RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 NBPF15Q8N660 670 aa13□□□□□ -0.33
CCND1-201ENST00000227507 CEP112Q8N8E3 955 aa13□□□□□ -0.33
CCND1-201ENST00000227507 TBC1D22AQ8WUA7 517 aa13□□□□□ -0.33
CCND1-201ENST00000227507 ESR2Q92731 530 aa13□□□□□ -0.33
CCND1-201ENST00000227507 PCMTD1Q96MG8 357 aaPredicted RBP13□□□□□ -0.33
CCND1-201ENST00000227507 KRT23Q9C075 422 aa13□□□□□ -0.33
CCND1-201ENST00000227507 RTEL1Q9NZ71 1219 aa13□□□□□ -0.33
CCND1-201ENST00000227507 GUCA1BQ9UMX6 200 aa13□□□□□ -0.33
CCND1-201ENST00000227507 CEMIPQ8WUJ3 1361 aa13□□□□□ -0.33
CCND1-201ENST00000227507 ATP8B1O43520 1251 aa13□□□□□ -0.33
CCND1-201ENST00000227507 PRC1O43663 620 aa13□□□□□ -0.33
CCND1-201ENST00000227507 BBOX1O75936 387 aa13□□□□□ -0.33
CCND1-201ENST00000227507 SPECC1LQ69YQ0 1117 aa13□□□□□ -0.33
CCND1-201ENST00000227507 REXO1L1PQ8IX06 675 aa13□□□□□ -0.33
CCND1-201ENST00000227507 NIM1KQ8IY84 436 aa13□□□□□ -0.33
CCND1-201ENST00000227507 KBTBD3Q8NAB2 608 aa13□□□□□ -0.33
CCND1-201ENST00000227507 PPM1EQ8WY54 764 aa13□□□□□ -0.33
CCND1-201ENST00000227507 CNNM2Q9H8M5 875 aa13□□□□□ -0.33
CCND1-201ENST00000227507 GJA3Q9Y6H8 435 aa13□□□□□ -0.33
CCND1-201ENST00000227507 H7C1W4 665 aa13□□□□□ -0.33
CCND1-201ENST00000227507 PDE8BO95263 885 aa13□□□□□ -0.33
CCND1-201ENST00000227507 ADD1P35611 737 aaKnown RBP13□□□□□ -0.33
CCND1-201ENST00000227507 BRD3Q15059 726 aa13□□□□□ -0.33
CCND1-201ENST00000227507 MUM1L1Q5H9M0 696 aa13□□□□□ -0.33
CCND1-201ENST00000227507 TTC19Q6DKK2 380 aaPredicted RBP13□□□□□ -0.33
CCND1-201ENST00000227507 FBXO41Q8TF61 875 aa13□□□□□ -0.33
CCND1-201ENST00000227507 PHKBQ93100 1093 aa13□□□□□ -0.33
CCND1-201ENST00000227507 FAM212AQ96EL1 285 aa13□□□□□ -0.33
CCND1-201ENST00000227507 IL17RAQ96F46 866 aa13□□□□□ -0.33
CCND1-201ENST00000227507 NUP88Q99567 741 aaPredicted RBP13□□□□□ -0.33
CCND1-201ENST00000227507 MCM9Q9NXL9 1143 aa13□□□□□ -0.33
CCND1-201ENST00000227507 ATF5Q9Y2D1 282 aaPredicted RBP13□□□□□ -0.33
CCND1-201ENST00000227507 MEGF6O75095 1541 aa13□□□□□ -0.33
CCND1-201ENST00000227507 ADCY9O60503 1353 aa13□□□□□ -0.33
CCND1-201ENST00000227507 IGKV5-2P06315 115 aa12.99□□□□□ -0.33
CCND1-201ENST00000227507 ATP5JP18859 108 aa12.99□□□□□ -0.33
CCND1-201ENST00000227507 MATR3P43243 847 aaKnown RBP eCLIP12.99□□□□□ -0.33
CCND1-201ENST00000227507 VSTM4Q8IW00 320 aa12.99□□□□□ -0.33
CCND1-201ENST00000227507 RUFY1Q96T51 708 aa12.99□□□□□ -0.33
CCND1-201ENST00000227507 STX8Q9UNK0 236 aa12.99□□□□□ -0.33
CCND1-201ENST00000227507 CTDNEP1O95476 244 aa12.99□□□□□ -0.33
CCND1-201ENST00000227507 CT47A1Q5JQC4 288 aaPredicted RBP12.99□□□□□ -0.33
CCND1-201ENST00000227507 RC3H1Q5TC82 1133 aaKnown RBP12.99□□□□□ -0.33
CCND1-201ENST00000227507 ATL3Q6DD88 541 aa12.99□□□□□ -0.33
CCND1-201ENST00000227507 SPATA5Q8NB90 893 aa12.99□□□□□ -0.33
CCND1-201ENST00000227507 SEC63Q9UGP8 760 aaKnown RBP12.99□□□□□ -0.33
CCND1-201ENST00000227507 CEP83Q9Y592 693 aa12.99□□□□□ -0.33
CCND1-201ENST00000227507 MBD4O95243 580 aa12.99□□□□□ -0.33
CCND1-201ENST00000227507 GUCY2CP25092 1073 aa12.99□□□□□ -0.33
CCND1-201ENST00000227507 UBE4AQ14139 1066 aa12.99□□□□□ -0.33
CCND1-201ENST00000227507 IGSF22Q8N9C0 903 aa12.99□□□□□ -0.33
CCND1-201ENST00000227507 CCDC148Q8NFR7 591 aa12.99□□□□□ -0.33
CCND1-201ENST00000227507 APPBP2Q92624 585 aa12.99□□□□□ -0.33
CCND1-201ENST00000227507 HELLSQ9NRZ9 838 aa12.99□□□□□ -0.33
CCND1-201ENST00000227507 KCNH3Q9ULD8 1083 aa12.99□□□□□ -0.33
CCND1-201ENST00000227507 CLEC11AQ9Y240 323 aa12.99□□□□□ -0.33
CCND1-201ENST00000227507 GOLGA8AA7E2F4 631 aa12.99□□□□□ -0.33
CCND1-201ENST00000227507 AKR1B15C9JRZ8 316 aaPredicted RBP12.99□□□□□ -0.33
CCND1-201ENST00000227507 CIAO1O76071 339 aa12.99□□□□□ -0.33
CCND1-201ENST00000227507 CCT6AP40227 531 aaKnown RBP12.99□□□□□ -0.33
CCND1-201ENST00000227507 SRGAP1Q7Z6B7 1085 aa12.99□□□□□ -0.33
CCND1-201ENST00000227507 GRAMD1CQ8IYS0 662 aa12.99□□□□□ -0.33
CCND1-201ENST00000227507 SEC31BQ9NQW1 1179 aa12.99□□□□□ -0.33
CCND1-201ENST00000227507 CCDC172P0C7W6 258 aa12.98□□□□□ -0.33
CCND1-201ENST00000227507 FAM107BQ9H098 131 aa12.98□□□□□ -0.33
CCND1-201ENST00000227507 MRFAP1Q9Y605 127 aa12.98□□□□□ -0.33
CCND1-201ENST00000227507 CARMIL3Q8ND23 1372 aa12.98□□□□□ -0.33
CCND1-201ENST00000227507 ZAP70P43403 619 aa12.98□□□□□ -0.33
CCND1-201ENST00000227507 TEX11Q8IYF3 940 aa12.98□□□□□ -0.33
CCND1-201ENST00000227507 PUS3Q9BZE2 481 aaKnown RBP12.98□□□□□ -0.33
CCND1-201ENST00000227507 KAT14Q9H8E8 782 aa12.98□□□□□ -0.33
CCND1-201ENST00000227507 XDHP47989 1333 aa12.98□□□□□ -0.33
CCND1-201ENST00000227507 A0A1W2PQ27 194 aa12.98□□□□□ -0.33
CCND1-201ENST00000227507 A0A1W2PQ64 194 aa12.98□□□□□ -0.33
CCND1-201ENST00000227507 A0A1W2PQD8 194 aa12.98□□□□□ -0.33
CCND1-201ENST00000227507 POTEB2H3BUK9 544 aa12.98□□□□□ -0.33
CCND1-201ENST00000227507 FOXN1O15353 648 aa12.98□□□□□ -0.33
CCND1-201ENST00000227507 MAP3K9P80192 1104 aa12.98□□□□□ -0.33
CCND1-201ENST00000227507 CASP8Q14790 479 aa12.98□□□□□ -0.33
CCND1-201ENST00000227507 FNBP4Q8N3X1 1017 aaPredicted RBP12.98□□□□□ -0.33
CCND1-201ENST00000227507 AFAP1L1Q8TED9 768 aa12.98□□□□□ -0.33
CCND1-201ENST00000227507 POLR2DO15514 142 aaKnown RBP12.97□□□□□ -0.33
CCND1-201ENST00000227507 IPO7O95373 1038 aaKnown RBP12.97□□□□□ -0.33
CCND1-201ENST00000227507 TSPY3P0CV98 308 aa12.97□□□□□ -0.33
CCND1-201ENST00000227507 TSPY8P0CW00 308 aa12.97□□□□□ -0.33
CCND1-201ENST00000227507 CCDC91Q7Z6B0 441 aa12.97□□□□□ -0.33
CCND1-201ENST00000227507 MYL10Q9BUA6 226 aa12.97□□□□□ -0.33
CCND1-201ENST00000227507 SAMSN1Q9NSI8 373 aaKnown RBP12.97□□□□□ -0.33
CCND1-201ENST00000227507 PPEF1O14829 653 aaPredicted RBP12.97□□□□□ -0.33
CCND1-201ENST00000227507 YEATS4O95619 227 aa12.97□□□□□ -0.33
CCND1-201ENST00000227507 CMA1P23946 247 aa12.97□□□□□ -0.33
CCND1-201ENST00000227507 KIF5BP33176 963 aa12.97□□□□□ -0.33
CCND1-201ENST00000227507 MAGEA9P43362 315 aa12.97□□□□□ -0.33
CCND1-201ENST00000227507 GYG1P46976 350 aa12.97□□□□□ -0.33
CCND1-201ENST00000227507 EIF5P55010 431 aaKnown RBP12.97□□□□□ -0.33
CCND1-201ENST00000227507 CCDC178Q5BJE1 867 aa12.97□□□□□ -0.33
CCND1-201ENST00000227507 SLC35F6Q8N357 371 aa12.97□□□□□ -0.33
CCND1-201ENST00000227507 TTLL11Q8NHH1 800 aa12.97□□□□□ -0.33
CCND1-201ENST00000227507 NOC3LQ8WTT2 800 aaKnown RBP12.97□□□□□ -0.33
CCND1-201ENST00000227507 FAM53CQ9NYF3 392 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms