RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 PAK1Q13153 545 aa12.21□□□□□ -0.46
USP31-201ENST00000219689 ZCCHC17Q9NP64 241 aaKnown RBP12.21□□□□□ -0.46
USP31-201ENST00000219689 CABP1Q9NZU7 370 aa12.21□□□□□ -0.46
USP31-201ENST00000219689 H0Y3Z8 333 aa12.21□□□□□ -0.46
USP31-201ENST00000219689 GFAPP14136 432 aa12.21□□□□□ -0.46
USP31-201ENST00000219689 KIF22Q14807 665 aa12.21□□□□□ -0.46
USP31-201ENST00000219689 ACBD5Q5T8D3 534 aaPredicted RBP12.21□□□□□ -0.46
USP31-201ENST00000219689 CSRNP2Q9H175 543 aa12.21□□□□□ -0.46
USP31-201ENST00000219689 DKC1O60832 514 aaKnown RBP eCLIP12.2□□□□□ -0.46
USP31-201ENST00000219689 RXRAP19793 462 aa12.2□□□□□ -0.46
USP31-201ENST00000219689 NR1D1P20393 614 aa12.2□□□□□ -0.46
USP31-201ENST00000219689 SLC7A5Q01650 507 aa12.2□□□□□ -0.46
USP31-201ENST00000219689 MCMDC2Q4G0Z9 681 aa12.2□□□□□ -0.46
USP31-201ENST00000219689 NBPF14Q5TI25 921 aa12.2□□□□□ -0.46
USP31-201ENST00000219689 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.2□□□□□ -0.46
USP31-201ENST00000219689 DNAJC6O75061 913 aa12.2□□□□□ -0.46
USP31-201ENST00000219689 NAIF1Q69YI7 327 aaPredicted RBP12.2□□□□□ -0.46
USP31-201ENST00000219689 LRRC8CQ8TDW0 803 aa12.2□□□□□ -0.46
USP31-201ENST00000219689 DPH5Q9H2P9 285 aa12.2□□□□□ -0.46
USP31-201ENST00000219689 ABCB6Q9NP58 842 aa12.2□□□□□ -0.46
USP31-201ENST00000219689 CDC23Q9UJX2 597 aa12.2□□□□□ -0.46
USP31-201ENST00000219689 KRT5P13647 590 aa12.2□□□□□ -0.46
USP31-201ENST00000219689 EEF1B2P24534 225 aaKnown RBP12.2□□□□□ -0.46
USP31-201ENST00000219689 LONP1P36776 959 aaKnown RBP12.2□□□□□ -0.46
USP31-201ENST00000219689 HDLBPQ00341 1268 aaKnown RBP12.2□□□□□ -0.46
USP31-201ENST00000219689 SPZ1Q9BXG8 430 aa12.2□□□□□ -0.46
USP31-201ENST00000219689 ENC1O14682 589 aa12.2□□□□□ -0.46
USP31-201ENST00000219689 MAP3K12Q12852 859 aa12.2□□□□□ -0.46
USP31-201ENST00000219689 NLRP7Q8WX94 980 aa12.2□□□□□ -0.46
USP31-201ENST00000219689 SNRKQ9NRH2 765 aa12.2□□□□□ -0.46
USP31-201ENST00000219689 C9orf84Q5VXU9 1444 aa12.2□□□□□ -0.46
USP31-201ENST00000219689 THAP12O43422 761 aa12.2□□□□□ -0.46
USP31-201ENST00000219689 CUL3Q13618 768 aa12.2□□□□□ -0.46
USP31-201ENST00000219689 SLC35F6Q8N357 371 aa12.2□□□□□ -0.46
USP31-201ENST00000219689 VPS37BQ9H9H4 285 aa12.2□□□□□ -0.46
USP31-201ENST00000219689 PARP2Q9UGN5 583 aa12.2□□□□□ -0.46
USP31-201ENST00000219689 ZSCAN20P17040 1043 aaPredicted RBP12.2□□□□□ -0.46
USP31-201ENST00000219689 ZNF280CQ8ND82 737 aa12.2□□□□□ -0.46
USP31-201ENST00000219689 CCHCR1Q8TD31 782 aa12.2□□□□□ -0.46
USP31-201ENST00000219689 GNAT2P19087 354 aa12.2□□□□□ -0.46
USP31-201ENST00000219689 USP37Q86T82 979 aa12.2□□□□□ -0.46
USP31-201ENST00000219689 AFAP1L2Q8N4X5 818 aa12.2□□□□□ -0.46
USP31-201ENST00000219689 THOC1Q96FV9 657 aaKnown RBP12.2□□□□□ -0.46
USP31-201ENST00000219689 EIF2AQ9BY44 585 aaKnown RBP12.2□□□□□ -0.46
USP31-201ENST00000219689 DRC3Q9H069 523 aa12.2□□□□□ -0.46
USP31-201ENST00000219689 BUB1O43683 1085 aa12.19□□□□□ -0.46
USP31-201ENST00000219689 FAM13AO94988 1023 aa12.19□□□□□ -0.46
USP31-201ENST00000219689 IFIT1BQ5T764 474 aaKnown RBP12.19□□□□□ -0.46
USP31-201ENST00000219689 ZNF449Q6P9G9 518 aa12.19□□□□□ -0.46
USP31-201ENST00000219689 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.19□□□□□ -0.46
USP31-201ENST00000219689 RMDN2Q96LZ7 410 aa12.19□□□□□ -0.46
USP31-201ENST00000219689 MAP3K2Q9Y2U5 619 aa12.19□□□□□ -0.46
USP31-201ENST00000219689 PSDA5PKW4 1024 aaPredicted RBP12.19□□□□□ -0.46
USP31-201ENST00000219689 RPS6KB1P23443 525 aa12.19□□□□□ -0.46
USP31-201ENST00000219689 NBPF20Q3BBV1 942 aa12.19□□□□□ -0.46
USP31-201ENST00000219689 CCDC89Q8N998 374 aa12.19□□□□□ -0.46
USP31-201ENST00000219689 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.19□□□□□ -0.46
USP31-201ENST00000219689 CCDC68Q9H2F9 335 aa12.19□□□□□ -0.46
USP31-201ENST00000219689 TPRP12270 2363 aaKnown RBP12.19□□□□□ -0.46
USP31-201ENST00000219689 PSMD7P51665 324 aa12.19□□□□□ -0.46
USP31-201ENST00000219689 CABP4P57796 275 aa12.19□□□□□ -0.46
USP31-201ENST00000219689 NAA30Q147X3 362 aaPredicted RBP12.19□□□□□ -0.46
USP31-201ENST00000219689 CCDC93Q567U6 631 aa12.19□□□□□ -0.46
USP31-201ENST00000219689 FLOT1O75955 427 aa12.19□□□□□ -0.46
USP31-201ENST00000219689 ANKRD20A4Q4UJ75 823 aa12.19□□□□□ -0.46
USP31-201ENST00000219689 ANKRD20A8PQ5CZ79 823 aa12.19□□□□□ -0.46
USP31-201ENST00000219689 ANKRD20A2Q5SQ80 823 aa12.19□□□□□ -0.46
USP31-201ENST00000219689 ANKRD20A1Q5TYW2 823 aa12.19□□□□□ -0.46
USP31-201ENST00000219689 SLC4A4Q9Y6R1 1079 aa12.19□□□□□ -0.46
USP31-201ENST00000219689 USHBP1Q8N6Y0 703 aa12.19□□□□□ -0.46
USP31-201ENST00000219689 MBIPQ9NS73 344 aa12.19□□□□□ -0.46
USP31-201ENST00000219689 DPH6Q7L8W6 267 aa12.19□□□□□ -0.46
USP31-201ENST00000219689 RPGRQ92834 1020 aaKnown RBP12.19□□□□□ -0.46
USP31-201ENST00000219689 LZTS1Q9Y250 596 aa12.19□□□□□ -0.46
USP31-201ENST00000219689 CCDC151A5D8V7 595 aa12.19□□□□□ -0.46
USP31-201ENST00000219689 PTPN21Q16825 1174 aa12.19□□□□□ -0.46
USP31-201ENST00000219689 SYCE1Q8N0S2 351 aa12.19□□□□□ -0.46
USP31-201ENST00000219689 TRIP11Q15643 1979 aa12.19□□□□□ -0.46
USP31-201ENST00000219689 EP400NLQ6ZTU2 488 aa12.19□□□□□ -0.46
USP31-201ENST00000219689 ENAHQ8N8S7 591 aaPredicted RBP12.19□□□□□ -0.46
USP31-201ENST00000219689 POLR1AO95602 1720 aaPredicted RBP12.18□□□□□ -0.46
USP31-201ENST00000219689 SERPINI2O75830 405 aa12.18□□□□□ -0.46
USP31-201ENST00000219689 CHGBP05060 677 aa12.18□□□□□ -0.46
USP31-201ENST00000219689 VWA3BQ502W6 1294 aa12.18□□□□□ -0.46
USP31-201ENST00000219689 ZNF444Q8N0Y2 327 aaPredicted RBP12.18□□□□□ -0.46
USP31-201ENST00000219689 TEKT1Q969V4 418 aa12.18□□□□□ -0.46
USP31-201ENST00000219689 ECT2Q9H8V3 914 aa12.18□□□□□ -0.46
USP31-201ENST00000219689 AATFQ9NY61 560 aaKnown RBP eCLIP12.18□□□□□ -0.46
USP31-201ENST00000219689 STXBP3O00186 592 aa12.18□□□□□ -0.46
USP31-201ENST00000219689 PDCLQ13371 301 aa12.18□□□□□ -0.46
USP31-201ENST00000219689 SLC9C1Q4G0N8 1177 aa12.18□□□□□ -0.46
USP31-201ENST00000219689 TOM1L2Q6ZVM7 507 aa12.18□□□□□ -0.46
USP31-201ENST00000219689 KAT14Q9H8E8 782 aa12.18□□□□□ -0.46
USP31-201ENST00000219689 ITSN2Q9NZM3 1697 aa12.18□□□□□ -0.46
USP31-201ENST00000219689 HYOU1Q9Y4L1 999 aa12.18□□□□□ -0.46
USP31-201ENST00000219689 CXCR5P32302 372 aa12.18□□□□□ -0.46
USP31-201ENST00000219689 MAGEA1P43355 309 aa12.18□□□□□ -0.46
USP31-201ENST00000219689 ZNF174Q15697 407 aa12.18□□□□□ -0.46
USP31-201ENST00000219689 ALS2CLQ60I27 953 aa12.18□□□□□ -0.46
USP31-201ENST00000219689 DAAM1Q9Y4D1 1078 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms