RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 ANAPC4Q9UJX5 808 aa10.23□□□□□ -0.77
MTHFD1-201ENST00000216605 C4AP0C0L4 1744 aa10.23□□□□□ -0.77
MTHFD1-201ENST00000216605 IFNAR1P17181 557 aa10.23□□□□□ -0.77
MTHFD1-201ENST00000216605 KIF23Q02241 960 aaPredicted RBP10.23□□□□□ -0.77
MTHFD1-201ENST00000216605 TIGD1Q96MW7 591 aa10.23□□□□□ -0.77
MTHFD1-201ENST00000216605 TTC12Q9H892 705 aaPredicted RBP10.23□□□□□ -0.77
MTHFD1-201ENST00000216605 DBNDD1Q9H9R9 158 aa10.23□□□□□ -0.77
MTHFD1-201ENST00000216605 SPTLC3Q9NUV7 552 aa10.23□□□□□ -0.77
MTHFD1-201ENST00000216605 V9GY48 417 aaPredicted RBP10.23□□□□□ -0.77
MTHFD1-201ENST00000216605 TNRC6CQ9HCJ0 1690 aaKnown RBP10.23□□□□□ -0.77
MTHFD1-201ENST00000216605 SPTLC2O15270 562 aa10.22□□□□□ -0.77
MTHFD1-201ENST00000216605 GUCY1A2P33402 732 aa10.22□□□□□ -0.77
MTHFD1-201ENST00000216605 SLC44A5Q8NCS7 719 aa10.22□□□□□ -0.77
MTHFD1-201ENST00000216605 TTF2Q9UNY4 1162 aaKnown RBP10.22□□□□□ -0.77
MTHFD1-201ENST00000216605 MROH7-TTC4A0A0A0MT08 1334 aa10.22□□□□□ -0.77
MTHFD1-201ENST00000216605 A0A1B0GVL5 298 aa10.22□□□□□ -0.77
MTHFD1-201ENST00000216605 KIF28PB7ZC32 967 aa10.22□□□□□ -0.77
MTHFD1-201ENST00000216605 DEXIO95424 95 aa10.22□□□□□ -0.77
MTHFD1-201ENST00000216605 FMNL1O95466 1100 aaPredicted RBP10.22□□□□□ -0.77
MTHFD1-201ENST00000216605 PLCG2P16885 1265 aa10.22□□□□□ -0.77
MTHFD1-201ENST00000216605 CHRNA5P30532 468 aa10.22□□□□□ -0.77
MTHFD1-201ENST00000216605 SEMA3FQ13275 785 aa10.22□□□□□ -0.77
MTHFD1-201ENST00000216605 ATL3Q6DD88 541 aa10.22□□□□□ -0.77
MTHFD1-201ENST00000216605 EYA3Q99504 573 aa10.22□□□□□ -0.77
MTHFD1-201ENST00000216605 MXD3Q9BW11 206 aa10.22□□□□□ -0.77
MTHFD1-201ENST00000216605 FAM217BQ9NTX9 383 aaPredicted RBP10.22□□□□□ -0.77
MTHFD1-201ENST00000216605 RCOR1Q9UKL0 485 aa10.22□□□□□ -0.77
MTHFD1-201ENST00000216605 GOLGA6L6A8MZA4 724 aa10.22□□□□□ -0.77
MTHFD1-201ENST00000216605 BTBD18B2RXH4 712 aa10.22□□□□□ -0.77
MTHFD1-201ENST00000216605 CALM1P0DP23 149 aa10.22□□□□□ -0.77
MTHFD1-201ENST00000216605 CALM2P0DP24 149 aa10.22□□□□□ -0.77
MTHFD1-201ENST00000216605 CALM3P0DP25 149 aa10.22□□□□□ -0.77
MTHFD1-201ENST00000216605 PCP11498 1178 aaKnown RBP10.22□□□□□ -0.77
MTHFD1-201ENST00000216605 ANO1Q5XXA6 986 aa10.22□□□□□ -0.77
MTHFD1-201ENST00000216605 DIS3L2Q8IYB7 885 aaKnown RBP10.22□□□□□ -0.77
MTHFD1-201ENST00000216605 COA1Q9GZY4 146 aa10.22□□□□□ -0.77
MTHFD1-201ENST00000216605 ZNF287Q9HBT7 754 aa10.22□□□□□ -0.77
MTHFD1-201ENST00000216605 IRF6O14896 467 aa10.21□□□□□ -0.77
MTHFD1-201ENST00000216605 SATB1Q01826 763 aa10.21□□□□□ -0.77
MTHFD1-201ENST00000216605 NTRK3Q16288 839 aa10.21□□□□□ -0.77
MTHFD1-201ENST00000216605 POTEAQ6S8J7 498 aa10.21□□□□□ -0.77
MTHFD1-201ENST00000216605 NBPF11Q86T75 865 aa10.21□□□□□ -0.77
MTHFD1-201ENST00000216605 IFNLR1Q8IU57 520 aaPredicted RBP10.21□□□□□ -0.77
MTHFD1-201ENST00000216605 CRACR2BQ8N4Y2 399 aaPredicted RBP10.21□□□□□ -0.77
MTHFD1-201ENST00000216605 KCNG4Q8TDN1 519 aa10.21□□□□□ -0.77
MTHFD1-201ENST00000216605 PCDHA7Q9UN72 937 aa10.21□□□□□ -0.77
MTHFD1-201ENST00000216605 BAZ2AQ9UIF9 1905 aaKnown RBP10.21□□□□□ -0.77
MTHFD1-201ENST00000216605 MYH13Q9UKX3 1938 aa10.21□□□□□ -0.77
MTHFD1-201ENST00000216605 PLEKHA8P1O95397 391 aa10.21□□□□□ -0.78
MTHFD1-201ENST00000216605 IL1R1P14778 569 aa10.21□□□□□ -0.78
MTHFD1-201ENST00000216605 C12orf60Q5U649 245 aa10.21□□□□□ -0.78
MTHFD1-201ENST00000216605 EP400NLQ6ZTU2 488 aa10.21□□□□□ -0.78
MTHFD1-201ENST00000216605 ZNF710Q8N1W2 664 aa10.21□□□□□ -0.78
MTHFD1-201ENST00000216605 VPS54Q9P1Q0 977 aa10.21□□□□□ -0.78
MTHFD1-201ENST00000216605 COL24A1Q17RW2 1714 aa10.21□□□□□ -0.78
MTHFD1-201ENST00000216605 USP17L3A6NCW0 530 aa10.2□□□□□ -0.78
MTHFD1-201ENST00000216605 USP17L4A6NCW7 530 aa10.2□□□□□ -0.78
MTHFD1-201ENST00000216605 PLCD1P51178 756 aa10.2□□□□□ -0.78
MTHFD1-201ENST00000216605 SEC23AQ15436 765 aa10.2□□□□□ -0.78
MTHFD1-201ENST00000216605 SLC15A2Q16348 729 aa10.2□□□□□ -0.78
MTHFD1-201ENST00000216605 PPP4R3CPQ6ZMV5 832 aa10.2□□□□□ -0.78
MTHFD1-201ENST00000216605 USP17L1Q7RTZ2 530 aa10.2□□□□□ -0.78
MTHFD1-201ENST00000216605 ILDR1Q86SU0 546 aaPredicted RBP10.2□□□□□ -0.78
MTHFD1-201ENST00000216605 PDCL2Q8N4E4 241 aa10.2□□□□□ -0.78
MTHFD1-201ENST00000216605 JMYQ8N9B5 988 aa10.2□□□□□ -0.78
MTHFD1-201ENST00000216605 MRPS27Q92552 414 aaKnown RBP10.2□□□□□ -0.78
MTHFD1-201ENST00000216605 MTA3Q9BTC8 594 aa10.2□□□□□ -0.78
MTHFD1-201ENST00000216605 BRMS1Q9HCU9 246 aa10.2□□□□□ -0.78
MTHFD1-201ENST00000216605 RTEL1Q9NZ71 1219 aa10.2□□□□□ -0.78
MTHFD1-201ENST00000216605 UBR3Q6ZT12 1888 aa10.2□□□□□ -0.78
MTHFD1-201ENST00000216605 TTC36A6NLP5 189 aa10.2□□□□□ -0.78
MTHFD1-201ENST00000216605 ATP2B2Q01814 1243 aa10.2□□□□□ -0.78
MTHFD1-201ENST00000216605 TYRO3Q06418 890 aa10.2□□□□□ -0.78
MTHFD1-201ENST00000216605 SBK1Q52WX2 424 aa10.2□□□□□ -0.78
MTHFD1-201ENST00000216605 C15orf52Q6ZUT6 534 aaKnown RBP10.2□□□□□ -0.78
MTHFD1-201ENST00000216605 ZSCAN29Q8IWY8 852 aaPredicted RBP10.2□□□□□ -0.78
MTHFD1-201ENST00000216605 LINC00301Q8NCQ3 95 aa10.2□□□□□ -0.78
MTHFD1-201ENST00000216605 TSC1Q92574 1164 aa10.2□□□□□ -0.78
MTHFD1-201ENST00000216605 MYCBPQ99417 103 aaPredicted RBP10.2□□□□□ -0.78
MTHFD1-201ENST00000216605 CLSTN2Q9H4D0 955 aa10.2□□□□□ -0.78
MTHFD1-201ENST00000216605 RBM28Q9NW13 759 aaKnown RBP10.2□□□□□ -0.78
MTHFD1-201ENST00000216605 ORC4O43929 436 aa10.2□□□□□ -0.78
MTHFD1-201ENST00000216605 KIF5BP33176 963 aa10.2□□□□□ -0.78
MTHFD1-201ENST00000216605 KIAA0825Q8IV33 1275 aa10.2□□□□□ -0.78
MTHFD1-201ENST00000216605 DOCK2Q92608 1830 aa10.2□□□□□ -0.78
MTHFD1-201ENST00000216605 ERCC4Q92889 916 aaPredicted RBP10.2□□□□□ -0.78
MTHFD1-201ENST00000216605 RTFDC1Q9BY42 306 aaPredicted RBP10.2□□□□□ -0.78
MTHFD1-201ENST00000216605 USP40Q9NVE5 1235 aa10.2□□□□□ -0.78
MTHFD1-201ENST00000216605 PPP1R1BQ9UD71 204 aaPredicted RBP10.2□□□□□ -0.78
MTHFD1-201ENST00000216605 CEP83Q9Y592 693 aa10.2□□□□□ -0.78
MTHFD1-201ENST00000216605 IRS2Q9Y4H2 1338 aa10.19□□□□□ -0.78
MTHFD1-201ENST00000216605 YEATS4O95619 227 aa10.19□□□□□ -0.78
MTHFD1-201ENST00000216605 NR5A1Q13285 461 aa10.19□□□□□ -0.78
MTHFD1-201ENST00000216605 PPP2R5BQ15173 497 aa10.19□□□□□ -0.78
MTHFD1-201ENST00000216605 DEFB132Q7Z7B7 95 aa10.19□□□□□ -0.78
MTHFD1-201ENST00000216605 PNMA1Q8ND90 353 aa10.19□□□□□ -0.78
MTHFD1-201ENST00000216605 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.19□□□□□ -0.78
MTHFD1-201ENST00000216605 NLRP5P59047 1200 aa10.19□□□□□ -0.78
MTHFD1-201ENST00000216605 MAP2K1Q02750 393 aaPredicted RBP10.19□□□□□ -0.78
MTHFD1-201ENST00000216605 FAM160A1Q05DH4 1040 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms