RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 Ercc6lQ8BHK9 1240 aa17.38■□□□□ 0.37
Upf1-202ENSMUST00000215817 Luzp1Q8R4U7 1068 aaKnown RBP17.38■□□□□ 0.37
Upf1-202ENSMUST00000215817 Lzts2Q91YU6 671 aa17.38■□□□□ 0.37
Upf1-202ENSMUST00000215817 Gpaa1Q9WTK3 621 aa17.38■□□□□ 0.37
Upf1-202ENSMUST00000215817 Rhpn1Q61085 643 aa17.38■□□□□ 0.37
Upf1-202ENSMUST00000215817 Baiap2l1Q9DBJ3 514 aa17.38■□□□□ 0.37
Upf1-202ENSMUST00000215817 Acot3Q9QYR7 432 aa17.38■□□□□ 0.37
Upf1-202ENSMUST00000215817 Prr7Q3V0I2 269 aa17.37■□□□□ 0.37
Upf1-202ENSMUST00000215817 Kif5bQ61768 963 aa17.37■□□□□ 0.37
Upf1-202ENSMUST00000215817 Cnga2Q62398 664 aa17.37■□□□□ 0.37
Upf1-202ENSMUST00000215817 Terb1Q8C0V1 768 aa17.37■□□□□ 0.37
Upf1-202ENSMUST00000215817 4931408C20RikE9PWP9 1381 aa17.37■□□□□ 0.37
Upf1-202ENSMUST00000215817 MyocO70624 490 aa17.37■□□□□ 0.37
Upf1-202ENSMUST00000215817 Ppp1r1bQ60829 194 aa17.37■□□□□ 0.37
Upf1-202ENSMUST00000215817 TrdnE9Q9K5 693 aa17.37■□□□□ 0.37
Upf1-202ENSMUST00000215817 L1camP11627 1260 aa17.37■□□□□ 0.37
Upf1-202ENSMUST00000215817 ErmnQ5EBJ4 281 aa17.37■□□□□ 0.37
Upf1-202ENSMUST00000215817 Ccdc122Q8BVN0 290 aa17.37■□□□□ 0.37
Upf1-202ENSMUST00000215817 Cfap52Q5F201 620 aa17.37■□□□□ 0.37
Upf1-202ENSMUST00000215817 RragbQ6NTA4 374 aa17.37■□□□□ 0.37
Upf1-202ENSMUST00000215817 Necab1Q8BG18 352 aa17.37■□□□□ 0.37
Upf1-202ENSMUST00000215817 Unc13bQ9Z1N9 1602 aa17.36■□□□□ 0.37
Upf1-202ENSMUST00000215817 Tbc1d2B1AVH7 922 aa17.36■□□□□ 0.37
Upf1-202ENSMUST00000215817 Ccdc6D3YZP9 469 aa17.36■□□□□ 0.37
Upf1-202ENSMUST00000215817 NcapgE9PWG6 1004 aa17.36■□□□□ 0.37
Upf1-202ENSMUST00000215817 Stxbp2Q64324 593 aa17.36■□□□□ 0.37
Upf1-202ENSMUST00000215817 Exoc3Q6KAR6 755 aa17.36■□□□□ 0.37
Upf1-202ENSMUST00000215817 Spon1Q8VCC9 807 aa17.36■□□□□ 0.37
Upf1-202ENSMUST00000215817 Aldh1b1Q9CZS1 519 aa17.36■□□□□ 0.37
Upf1-202ENSMUST00000215817 Tmem191cQ9JJB1 302 aa17.36■□□□□ 0.37
Upf1-202ENSMUST00000215817 1700006A11RikB9EHI3 544 aa17.36■□□□□ 0.37
Upf1-202ENSMUST00000215817 Klrk1O54709 232 aa17.36■□□□□ 0.37
Upf1-202ENSMUST00000215817 Slc27a1Q60714 646 aa17.36■□□□□ 0.37
Upf1-202ENSMUST00000215817 NkapQ9D0F4 415 aaKnown RBP17.36■□□□□ 0.37
Upf1-202ENSMUST00000215817 Cfap45Q9D9U9 551 aa17.36■□□□□ 0.37
Upf1-202ENSMUST00000215817 Prg3Q9JL95 222 aa17.36■□□□□ 0.37
Upf1-202ENSMUST00000215817 1700018F24RikB2RW27 314 aa17.36■□□□□ 0.37
Upf1-202ENSMUST00000215817 LrmpQ60664 539 aa17.36■□□□□ 0.37
Upf1-202ENSMUST00000215817 Asic1Q6NXK8 526 aa17.36■□□□□ 0.37
Upf1-202ENSMUST00000215817 Atp1a3Q6PIC6 1013 aa17.36■□□□□ 0.37
Upf1-202ENSMUST00000215817 Tmem39bQ810L4 492 aa17.36■□□□□ 0.37
Upf1-202ENSMUST00000215817 Cwc15Q9JHS9 229 aaKnown RBP17.36■□□□□ 0.37
Upf1-202ENSMUST00000215817 Rhbdl3P58873 404 aa17.35■□□□□ 0.37
Upf1-202ENSMUST00000215817 Hps6Q8BLY7 805 aa17.35■□□□□ 0.37
Upf1-202ENSMUST00000215817 Pkd2l2Q9JLG4 621 aa17.35■□□□□ 0.37
Upf1-202ENSMUST00000215817 Tigd5Q499M4 642 aa17.35■□□□□ 0.37
Upf1-202ENSMUST00000215817 Trex1Q91XB0 314 aa17.35■□□□□ 0.37
Upf1-202ENSMUST00000215817 Foxp1P58462 705 aa17.35■□□□□ 0.37
Upf1-202ENSMUST00000215817 Ssrp1Q08943 708 aaKnown RBP17.35■□□□□ 0.37
Upf1-202ENSMUST00000215817 Otud5Q3U2S4 566 aa17.35■□□□□ 0.37
Upf1-202ENSMUST00000215817 Cdca8Q8BHX3 289 aa17.35■□□□□ 0.37
Upf1-202ENSMUST00000215817 Glis2Q8VDL9 521 aa17.35■□□□□ 0.37
Upf1-202ENSMUST00000215817 Sema3eP70275 775 aa17.35■□□□□ 0.37
Upf1-202ENSMUST00000215817 Tll1Q62381 1013 aa17.35■□□□□ 0.37
Upf1-202ENSMUST00000215817 Cnpy3Q9DAU1 276 aa17.35■□□□□ 0.37
Upf1-202ENSMUST00000215817 Nlrp5Q9R1M5 1163 aa17.35■□□□□ 0.37
Upf1-202ENSMUST00000215817 BC048507Q80ZS7 89 aa17.34■□□□□ 0.37
Upf1-202ENSMUST00000215817 Usp44Q8C2S0 711 aa17.34■□□□□ 0.37
Upf1-202ENSMUST00000215817 Tph1P17532 447 aa17.34■□□□□ 0.37
Upf1-202ENSMUST00000215817 Frmd3Q8BHD4 595 aa17.34■□□□□ 0.37
Upf1-202ENSMUST00000215817 Ttc8Q8VD72 515 aa17.34■□□□□ 0.37
Upf1-202ENSMUST00000215817 Bmp2kQ91Z96 1138 aa17.34■□□□□ 0.37
Upf1-202ENSMUST00000215817 ImpactO55091 318 aa17.34■□□□□ 0.37
Upf1-202ENSMUST00000215817 P4ha1Q60715 534 aa17.34■□□□□ 0.37
Upf1-202ENSMUST00000215817 Swap70Q6A028 585 aaKnown RBP17.34■□□□□ 0.37
Upf1-202ENSMUST00000215817 Col18a1P39061 1774 aa17.34■□□□□ 0.37
Upf1-202ENSMUST00000215817 Csf1rP09581 977 aa17.33■□□□□ 0.37
Upf1-202ENSMUST00000215817 MaeaQ4VC33 396 aa17.33■□□□□ 0.37
Upf1-202ENSMUST00000215817 Islr2Q5RKR3 745 aa17.33■□□□□ 0.37
Upf1-202ENSMUST00000215817 Rgl1Q60695 768 aa17.33■□□□□ 0.37
Upf1-202ENSMUST00000215817 Tmem47Q9JJG6 181 aa17.33■□□□□ 0.37
Upf1-202ENSMUST00000215817 Map2P20357 1828 aa17.33■□□□□ 0.37
Upf1-202ENSMUST00000215817 Llgl2Q3TJ91 1027 aa17.33■□□□□ 0.37
Upf1-202ENSMUST00000215817 Knop1Q9Z2Q2 478 aaKnown RBP17.33■□□□□ 0.37
Upf1-202ENSMUST00000215817 Cdkn1cP49919 348 aa17.33■□□□□ 0.36
Upf1-202ENSMUST00000215817 Tbc1d9bQ5SVR0 1263 aa17.33■□□□□ 0.36
Upf1-202ENSMUST00000215817 Leo1Q5XJE5 667 aa17.33■□□□□ 0.36
Upf1-202ENSMUST00000215817 Nap1l1P28656 391 aaKnown RBP17.33■□□□□ 0.36
Upf1-202ENSMUST00000215817 Mmp20P57748 482 aa17.33■□□□□ 0.36
Upf1-202ENSMUST00000215817 Atp11aP98197 1187 aa17.33■□□□□ 0.36
Upf1-202ENSMUST00000215817 EgfrQ01279 1210 aa17.33■□□□□ 0.36
Upf1-202ENSMUST00000215817 Gse1Q3U3C9 1213 aa17.33■□□□□ 0.36
Upf1-202ENSMUST00000215817 Ccdc34Q3UI66 367 aa17.33■□□□□ 0.36
Upf1-202ENSMUST00000215817 Bbs9Q811G0 885 aa17.33■□□□□ 0.36
Upf1-202ENSMUST00000215817 Adgra1Q8C4G9 578 aa17.33■□□□□ 0.36
Upf1-202ENSMUST00000215817 Frat2Q8K025 231 aa17.33■□□□□ 0.36
Upf1-202ENSMUST00000215817 Ptpn23Q6PB44 1692 aa17.32■□□□□ 0.36
Upf1-202ENSMUST00000215817 PparaP23204 468 aa17.32■□□□□ 0.36
Upf1-202ENSMUST00000215817 Ndufv1Q91YT0 464 aa17.32■□□□□ 0.36
Upf1-202ENSMUST00000215817 4921524L21RikQ9D5T2 438 aa17.32■□□□□ 0.36
Upf1-202ENSMUST00000215817 Fyb2A2A995 729 aa17.32■□□□□ 0.36
Upf1-202ENSMUST00000215817 Pald1P70261 859 aa17.32■□□□□ 0.36
Upf1-202ENSMUST00000215817 Stk39Q9Z1W9 556 aa17.32■□□□□ 0.36
Upf1-202ENSMUST00000215817 Ccdc78D3Z5T1 437 aa17.32■□□□□ 0.36
Upf1-202ENSMUST00000215817 CalrP14211 416 aaKnown RBP17.32■□□□□ 0.36
Upf1-202ENSMUST00000215817 Rnf216P58283 853 aa17.32■□□□□ 0.36
Upf1-202ENSMUST00000215817 Sh3d21Q7TSG5 549 aa17.32■□□□□ 0.36
Upf1-202ENSMUST00000215817 Znf131Q8K3J5 619 aa17.32■□□□□ 0.36
Upf1-202ENSMUST00000215817 Aox1O54754 1333 aa17.31■□□□□ 0.36
Upf1-202ENSMUST00000215817 Cyp3a59D3Z2W7 503 aa17.31■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 42.8 ms