RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 Gabpb2P81069 414 aa10.89□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Cbx1P83917 185 aaKnown RBP10.89□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Bach2P97303 839 aa10.89□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Spata18Q0P557 537 aa10.89□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Nod2Q8K3Z0 1020 aa10.89□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Polr2dQ9D7M8 142 aaKnown RBP10.89□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Myh3P13541 1940 aa10.89□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Sdc2P43407 202 aa10.89□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Luc7l2Q7TNC4 392 aaKnown RBP10.89□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Eif6O55135 245 aa10.89□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 EgfrQ01279 1210 aa10.89□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Lrrd1Q8C0R9 853 aa10.89□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Calml3Q9D6P8 149 aa10.89□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 RabggtaQ9JHK4 567 aa10.89□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Tmem47Q9JJG6 181 aa10.89□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Myh4Q5SX39 1939 aa10.89□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 A0A1W2P6Q8 802 aa10.88□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Gm9048A0A1W2P7H4 802 aa10.88□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 A0A1W2P7Z8 802 aa10.88□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Gm9046A0A1W2P855 802 aa10.88□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Brpf3B2KF05 1204 aaKnown RBP10.88□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Adam7O35227 789 aa10.88□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Cyp7b1Q60991 507 aa10.88□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Cyp4x1Q6A152 507 aa10.88□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Dnaaf2Q8BPI1 814 aa10.88□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 SltmQ8CH25 1031 aaKnown RBP10.88□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Olfr247E9PVJ7 320 aa10.88□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Olfr819K7N727 320 aa10.88□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Fhdc1Q3ULZ2 1149 aa10.88□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Lrrcc1Q69ZB0 1026 aa10.88□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Mxd3Q80US8 206 aa10.88□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Brms1Q99N20 246 aa10.88□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Sept14Q9DA97 430 aa10.88□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Tbc1d2B1AVH7 922 aa10.88□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Ifi207E9Q3L4 978 aa10.88□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Usp17lbE9Q9U0 468 aa10.88□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 MthfslL7N466 203 aa10.88□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Ces3aQ63880 571 aa10.88□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Tas2r124Q7M718 309 aa10.88□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Hs2st1Q8R3H7 356 aa10.88□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Ces3bQ8VCU1 571 aa10.88□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Baiap2l1Q9DBJ3 514 aa10.88□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Trmt112Q9DCG9 125 aa10.88□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 GdaQ9R111 454 aa10.88□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Atp12aQ9Z1W8 1035 aa10.88□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Scn11aQ9R053 1765 aa10.88□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Pfkfb3A7UAK5 555 aa10.87□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 C4bP01029 1738 aa10.87□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 DSCC1Q14AI0 399 aa10.87□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Fam89aQ14BJ1 175 aa10.87□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 KhnynQ80U38 671 aa10.87□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Prkag3Q8BGM7 489 aa10.87□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Ccdc96Q9CR92 584 aa10.87□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Etnk1Q9D4V0 363 aa10.87□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Plch1Q4KWH5 1682 aa10.87□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Tbc1d30Q69ZT9 766 aa10.87□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Dpp8Q80YA7 892 aa10.87□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Haus7Q8BKT8 364 aa10.87□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Hic2Q9JLZ6 619 aaKnown RBP10.87□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Myh2G3UW82 1942 aa10.87□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Kcnj4P52189 445 aa10.87□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Ncf1Q09014 390 aa10.87□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 E4f1Q8CCE9 783 aa10.87□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Q8K2W9 541 aa10.87□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Ndufb9Q9CQJ8 179 aa10.87□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Akap8Q9DBR0 687 aaKnown RBP10.87□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Gm36210A0A1B0GS00 229 aa10.87□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Stag2O35638 1231 aa10.87□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Gna11P21278 359 aa10.87□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Alppl2P24823 529 aa10.87□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Ca8P28651 291 aa10.87□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Eef2P58252 858 aaKnown RBP10.87□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Eif5P59325 429 aaKnown RBP10.87□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Ctdspl2Q8BG15 465 aa10.87□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Csrnp2Q8BGQ2 534 aa10.87□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Mad2l2Q9D752 211 aa10.87□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Tfap4Q9JIZ5 338 aa10.87□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Cnpy2Q9QXT0 182 aa10.87□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Phldb3E9QAF4 648 aa10.86□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Gja5Q01231 358 aa10.86□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Tob2Q9JM55 345 aa10.86□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Slc27a3O88561 667 aa10.86□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Mindy4Q3UQI9 744 aa10.86□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Rc3h1Q4VGL6 1130 aaKnown RBP10.86□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Rhpn1Q61085 643 aa10.86□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 EvplQ9D952 2035 aa10.86□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Nup98Q6PFD9 1816 aaKnown RBP10.86□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 CebpzP53569 1052 aaKnown RBP10.86□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Sun3Q5SS91 320 aa10.86□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Vps53Q8CCB4 832 aa10.86□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Mybl2P48972 704 aa10.85□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Zkscan4Q5SZT6 480 aa10.85□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Cypt2Q6P924 180 aa10.85□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Ano6Q6P9J9 911 aa10.85□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Dnaaf4Q8R368 420 aa10.85□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Mx2Q9WVP9 655 aa10.85□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Myh15E9Q264 1925 aa10.85□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Nucb2P81117 420 aa10.85□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 Trappc10Q3TLI0 1259 aa10.85□□□□□ -0.67
Sh3rf1-202ENSMUST00000209611 C87499Q3UX49 493 aa10.85□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 86.3 ms