RNA–Protein interactions for RNA: ENST00000219302.7

NME3-201, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME3, Length 1,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-201ENST00000219302 USP5P45974 858 aa19.21■□□□□ 0.67
NME3-201ENST00000219302 USP17L24Q0WX57 530 aa19.21■□□□□ 0.67
NME3-201ENST00000219302 CEP85Q6P2H3 762 aa19.21■□□□□ 0.67
NME3-201ENST00000219302 TMED8Q6PL24 325 aaPredicted RBP19.21■□□□□ 0.67
NME3-201ENST00000219302 CATSPERGQ6ZRH7 1159 aa19.21■□□□□ 0.67
NME3-201ENST00000219302 ITPRIPQ8IWB1 547 aa19.21■□□□□ 0.67
NME3-201ENST00000219302 FTSJ3Q8IY81 847 aaKnown RBP19.21■□□□□ 0.67
NME3-201ENST00000219302 ZKSCAN1P17029 563 aaPredicted RBP19.2■□□□□ 0.66
NME3-201ENST00000219302 CCND3P30281 292 aaPredicted RBP19.2■□□□□ 0.66
NME3-201ENST00000219302 PLCD1P51178 756 aa19.2■□□□□ 0.66
NME3-201ENST00000219302 MAP3K12Q12852 859 aa19.2■□□□□ 0.66
NME3-201ENST00000219302 CERKLQ49MI3 558 aaPredicted RBP19.2■□□□□ 0.66
NME3-201ENST00000219302 TTC6Q86TZ1 520 aa19.2■□□□□ 0.66
NME3-201ENST00000219302 ACER1Q8TDN7 264 aa19.2■□□□□ 0.66
NME3-201ENST00000219302 RIOK1Q9BRS2 568 aaKnown RBP19.2■□□□□ 0.66
NME3-201ENST00000219302 KIAA1683Q9H0B3 1180 aa19.2■□□□□ 0.66
NME3-201ENST00000219302 COL6A3P12111 3177 aa19.2■□□□□ 0.66
NME3-201ENST00000219302 MYH1P12882 1939 aa19.19■□□□□ 0.66
NME3-201ENST00000219302 SYN1P17600 705 aa19.19■□□□□ 0.66
NME3-201ENST00000219302 GUCY1A2P33402 732 aa19.19■□□□□ 0.66
NME3-201ENST00000219302 SHMT1P34896 483 aa19.19■□□□□ 0.66
NME3-201ENST00000219302 USP14P54578 494 aa19.19■□□□□ 0.66
NME3-201ENST00000219302 MAP2K5Q13163 448 aa19.19■□□□□ 0.66
NME3-201ENST00000219302 ZYXQ15942 572 aaKnown RBP19.19■□□□□ 0.66
NME3-201ENST00000219302 LBX2Q6XYB7 198 aa19.19■□□□□ 0.66
NME3-201ENST00000219302 CCAR1Q8IX12 1150 aaKnown RBP19.19■□□□□ 0.66
NME3-201ENST00000219302 APBA2Q99767 749 aa19.19■□□□□ 0.66
NME3-201ENST00000219302 DDX60LQ5H9U9 1706 aaKnown RBP19.19■□□□□ 0.66
NME3-201ENST00000219302 RAB3GAP1Q15042 981 aa19.18■□□□□ 0.66
NME3-201ENST00000219302 ABCB5Q2M3G0 1257 aa19.18■□□□□ 0.66
NME3-201ENST00000219302 AACSQ86V21 672 aa19.18■□□□□ 0.66
NME3-201ENST00000219302 EDC3Q96F86 508 aaKnown RBP19.18■□□□□ 0.66
NME3-201ENST00000219302 FEZ1Q99689 392 aa19.18■□□□□ 0.66
NME3-201ENST00000219302 EXOC6BQ9Y2D4 811 aa19.18■□□□□ 0.66
NME3-201ENST00000219302 VCAM1P19320 739 aa19.17■□□□□ 0.66
NME3-201ENST00000219302 PTPREP23469 700 aa19.17■□□□□ 0.66
NME3-201ENST00000219302 MAGEA10P43363 369 aaPredicted RBP19.17■□□□□ 0.66
NME3-201ENST00000219302 CCNA1P78396 465 aa19.17■□□□□ 0.66
NME3-201ENST00000219302 GABPAQ06546 454 aa19.17■□□□□ 0.66
NME3-201ENST00000219302 GPR153Q6NV75 609 aa19.17■□□□□ 0.66
NME3-201ENST00000219302 ERC1Q8IUD2 1116 aa19.17■□□□□ 0.66
NME3-201ENST00000219302 FLRT1Q9NZU1 646 aa19.17■□□□□ 0.66
NME3-201ENST00000219302 BTBD7Q9P203 1132 aa19.17■□□□□ 0.66
NME3-201ENST00000219302 SLC15A5A6NIM6 579 aa19.16■□□□□ 0.66
NME3-201ENST00000219302 IGHA2P01877 340 aa19.16■□□□□ 0.66
NME3-201ENST00000219302 LRIT3Q3SXY7 679 aa19.16■□□□□ 0.66
NME3-201ENST00000219302 CABP5Q9NP86 173 aa19.16■□□□□ 0.66
NME3-201ENST00000219302 GLRX3O76003 335 aaKnown RBP19.15■□□□□ 0.66
NME3-201ENST00000219302 HOXC6P09630 235 aa19.15■□□□□ 0.66
NME3-201ENST00000219302 EVX2Q03828 476 aa19.15■□□□□ 0.66
NME3-201ENST00000219302 LRRC26Q2I0M4 334 aa19.15■□□□□ 0.66
NME3-201ENST00000219302 A0A0C4DFX4 3053 aa19.14■□□□□ 0.66
NME3-201ENST00000219302 MAGEB6P1A0A0J9YX57 407 aa19.14■□□□□ 0.65
NME3-201ENST00000219302 A0A1W2PRG0 241 aa19.14■□□□□ 0.65
NME3-201ENST00000219302 SPDYE16A6NNV3 312 aaPredicted RBP19.14■□□□□ 0.65
NME3-201ENST00000219302 POLR3DP05423 398 aaPredicted RBP19.14■□□□□ 0.65
NME3-201ENST00000219302 HNRNPUQ00839 825 aaKnown RBP eCLIP19.14■□□□□ 0.65
NME3-201ENST00000219302 GRB14Q14449 540 aa19.14■□□□□ 0.65
NME3-201ENST00000219302 SEPT2Q15019 361 aa19.14■□□□□ 0.65
NME3-201ENST00000219302 NPLOC4Q8TAT6 608 aa19.14■□□□□ 0.65
NME3-201ENST00000219302 RHPN1Q8TCX5 695 aa19.14■□□□□ 0.65
NME3-201ENST00000219302 RPAP3Q9H6T3 665 aaPredicted RBP19.14■□□□□ 0.65
NME3-201ENST00000219302 IL1RAPL2Q9NP60 686 aa19.14■□□□□ 0.65
NME3-201ENST00000219302 PDE6AP16499 860 aa19.13■□□□□ 0.65
NME3-201ENST00000219302 TTF1Q15361 905 aaPredicted RBP19.13■□□□□ 0.65
NME3-201ENST00000219302 SLC9C2Q5TAH2 1124 aa19.13■□□□□ 0.65
NME3-201ENST00000219302 MFSD14CQ5VZR4 134 aa19.13■□□□□ 0.65
NME3-201ENST00000219302 TDHQ8IZJ6 230 aa19.13■□□□□ 0.65
NME3-201ENST00000219302 SLC17A8Q8NDX2 589 aa19.13■□□□□ 0.65
NME3-201ENST00000219302 PANK1Q8TE04 598 aa19.13■□□□□ 0.65
NME3-201ENST00000219302 CWC22Q9HCG8 908 aaKnown RBP19.13■□□□□ 0.65
NME3-201ENST00000219302 DNAH12Q6ZR08 3092 aa19.12■□□□□ 0.65
NME3-201ENST00000219302 TCRBV5S4A2TA0A5A2 114 aa19.12■□□□□ 0.65
NME3-201ENST00000219302 HSP90AB4PQ58FF6 505 aa19.12■□□□□ 0.65
NME3-201ENST00000219302 WDR78Q5VTH9 848 aa19.12■□□□□ 0.65
NME3-201ENST00000219302 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.12■□□□□ 0.65
NME3-201ENST00000219302 UBE2OQ9C0C9 1292 aaKnown RBP19.12■□□□□ 0.65
NME3-201ENST00000219302 MCM9Q9NXL9 1143 aa19.12■□□□□ 0.65
NME3-201ENST00000219302 ATP2B2Q01814 1243 aa19.11■□□□□ 0.65
NME3-201ENST00000219302 COG2Q14746 738 aa19.11■□□□□ 0.65
NME3-201ENST00000219302 TRPV1Q8NER1 839 aa19.11■□□□□ 0.65
NME3-201ENST00000219302 CRNKL1Q9BZJ0 848 aaKnown RBP19.11■□□□□ 0.65
NME3-201ENST00000219302 DCP1AQ9NPI6 582 aaPredicted RBP19.11■□□□□ 0.65
NME3-201ENST00000219302 HOXC10Q9NYD6 342 aa19.11■□□□□ 0.65
NME3-201ENST00000219302 DDX20Q9UHI6 824 aaKnown RBP19.11■□□□□ 0.65
NME3-201ENST00000219302 ZNF532Q9HCE3 1301 aa19.1■□□□□ 0.65
NME3-201ENST00000219302 CYP2C19P33261 490 aa19.1■□□□□ 0.65
NME3-201ENST00000219302 KIAA1755Q5JYT7 1200 aa19.1■□□□□ 0.65
NME3-201ENST00000219302 SIAH1Q8IUQ4 282 aa19.1■□□□□ 0.65
NME3-201ENST00000219302 DEFB123Q8N688 67 aa19.1■□□□□ 0.65
NME3-201ENST00000219302 SDR42E1Q8WUS8 393 aa19.1■□□□□ 0.65
NME3-201ENST00000219302 LPAR1Q92633 364 aa19.1■□□□□ 0.65
NME3-201ENST00000219302 MOV10L1Q9BXT6 1211 aaKnown RBP19.1■□□□□ 0.65
NME3-201ENST00000219302 IVNS1ABPQ9Y6Y0 642 aa19.1■□□□□ 0.65
NME3-201ENST00000219302 MSCO60682 206 aa19.09■□□□□ 0.65
NME3-201ENST00000219302 CYP2D6P10635 497 aa19.09■□□□□ 0.65
NME3-201ENST00000219302 Q7L0L9 218 aa19.09■□□□□ 0.65
NME3-201ENST00000219302 SIRT2Q8IXJ6 389 aa19.09■□□□□ 0.65
NME3-201ENST00000219302 CLASRPQ8N2M8 674 aaKnown RBP19.09■□□□□ 0.65
NME3-201ENST00000219302 LCORLQ8N3X6 602 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms