RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 GJD2Q9UKL4 321 aa21.69■■□□□ 1.06
PFN1-201ENST00000225655 PLXNB2O15031 1838 aa21.69■■□□□ 1.06
PFN1-201ENST00000225655 UBE2Q1Q7Z7E8 422 aa21.68■■□□□ 1.06
PFN1-201ENST00000225655 GPRC5AQ8NFJ5 357 aa21.68■■□□□ 1.06
PFN1-201ENST00000225655 U2AF1L4Q8WU68 220 aaKnown RBP21.68■■□□□ 1.06
PFN1-201ENST00000225655 SDR42E1Q8WUS8 393 aa21.68■■□□□ 1.06
PFN1-201ENST00000225655 FEZ1Q99689 392 aa21.68■■□□□ 1.06
PFN1-201ENST00000225655 KIAA1683Q9H0B3 1180 aa21.68■■□□□ 1.06
PFN1-201ENST00000225655 TXNRD2Q9NNW7 524 aa21.68■■□□□ 1.06
PFN1-201ENST00000225655 CABP5Q9NP86 173 aa21.68■■□□□ 1.06
PFN1-201ENST00000225655 DCP1AQ9NPI6 582 aaPredicted RBP21.68■■□□□ 1.06
PFN1-201ENST00000225655 TAOK2Q9UL54 1235 aa21.68■■□□□ 1.06
PFN1-201ENST00000225655 CAPN2P17655 700 aa21.67■■□□□ 1.06
PFN1-201ENST00000225655 USP14P54578 494 aa21.67■■□□□ 1.06
PFN1-201ENST00000225655 NUCB1Q02818 461 aa21.67■■□□□ 1.06
PFN1-201ENST00000225655 CHD1LQ86WJ1 897 aa21.67■■□□□ 1.06
PFN1-201ENST00000225655 RBPJLQ9UBG7 517 aa21.67■■□□□ 1.06
PFN1-201ENST00000225655 SGPL1O95470 568 aa21.66■■□□□ 1.06
PFN1-201ENST00000225655 ARMT1Q9H993 441 aa21.66■■□□□ 1.06
PFN1-201ENST00000225655 PAK6Q9NQU5 681 aaPredicted RBP21.66■■□□□ 1.06
PFN1-201ENST00000225655 USP17L15C9J2P7 530 aa21.65■■□□□ 1.06
PFN1-201ENST00000225655 USP17L13C9JLJ4 530 aa21.65■■□□□ 1.06
PFN1-201ENST00000225655 USP17L11C9JVI0 530 aa21.65■■□□□ 1.06
PFN1-201ENST00000225655 USP17L18D6R9N7 530 aa21.65■■□□□ 1.06
PFN1-201ENST00000225655 USP17L22D6RA61 530 aa21.65■■□□□ 1.06
PFN1-201ENST00000225655 USP17L17D6RBQ6 530 aa21.65■■□□□ 1.06
PFN1-201ENST00000225655 USP17L19D6RCP7 530 aa21.65■■□□□ 1.06
PFN1-201ENST00000225655 USP17L20D6RJB6 530 aa21.65■■□□□ 1.06
PFN1-201ENST00000225655 MBD4O95243 580 aa21.65■■□□□ 1.06
PFN1-201ENST00000225655 HMGCRP04035 888 aa21.65■■□□□ 1.06
PFN1-201ENST00000225655 GUCY1A2P33402 732 aa21.65■■□□□ 1.06
PFN1-201ENST00000225655 USP17L24Q0WX57 530 aa21.65■■□□□ 1.06
PFN1-201ENST00000225655 UBE3CQ15386 1083 aa21.65■■□□□ 1.06
PFN1-201ENST00000225655 ZYXQ15942 572 aaKnown RBP21.65■■□□□ 1.06
PFN1-201ENST00000225655 ACER1Q8TDN7 264 aa21.65■■□□□ 1.06
PFN1-201ENST00000225655 ATP8A2Q9NTI2 1148 aa21.65■■□□□ 1.06
PFN1-201ENST00000225655 ECHDC1Q9NTX5 307 aa21.65■■□□□ 1.06
PFN1-201ENST00000225655 MYH8P13535 1937 aa21.65■■□□□ 1.06
PFN1-201ENST00000225655 BAZ2AQ9UIF9 1905 aaKnown RBP21.65■■□□□ 1.06
PFN1-201ENST00000225655 ERC2O15083 957 aa21.64■■□□□ 1.05
PFN1-201ENST00000225655 PEX10O60683 326 aa21.64■■□□□ 1.05
PFN1-201ENST00000225655 MAPK4P31152 587 aa21.64■■□□□ 1.05
PFN1-201ENST00000225655 ERVK-9P63128 1117 aa21.64■■□□□ 1.05
PFN1-201ENST00000225655 ERVK-24P63145 666 aa21.64■■□□□ 1.05
PFN1-201ENST00000225655 EVX2Q03828 476 aa21.64■■□□□ 1.05
PFN1-201ENST00000225655 SLFNL1Q499Z3 407 aa21.64■■□□□ 1.05
PFN1-201ENST00000225655 POTEEQ6S8J3 1075 aa21.64■■□□□ 1.05
PFN1-201ENST00000225655 LNPKQ9C0E8 428 aa21.64■■□□□ 1.05
PFN1-201ENST00000225655 SWAP70Q9UH65 585 aa21.64■■□□□ 1.05
PFN1-201ENST00000225655 TTC41PQ6P2S7 1318 aa21.63■■□□□ 1.05
PFN1-201ENST00000225655 CYP2D6P10635 497 aa21.63■■□□□ 1.05
PFN1-201ENST00000225655 VCAM1P19320 739 aa21.63■■□□□ 1.05
PFN1-201ENST00000225655 SEPT2Q15019 361 aa21.63■■□□□ 1.05
PFN1-201ENST00000225655 Q3C1V9 767 aa21.63■■□□□ 1.05
PFN1-201ENST00000225655 ZSCAN25Q6NSZ9 544 aa21.63■■□□□ 1.05
PFN1-201ENST00000225655 CATSPERGQ6ZRH7 1159 aa21.63■■□□□ 1.05
PFN1-201ENST00000225655 SOCS4Q8WXH5 440 aa21.63■■□□□ 1.05
PFN1-201ENST00000225655 DEFB118Q96PH6 123 aa21.63■■□□□ 1.05
PFN1-201ENST00000225655 PRKAB2O43741 272 aa21.62■■□□□ 1.05
PFN1-201ENST00000225655 FARP2O94887 1054 aaPredicted RBP21.62■■□□□ 1.05
PFN1-201ENST00000225655 XRCC5P13010 732 aaKnown RBP21.62■■□□□ 1.05
PFN1-201ENST00000225655 MX1P20591 662 aa21.62■■□□□ 1.05
PFN1-201ENST00000225655 NUDT12Q9BQG2 462 aa21.62■■□□□ 1.05
PFN1-201ENST00000225655 PAGR1Q9BTK6 254 aa21.62■■□□□ 1.05
PFN1-201ENST00000225655 CRISPLD2Q9H0B8 497 aa21.62■■□□□ 1.05
PFN1-201ENST00000225655 RABGAP1Q9Y3P9 1069 aa21.62■■□□□ 1.05
PFN1-201ENST00000225655 CEP290O15078 2479 aa21.62■■□□□ 1.05
PFN1-201ENST00000225655 MPHOSPH10O00566 681 aaKnown RBP21.61■■□□□ 1.05
PFN1-201ENST00000225655 TFRCP02786 760 aaKnown RBP21.61■■□□□ 1.05
PFN1-201ENST00000225655 CHGBP05060 677 aa21.61■■□□□ 1.05
PFN1-201ENST00000225655 HABP4Q5JVS0 413 aaKnown RBP21.61■■□□□ 1.05
PFN1-201ENST00000225655 TMEM179Q6ZVK1 233 aa21.61■■□□□ 1.05
PFN1-201ENST00000225655 CCAR1Q8IX12 1150 aaKnown RBP21.61■■□□□ 1.05
PFN1-201ENST00000225655 SLC44A5Q8NCS7 719 aa21.61■■□□□ 1.05
PFN1-201ENST00000225655 HTATIP2Q9BUP3 242 aa21.61■■□□□ 1.05
PFN1-201ENST00000225655 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.61■■□□□ 1.055e-7■□□□□ 11.2
PFN1-201ENST00000225655 PORCNQ9H237 461 aa21.61■■□□□ 1.05
PFN1-201ENST00000225655 H0YGN5 161 aa21.6■■□□□ 1.05
PFN1-201ENST00000225655 CYP2B6P20813 491 aa21.6■■□□□ 1.05
PFN1-201ENST00000225655 LBX2Q6XYB7 198 aa21.6■■□□□ 1.05
PFN1-201ENST00000225655 AMOTL1Q8IY63 956 aa21.6■■□□□ 1.05
PFN1-201ENST00000225655 TRIB2Q92519 343 aa21.6■■□□□ 1.05
PFN1-201ENST00000225655 DPF3Q92784 378 aa21.6■■□□□ 1.05
PFN1-201ENST00000225655 DDRGK1Q96HY6 314 aa21.6■■□□□ 1.05
PFN1-201ENST00000225655 RPTORQ8N122 1335 aa21.59■■□□□ 1.05
PFN1-201ENST00000225655 A0A1W2PRG0 241 aa21.59■■□□□ 1.05
PFN1-201ENST00000225655 CNMDO75829 334 aa21.59■■□□□ 1.05
PFN1-201ENST00000225655 GLRX3O76003 335 aaKnown RBP21.59■■□□□ 1.05
PFN1-201ENST00000225655 CCNA1P78396 465 aa21.59■■□□□ 1.05
PFN1-201ENST00000225655 C12orf60Q5U649 245 aa21.59■■□□□ 1.05
PFN1-201ENST00000225655 GPR142Q7Z601 462 aa21.59■■□□□ 1.05
PFN1-201ENST00000225655 PLEKHH3Q7Z736 793 aa21.59■■□□□ 1.05
PFN1-201ENST00000225655 TRMT44Q8IYL2 757 aaKnown RBP21.59■■□□□ 1.05
PFN1-201ENST00000225655 USP6NLQ92738 828 aa21.59■■□□□ 1.05
PFN1-201ENST00000225655 DYNLL2Q96FJ2 89 aa21.59■■□□□ 1.05
PFN1-201ENST00000225655 RPAP3Q9H6T3 665 aaPredicted RBP21.59■■□□□ 1.05
PFN1-201ENST00000225655 HMX1Q9NP08 348 aaPredicted RBP21.59■■□□□ 1.05
PFN1-201ENST00000225655 USP17L12C9JPN9 530 aa21.58■■□□□ 1.05
PFN1-201ENST00000225655 USP17L21D6R901 530 aa21.58■■□□□ 1.05
PFN1-201ENST00000225655 TRIM32Q13049 653 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms