKnown RBP16.43■□□□□ 0.22
VEGFA-201ENST00000230480 C12orf42Q96LP6 360 aa16.43■□□□□ 0.22
VEGFA-201ENST00000230480 TBC1D2Q9BYX2 928 aa16.43■□□□□ 0.22
VEGFA-201ENST00000230480 MCOLN1Q9GZU1 580 aa16.43■□□□□ 0.22
VEGFA-201ENST00000230480 CPA4Q9UI42 421 aa16.43■□□□□ 0.22
VEGFA-201ENST00000230480 TAOK2Q9UL54 1235 aa16.43■□□□□ 0.22
VEGFA-201ENST00000230480 SLC45A1Q9Y2W3 748 aa16.43■□□□□ 0.22
VEGFA-201ENST00000230480 USP17L10C9JJH3 530 aa16.42■□□□□ 0.22
VEGFA-201ENST00000230480 PRDM1O75626 825 aa16.42■□□□□ 0.22
VEGFA-201ENST00000230480 CHMLP26374 656 aa16.42■□□□□ 0.22
VEGFA-201ENST00000230480 HOXA7P31268 230 aaPredicted RBP16.42■□□□□ 0.22
VEGFA-201ENST00000230480 CTDSPL2Q05D32 466 aa16.42■□□□□ 0.22
VEGFA-201ENST00000230480 PPARAQ07869 468 aa16.42■□□□□ 0.22
VEGFA-201ENST00000230480 LRRFIP1Q32MZ4 808 aaKnown RBP16.42■□□□□ 0.22
VEGFA-201ENST00000230480 CWC27Q6UX04 472 aaKnown RBP16.42■□□□□ 0.22
VEGFA-201ENST00000230480 CD99L2Q8TCZ2 262 aa16.42■□□□□ 0.22
VEGFA-201ENST00000230480 KIAA1683Q9H0B3 1180 aa16.42■□□□□ 0.22
VEGFA-201ENST00000230480 ZFYVE28Q9HCC9 887 aa16.42■□□□□ 0.22
VEGFA-201ENST00000230480 ANAPC4Q9UJX5 808 aa16.42■□□□□ 0.22
VEGFA-201ENST00000230480 CCDC171Q6TFL3 1326 aa16.42■□□□□ 0.22
VEGFA-201ENST00000230480 C19orf81C9J6K1 198 aa16.41■□□□□ 0.22
VEGFA-201ENST00000230480 SP3Q02447 781 aa16.41■□□□□ 0.22
VEGFA-201ENST00000230480 RAB3GAP1Q15042 981 aa16.41■□□□□ 0.22
VEGFA-201ENST00000230480 P2RX7Q99572 595 aaKnown RBP16.41■□□□□ 0.22
VEGFA-201ENST00000230480 TRIM34Q9BYJ4 488 aa16.41■□□□□ 0.22
VEGFA-201ENST00000230480 ASCC2Q9H1I8 757 aaPredicted RBP16.41■□□□□ 0.22
VEGFA-201ENST00000230480 APPP05067 770 aa16.4■□□□□ 0.22
VEGFA-201ENST00000230480 TDO2P48775 406 aa16.4■□□□□ 0.22
VEGFA-201ENST00000230480 TMEM179Q6ZVK1 233 aa16.4■□□□□ 0.22
VEGFA-201ENST00000230480 OTOP1Q7RTM1 612 aa16.4■□□□□ 0.22
VEGFA-201ENST00000230480 CTU1Q7Z7A3 348 aaKnown RBP16.4■□□□□ 0.22
VEGFA-201ENST00000230480 CCDC17Q96LX7 622 aa16.4■□□□□ 0.22
VEGFA-201ENST00000230480 AS3MTQ9HBK9 375 aa16.4■□□□□ 0.22
VEGFA-201ENST00000230480 TXNRD2Q9NNW7 524 aa16.4■□□□□ 0.22
VEGFA-201ENST00000230480 MYH4Q9Y623 1939 aa16.4■□□□□ 0.22
VEGFA-201ENST00000230480 PLXNB2O15031 1838 aa16.4■□□□□ 0.22
VEGFA-201ENST00000230480 NAPBQ9H115 298 aa16.39■□□□□ 0.21
VEGFA-201ENST00000230480 IL17RBQ9NRM6 502 aa16.39■□□□□ 0.21
VEGFA-201ENST00000230480 RBPJLQ9UBG7 517 aa16.39■□□□□ 0.21
VEGFA-201ENST00000230480 TMX2Q9Y320 296 aa16.39■□□□□ 0.21
VEGFA-201ENST00000230480 LAMA4Q16363 1823 aa16.39■□□□□ 0.21
VEGFA-201ENST00000230480 CNMDO75829 334 aa16.38■□□□□ 0.21
VEGFA-201ENST00000230480 EEF2P13639 858 aaKnown RBP16.38■□□□□ 0.21
VEGFA-201ENST00000230480 NOVP48745 357 aa16.38■□□□□ 0.21
VEGFA-201ENST00000230480 LACTBP83111 547 aaPredicted RBP16.38■□□□□ 0.21
VEGFA-201ENST00000230480 PTH1RQ03431 593 aa16.38■□□□□ 0.21
VEGFA-201ENST00000230480 ZYXQ15942 572 aaKnown RBP16.38■□□□□ 0.21
VEGFA-201ENST00000230480 Q3C1V9 767 aa16.38■□□□□ 0.21
VEGFA-201ENST00000230480 USP17L2Q6R6M4 530 aa16.38■□□□□ 0.21
VEGFA-201ENST00000230480 TBC1D10CQ8IV04 446 aa16.38■□□□□ 0.21
VEGFA-201ENST00000230480 ABHD8Q96I13 439 aa16.38■□□□□ 0.21
VEGFA-201ENST00000230480 CABP5Q9NP86 173 aa16.38■□□□□ 0.21
VEGFA-201ENST00000230480 ZMYM6O95789 1325 aa16.38■□□□□ 0.21
VEGFA-201ENST00000230480 KIAA0100Q14667 2235 aaKnown RBP16.37■□□□□ 0.21
VEGFA-201ENST00000230480 MPHOSPH10O00566 681 aaKnown RBP16.37■□□□□ 0.21
VEGFA-201ENST00000230480 VCAM1P19320 739 aa16.37■□□□□ 0.21
VEGFA-201ENST00000230480 FAM47AQ5JRC9 791 aa16.37■□□□□ 0.21
VEGFA-201ENST00000230480 CATSPERGQ6ZRH7 1159 aa16.37■□□□□ 0.21
VEGFA-201ENST00000230480 NEDD1Q8NHV4 660 aa16.37■□□□□ 0.21
VEGFA-201ENST00000230480 TRIM47Q96LD4 638 aa16.37■□□□□ 0.21
VEGFA-201ENST00000230480 TAF6LQ9Y6J9 622 aa16.37■□□□□ 0.21
VEGFA-201ENST00000230480 PLIN4Q96Q06 1357 aa16.37■□□□□ 0.21
VEGFA-201ENST00000230480 ORC4O43929 436 aa16.36■□□□□ 0.21
VEGFA-201ENST00000230480 NMT2O60551 498 aa16.36■□□□□ 0.21
VEGFA-201ENST00000230480 HAND2P61296 217 aa16.36■□□□□ 0.21
VEGFA-201ENST00000230480 MKL1Q969V6 931 aa16.36■□□□□ 0.21
VEGFA-201ENST00000230480 DDRGK1Q96HY6 314 aa16.36■□□□□ 0.21
VEGFA-201ENST00000230480 PARK7Q99497 189 aaKnown RBP16.36■□□□□ 0.21
VEGFA-201ENST00000230480 NACAP1Q9BZK3 213 aa16.36■□□□□ 0.21
VEGFA-201ENST00000230480 SMCHD1A6NHR9 2005 aa16.35■□□□□ 0.21
VEGFA-201ENST00000230480 SGSM2O43147 1006 aa16.35■□□□□ 0.21
VEGFA-201ENST00000230480 ICA1Q05084 483 aa16.35■□□□□ 0.21
VEGFA-201ENST00000230480 COL9A3Q14050 684 aaPredicted RBP16.35■□□□□ 0.21
VEGFA-201ENST00000230480 ANKRD13CQ8N6S4 541 aa16.35■□□□□ 0.21
VEGFA-201ENST00000230480 CEP95Q96GE4 821 aa16.35■□□□□ 0.21
VEGFA-201ENST00000230480 CCDC136Q96JN2 1154 aa16.35■□□□□ 0.21
VEGFA-201ENST00000230480 DSCC1Q9BVC3 393 aa16.35■□□□□ 0.21
VEGFA-201ENST00000230480 KANSL2Q9H9L4 492 aa16.35■□□□□ 0.21
VEGFA-201ENST00000230480 DIAPH3Q9NSV4 1193 aa16.35■□□□□ 0.21
VEGFA-201ENST00000230480 MTMR4Q9NYA4 1195 aa16.35■□□□□ 0.21
VEGFA-201ENST00000230480 NYAP2Q9P242 653 aa16.35■□□□□ 0.21
VEGFA-201ENST00000230480 MORF4L1Q9UBU8 362 aa16.35■□□□□ 0.21
VEGFA-201ENST00000230480 A0A0G2JMZ2 1700 aa16.35■□□□□ 0.21
VEGFA-201ENST00000230480 COL11A1P12107 1806 aaPredicted RBP16.34■□□□□ 0.21
VEGFA-201ENST00000230480 ECM2O94769 699 aaPredicted RBP16.34■□□□□ 0.21
VEGFA-201ENST00000230480 HERVK_113P62684 666 aa16.34■□□□□ 0.21
VEGFA-201ENST00000230480 TFAP4Q01664 338 aa16.34■□□□□ 0.21
VEGFA-201ENST00000230480 ERO1AQ96HE7 468 aa16.34■□□□□ 0.21
VEGFA-201ENST00000230480 VCPKMTQ9H867 229 aa16.34■□□□□ 0.21
VEGFA-201ENST00000230480 MKNK2Q9HBH9 465 aa16.34■□□□□ 0.21
VEGFA-201ENST00000230480 TMOD4Q9NZQ9 345 aa16.34■□□□□ 0.21
VEGFA-201ENST00000230480 PTPN22Q9Y2R2 807 aa16.34■□□□□ 0.21
VEGFA-201ENST00000230480 TRIM17Q9Y577 477 aa16.34■□□□□ 0.21
VEGFA-201ENST00000230480 CENPFP49454 3210 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms