RNA–Protein interactions for RNA: ENST00000220959.8

UBR5-201, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBR5, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-201ENST00000220959 ARHGAP44Q17R89 818 aa16.43■□□□□ 0.22
UBR5-201ENST00000220959 NXNQ6DKJ4 435 aa16.43■□□□□ 0.22
UBR5-201ENST00000220959 GLG1Q92896 1179 aa16.43■□□□□ 0.22
UBR5-201ENST00000220959 SCYL2Q6P3W7 929 aa16.43■□□□□ 0.22
UBR5-201ENST00000220959 RASSF2P50749 326 aa16.43■□□□□ 0.22
UBR5-201ENST00000220959 NONOQ15233 471 aaKnown RBP eCLIP16.43■□□□□ 0.222e-6■■■□□ 15
UBR5-201ENST00000220959 RPS6KA1Q15418 735 aa16.43■□□□□ 0.22
UBR5-201ENST00000220959 LLPHQ9BRT6 129 aaKnown RBP16.43■□□□□ 0.22
UBR5-201ENST00000220959 PPFIA2O75334 1257 aa16.42■□□□□ 0.22
UBR5-201ENST00000220959 KIF22Q14807 665 aa16.42■□□□□ 0.22
UBR5-201ENST00000220959 RNF169Q8NCN4 708 aa16.42■□□□□ 0.22
UBR5-201ENST00000220959 VCX3AQ9NNX9 186 aa16.42■□□□□ 0.22
UBR5-201ENST00000220959 DDX21Q9NR30 783 aaKnown RBP eCLIP16.42■□□□□ 0.22
UBR5-201ENST00000220959 TRIM50Q86XT4 487 aa16.42■□□□□ 0.22
UBR5-201ENST00000220959 CFAP221Q4G0U5 840 aa16.42■□□□□ 0.22
UBR5-201ENST00000220959 RNF10Q8N5U6 811 aaKnown RBP16.42■□□□□ 0.22
UBR5-201ENST00000220959 P3H4Q92791 437 aa16.42■□□□□ 0.22
UBR5-201ENST00000220959 UIMC1Q96RL1 719 aa16.42■□□□□ 0.22
UBR5-201ENST00000220959 KRT12Q99456 494 aa16.42■□□□□ 0.22
UBR5-201ENST00000220959 TRIM56Q9BRZ2 755 aaKnown RBP16.42■□□□□ 0.22
UBR5-201ENST00000220959 STMN1P16949 149 aa16.42■□□□□ 0.22
UBR5-201ENST00000220959 IRX4P78413 519 aa16.42■□□□□ 0.22
UBR5-201ENST00000220959 RAD51AP2Q09MP3 1159 aa16.42■□□□□ 0.22
UBR5-201ENST00000220959 RTEL1Q9NZ71 1219 aa16.42■□□□□ 0.22
UBR5-201ENST00000220959 APPBP2Q92624 585 aa16.42■□□□□ 0.22
UBR5-201ENST00000220959 RAB17Q9H0T7 212 aa16.42■□□□□ 0.22
UBR5-201ENST00000220959 MLXIPQ9HAP2 919 aa16.42■□□□□ 0.22
UBR5-201ENST00000220959 CTAGE3PQ8IX95 158 aa16.42■□□□□ 0.22
UBR5-201ENST00000220959 RDH13Q8NBN7 331 aa16.42■□□□□ 0.22
UBR5-201ENST00000220959 HAUS1Q96CS2 278 aa16.42■□□□□ 0.22
UBR5-201ENST00000220959 VPS37BQ9H9H4 285 aa16.42■□□□□ 0.22
UBR5-201ENST00000220959 TSKSQ9UJT2 592 aa16.42■□□□□ 0.22
UBR5-201ENST00000220959 NIM1KQ8IY84 436 aa16.42■□□□□ 0.22
UBR5-201ENST00000220959 MLKLQ8NB16 471 aa16.42■□□□□ 0.22
UBR5-201ENST00000220959 CABP7Q86V35 215 aa16.41■□□□□ 0.22
UBR5-201ENST00000220959 IQGAP2Q13576 1575 aa16.41■□□□□ 0.22
UBR5-201ENST00000220959 PALM3A6NDB9 673 aaPredicted RBP16.41■□□□□ 0.22
UBR5-201ENST00000220959 SFMBT2Q5VUG0 894 aa16.41■□□□□ 0.22
UBR5-201ENST00000220959 IWS1Q96ST2 819 aa16.41■□□□□ 0.22
UBR5-201ENST00000220959 AS3MTQ9HBK9 375 aa16.41■□□□□ 0.22
UBR5-201ENST00000220959 PAK2Q13177 524 aa16.41■□□□□ 0.22
UBR5-201ENST00000220959 ERO1AQ96HE7 468 aa16.41■□□□□ 0.22
UBR5-201ENST00000220959 GSTA1P08263 222 aa16.41■□□□□ 0.22
UBR5-201ENST00000220959 GSTA2P09210 222 aa16.41■□□□□ 0.22
UBR5-201ENST00000220959 CHMLP26374 656 aa16.41■□□□□ 0.22
UBR5-201ENST00000220959 INPP5BP32019 993 aa16.41■□□□□ 0.22
UBR5-201ENST00000220959 GNPTABQ3T906 1256 aa16.41■□□□□ 0.22
UBR5-201ENST00000220959 ARHGEF16Q5VV41 709 aa16.41■□□□□ 0.22
UBR5-201ENST00000220959 TPH2Q8IWU9 490 aa16.41■□□□□ 0.22
UBR5-201ENST00000220959 NELFCDQ8IXH7 590 aa16.41■□□□□ 0.22
UBR5-201ENST00000220959 SCYL1Q96KG9 808 aa16.41■□□□□ 0.22
UBR5-201ENST00000220959 OGFRQ9NZT2 677 aa16.41■□□□□ 0.22
UBR5-201ENST00000220959 BAG5Q9UL15 447 aa16.41■□□□□ 0.22
UBR5-201ENST00000220959 NESP48681 1621 aa16.41■□□□□ 0.22
UBR5-201ENST00000220959 GNA14O95837 355 aa16.41■□□□□ 0.22
UBR5-201ENST00000220959 BTG4Q9NY30 223 aa16.41■□□□□ 0.22
UBR5-201ENST00000220959 PHBP35232 272 aa16.41■□□□□ 0.22
UBR5-201ENST00000220959 MTMR3Q13615 1198 aa16.41■□□□□ 0.22
UBR5-201ENST00000220959 HADHQ16836 314 aaKnown RBP16.41■□□□□ 0.22
UBR5-201ENST00000220959 PSPC1Q8WXF1 523 aaKnown RBP16.41■□□□□ 0.22
UBR5-201ENST00000220959 TROVE2P10155 538 aaKnown RBP eCLIP16.41■□□□□ 0.22
UBR5-201ENST00000220959 CLCN1P35523 988 aa16.41■□□□□ 0.22
UBR5-201ENST00000220959 NUCKS1Q9H1E3 243 aaKnown RBP16.41■□□□□ 0.22
UBR5-201ENST00000220959 CCDC87Q9NVE4 849 aa16.41■□□□□ 0.22
UBR5-201ENST00000220959 RNMTO43148 476 aaKnown RBP16.4■□□□□ 0.22
UBR5-201ENST00000220959 MAP3K21Q5TCX8 1036 aa16.4■□□□□ 0.22
UBR5-201ENST00000220959 NOP9Q86U38 636 aaKnown RBP16.4■□□□□ 0.22
UBR5-201ENST00000220959 DLGAP5Q15398 846 aa16.4■□□□□ 0.22
UBR5-201ENST00000220959 CCDC68Q9H2F9 335 aa16.4■□□□□ 0.22
UBR5-201ENST00000220959 POTEDQ86YR6 584 aa16.4■□□□□ 0.22
UBR5-201ENST00000220959 TOPBP1Q92547 1522 aa16.4■□□□□ 0.22
UBR5-201ENST00000220959 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.4■□□□□ 0.22
UBR5-201ENST00000220959 DCTPP1Q9H773 170 aa16.4■□□□□ 0.22
UBR5-201ENST00000220959 ASXL1Q8IXJ9 1541 aa16.4■□□□□ 0.22
UBR5-201ENST00000220959 TMTC4Q5T4D3 741 aa16.4■□□□□ 0.22
UBR5-201ENST00000220959 TMTC1Q8IUR5 882 aa16.4■□□□□ 0.22
UBR5-201ENST00000220959 SKA2Q8WVK7 121 aaPredicted RBP16.4■□□□□ 0.22
UBR5-201ENST00000220959 MMS19Q96T76 1030 aa16.4■□□□□ 0.22
UBR5-201ENST00000220959 FANCCQ00597 558 aa16.4■□□□□ 0.22
UBR5-201ENST00000220959 CABS1Q96KC9 395 aa16.4■□□□□ 0.22
UBR5-201ENST00000220959 PSMB7Q99436 277 aa16.4■□□□□ 0.22
UBR5-201ENST00000220959 NBPF3Q9H094 633 aa16.4■□□□□ 0.22
UBR5-201ENST00000220959 GPAA1O43292 621 aa16.4■□□□□ 0.22
UBR5-201ENST00000220959 WHAMMQ8TF30 809 aa16.4■□□□□ 0.22
UBR5-201ENST00000220959 RASSF4Q9H2L5 321 aa16.4■□□□□ 0.22
UBR5-201ENST00000220959 MGARPQ8TDB4 240 aa16.39■□□□□ 0.22
UBR5-201ENST00000220959 ADPGKQ9BRR6 497 aa16.39■□□□□ 0.22
UBR5-201ENST00000220959 AMFRQ9UKV5 643 aa16.39■□□□□ 0.22
UBR5-201ENST00000220959 ARHGAP4P98171 946 aa16.39■□□□□ 0.21
UBR5-201ENST00000220959 IFRD2Q12894 506 aaPredicted RBP16.39■□□□□ 0.21
UBR5-201ENST00000220959 SOS1Q07889 1333 aaPredicted RBP16.39■□□□□ 0.21
UBR5-201ENST00000220959 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.39■□□□□ 0.213e-7■■□□□ 12.5
UBR5-201ENST00000220959 XAGE2Q96GT9 111 aa16.39■□□□□ 0.21
UBR5-201ENST00000220959 SH3TC1Q8TE82 1336 aa16.39■□□□□ 0.21
UBR5-201ENST00000220959 TNNC2P02585 160 aa16.39■□□□□ 0.21
UBR5-201ENST00000220959 ALDH1B1P30837 517 aa16.39■□□□□ 0.21
UBR5-201ENST00000220959 PLBD2Q8NHP8 589 aa16.39■□□□□ 0.21
UBR5-201ENST00000220959 NELFBQ8WX92 580 aa16.39■□□□□ 0.21
UBR5-201ENST00000220959 PDZD4Q76G19 769 aaPredicted RBP16.39■□□□□ 0.21
UBR5-201ENST00000220959 ZBTB8OSQ8IWT0 167 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms