RNA–Protein interactions for RNA: ENST00000194152.3

PCDHB4-201, Transcript of protocadherin beta 4, humanhuman

APPRIS P1 BASIC

Gene PCDHB4, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-201ENST00000194152 RASGRP2Q7LDG7 609 aa14.67□□□□□ -0.06
PCDHB4-201ENST00000194152 NAP1L1P55209 391 aaKnown RBP14.66□□□□□ -0.06
PCDHB4-201ENST00000194152 ZSCAN10Q96SZ4 725 aaPredicted RBP14.66□□□□□ -0.06
PCDHB4-201ENST00000194152 TTC31Q49AM3 519 aaPredicted RBP14.66□□□□□ -0.06
PCDHB4-201ENST00000194152 KRI1Q8N9T8 703 aaKnown RBP14.66□□□□□ -0.06
PCDHB4-201ENST00000194152 SH3RF3Q8TEJ3 882 aaPredicted RBP14.66□□□□□ -0.06
PCDHB4-201ENST00000194152 CYP2C19P33261 490 aa14.66□□□□□ -0.06
PCDHB4-201ENST00000194152 TXLNAP40222 546 aa14.66□□□□□ -0.06
PCDHB4-201ENST00000194152 TNNI2P48788 182 aa14.66□□□□□ -0.06
PCDHB4-201ENST00000194152 TEX2Q8IWB9 1127 aa14.66□□□□□ -0.06
PCDHB4-201ENST00000194152 LINC00301Q8NCQ3 95 aa14.66□□□□□ -0.06
PCDHB4-201ENST00000194152 ANKRD2Q9GZV1 360 aa14.66□□□□□ -0.06
PCDHB4-201ENST00000194152 ZMYM6O95789 1325 aa14.66□□□□□ -0.06
PCDHB4-201ENST00000194152 ATP1A3P13637 1013 aa14.65□□□□□ -0.06
PCDHB4-201ENST00000194152 CCT6AP40227 531 aaKnown RBP14.65□□□□□ -0.06
PCDHB4-201ENST00000194152 UBA7P41226 1012 aa14.65□□□□□ -0.06
PCDHB4-201ENST00000194152 EP400NLQ6ZTU2 488 aa14.65□□□□□ -0.06
PCDHB4-201ENST00000194152 USP49Q70CQ1 688 aa14.65□□□□□ -0.06
PCDHB4-201ENST00000194152 VEZTQ9HBM0 779 aa14.65□□□□□ -0.06
PCDHB4-201ENST00000194152 TTF2Q9UNY4 1162 aaKnown RBP14.65□□□□□ -0.06
PCDHB4-201ENST00000194152 PNMA6AP0CW24 399 aaPredicted RBP14.65□□□□□ -0.06
PCDHB4-201ENST00000194152 BTDP43251 543 aa14.65□□□□□ -0.06
PCDHB4-201ENST00000194152 DNA2P51530 1060 aa14.65□□□□□ -0.06
PCDHB4-201ENST00000194152 GRIN1Q05586 938 aa14.65□□□□□ -0.06
PCDHB4-201ENST00000194152 SPTY2D1Q68D10 685 aaPredicted RBP14.65□□□□□ -0.06
PCDHB4-201ENST00000194152 CCDC102AQ96A19 550 aa14.65□□□□□ -0.06
PCDHB4-201ENST00000194152 CASQ1P31415 396 aa14.65□□□□□ -0.06
PCDHB4-201ENST00000194152 USP17L2Q6R6M4 530 aa14.65□□□□□ -0.06
PCDHB4-201ENST00000194152 BRAPQ7Z569 592 aa14.65□□□□□ -0.06
PCDHB4-201ENST00000194152 LY9Q9HBG7 655 aa14.65□□□□□ -0.06
PCDHB4-201ENST00000194152 LDHCP07864 332 aa14.64□□□□□ -0.07
PCDHB4-201ENST00000194152 KRT2P35908 639 aa14.64□□□□□ -0.07
PCDHB4-201ENST00000194152 UBE4AQ14139 1066 aa14.64□□□□□ -0.07
PCDHB4-201ENST00000194152 NOSTRINQ8IVI9 506 aa14.64□□□□□ -0.07
PCDHB4-201ENST00000194152 EPSTI1Q96J88 318 aa14.64□□□□□ -0.07
PCDHB4-201ENST00000194152 SRRTQ9BXP5 876 aaKnown RBP14.64□□□□□ -0.07
PCDHB4-201ENST00000194152 RPS6KA4O75676 772 aa14.64□□□□□ -0.07
PCDHB4-201ENST00000194152 DEXIO95424 95 aa14.64□□□□□ -0.07
PCDHB4-201ENST00000194152 KRT18P05783 430 aaKnown RBP14.64□□□□□ -0.07
PCDHB4-201ENST00000194152 XPO4Q9C0E2 1151 aaKnown RBP14.64□□□□□ -0.07
PCDHB4-201ENST00000194152 VPS18Q9P253 973 aa14.64□□□□□ -0.07
PCDHB4-201ENST00000194152 HPS5Q9UPZ3 1129 aa14.64□□□□□ -0.07
PCDHB4-201ENST00000194152 CBFA2T2O43439 604 aa14.64□□□□□ -0.07
PCDHB4-201ENST00000194152 WDHD1O75717 1129 aaPredicted RBP14.64□□□□□ -0.07
PCDHB4-201ENST00000194152 SNAP25P60880 206 aa14.64□□□□□ -0.07
PCDHB4-201ENST00000194152 RRAGBQ5VZM2 374 aa14.64□□□□□ -0.07
PCDHB4-201ENST00000194152 TMTC2Q8N394 836 aa14.64□□□□□ -0.07
PCDHB4-201ENST00000194152 PNMA1Q8ND90 353 aa14.64□□□□□ -0.07
PCDHB4-201ENST00000194152 CARD6Q9BX69 1037 aa14.64□□□□□ -0.07
PCDHB4-201ENST00000194152 TANGO6Q9C0B7 1094 aa14.64□□□□□ -0.07
PCDHB4-201ENST00000194152 PLEKHA4Q9H4M7 779 aa14.64□□□□□ -0.07
PCDHB4-201ENST00000194152 PCDHA5Q9Y5H7 936 aa14.64□□□□□ -0.07
PCDHB4-201ENST00000194152 SPATA31A5Q5VU36 1347 aa14.64□□□□□ -0.07
PCDHB4-201ENST00000194152 SPATA31A7Q8IWB4 1347 aa14.64□□□□□ -0.07
PCDHB4-201ENST00000194152 SLC16A2P36021 539 aa14.63□□□□□ -0.07
PCDHB4-201ENST00000194152 LONRF3Q496Y0 759 aa14.63□□□□□ -0.07
PCDHB4-201ENST00000194152 CCDC178Q5BJE1 867 aa14.63□□□□□ -0.07
PCDHB4-201ENST00000194152 AMIGO3Q86WK7 504 aa14.63□□□□□ -0.07
PCDHB4-201ENST00000194152 BANK1Q8NDB2 785 aa14.63□□□□□ -0.07
PCDHB4-201ENST00000194152 CCDC47Q96A33 483 aaKnown RBP14.63□□□□□ -0.07
PCDHB4-201ENST00000194152 BSDC1Q9NW68 430 aaPredicted RBP14.63□□□□□ -0.07
PCDHB4-201ENST00000194152 NARFQ9UHQ1 456 aa14.63□□□□□ -0.07
PCDHB4-201ENST00000194152 LCMT1Q9UIC8 334 aa14.63□□□□□ -0.07
PCDHB4-201ENST00000194152 CDHR2Q9BYE9 1310 aa14.63□□□□□ -0.07
PCDHB4-201ENST00000194152 KIF5BP33176 963 aa14.63□□□□□ -0.07
PCDHB4-201ENST00000194152 INF2Q27J81 1249 aa14.63□□□□□ -0.07
PCDHB4-201ENST00000194152 HSP90B2PQ58FF3 399 aa14.63□□□□□ -0.07
PCDHB4-201ENST00000194152 ADALQ6DHV7 355 aa14.63□□□□□ -0.07
PCDHB4-201ENST00000194152 DPP8Q6V1X1 898 aaPredicted RBP14.63□□□□□ -0.07
PCDHB4-201ENST00000194152 LRRC8AQ8IWT6 810 aa14.63□□□□□ -0.07
PCDHB4-201ENST00000194152 ENAHQ8N8S7 591 aaPredicted RBP14.63□□□□□ -0.07
PCDHB4-201ENST00000194152 RNF216Q9NWF9 866 aaPredicted RBP14.63□□□□□ -0.07
PCDHB4-201ENST00000194152 KIAA1468Q9P260 1216 aa14.63□□□□□ -0.07
PCDHB4-201ENST00000194152 RCOR1Q9UKL0 485 aa14.63□□□□□ -0.07
PCDHB4-201ENST00000194152 XRN1Q8IZH2 1706 aaKnown RBP14.63□□□□□ -0.07
PCDHB4-201ENST00000194152 RGPD5Q99666 1765 aa14.63□□□□□ -0.07
PCDHB4-201ENST00000194152 FBXO3Q9UK99 471 aa14.63□□□□□ -0.07
PCDHB4-201ENST00000194152 RRP15Q9Y3B9 282 aaKnown RBP14.62□□□□□ -0.07
PCDHB4-201ENST00000194152 MNAT1P51948 309 aa14.62□□□□□ -0.07
PCDHB4-201ENST00000194152 GJD4Q96KN9 370 aaPredicted RBP14.62□□□□□ -0.07
PCDHB4-201ENST00000194152 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.62□□□□□ -0.07
PCDHB4-201ENST00000194152 BIN2Q9UBW5 565 aaPredicted RBP14.62□□□□□ -0.07
PCDHB4-201ENST00000194152 SMC1AQ14683 1233 aaKnown RBP14.62□□□□□ -0.07
PCDHB4-201ENST00000194152 CEP131Q9UPN4 1083 aa14.62□□□□□ -0.07
PCDHB4-201ENST00000194152 KARSQ15046 597 aaKnown RBP14.61□□□□□ -0.07
PCDHB4-201ENST00000194152 SYCP1Q15431 976 aa14.61□□□□□ -0.07
PCDHB4-201ENST00000194152 ICE2Q659A1 982 aa14.61□□□□□ -0.07
PCDHB4-201ENST00000194152 SPICE1Q8N0Z3 855 aa14.61□□□□□ -0.07
PCDHB4-201ENST00000194152 CSRNP2Q9H175 543 aa14.61□□□□□ -0.07
PCDHB4-201ENST00000194152 POLD4Q9HCU8 107 aa14.61□□□□□ -0.07
PCDHB4-201ENST00000194152 FANCLQ9NW38 375 aa14.61□□□□□ -0.07
PCDHB4-201ENST00000194152 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.61□□□□□ -0.07
PCDHB4-201ENST00000194152 PKD2L1Q9P0L9 805 aa14.61□□□□□ -0.07
PCDHB4-201ENST00000194152 PARP3Q9Y6F1 533 aa14.61□□□□□ -0.07
PCDHB4-201ENST00000194152 TCHHQ07283 1943 aa14.61□□□□□ -0.07
PCDHB4-201ENST00000194152 TXKP42681 527 aa14.61□□□□□ -0.07
PCDHB4-201ENST00000194152 GRIK5Q16478 980 aa14.61□□□□□ -0.07
PCDHB4-201ENST00000194152 STAG2Q8N3U4 1231 aa14.61□□□□□ -0.07
PCDHB4-201ENST00000194152 EYA3Q99504 573 aa14.61□□□□□ -0.07
PCDHB4-201ENST00000194152 RABEP2Q9H5N1 569 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms