RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Q8C1R3 189 aa9.89□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Mei1Q9D4I2 1268 aa9.89□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Clic4Q9QYB1 253 aa9.89□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Trpm1Q2TV84 1622 aa9.89□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Rsrc2A2RTL5 376 aaKnown RBP9.89□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Bin2D3Z6Q9 489 aa9.89□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Slc12a2P55012 1205 aa9.89□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Nlrp4fQ66X05 959 aa9.89□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Larp6Q8BN59 492 aa9.89□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Slc13a4Q8BZ82 625 aa9.89□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Yeats4Q9CR11 227 aaKnown RBP9.89□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Ube4aE9Q735 1028 aa9.88□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Eddm13E9Q7F5 164 aa9.88□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Cyp2c68K7N6C2 491 aa9.88□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Gm28047Q3US59 414 aa9.88□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Hirip3Q8BLH7 601 aa9.88□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Dis3l2Q8CI75 870 aaKnown RBP9.88□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Hps4Q99KG7 671 aa9.88□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Rdm1Q9CQK3 281 aa9.88□□□□□ -0.83
Col28a1-201ENSMUST00000115537 ErmapQ9JLN5 566 aa9.88□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Zc3h13E9Q784 1729 aaKnown RBP9.88□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Cntnap1O54991 1385 aa9.88□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Col14a1Q80X19 1797 aa9.88□□□□□ -0.83
Col28a1-201ENSMUST00000115537 A0A1W2P6Q8 802 aa9.88□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Gm9048A0A1W2P7H4 802 aa9.88□□□□□ -0.83
Col28a1-201ENSMUST00000115537 A0A1W2P7Z8 802 aa9.88□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Gm9046A0A1W2P855 802 aa9.88□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Glt1d1A4FUP9 346 aa9.88□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Cacna2d1O08532 1103 aa9.88□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Magea6O89010 325 aa9.88□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Atp8a2P98200 1148 aa9.88□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Plbd2Q3TCN2 594 aa9.88□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Eif3j1Q3UGC7 261 aaKnown RBP9.88□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Eif3j2Q66JS6 263 aa9.88□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Magea3Q6T340 320 aa9.88□□□□□ -0.83
Col28a1-201ENSMUST00000115537 LnpkQ7TQ95 425 aa9.88□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Rassf6Q80UQ2 353 aa9.88□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Clca2Q8BG22 942 aa9.88□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Cep55Q8BT07 462 aa9.88□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Nek11Q8C0Q4 628 aa9.88□□□□□ -0.83
Col28a1-201ENSMUST00000115537 ClasrpQ8CFC7 668 aa9.88□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Ano2Q8CFW1 1002 aa9.88□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Taf5lQ91WQ5 589 aa9.88□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Xrcc4Q924T3 326 aa9.88□□□□□ -0.83
Col28a1-201ENSMUST00000115537 C3P01027 1663 aa9.88□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Map7d1A2AJI0 846 aa9.88□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Ctdnep1Q3TP92 244 aa9.88□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Elf1Q60775 612 aa9.88□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Prkag3Q8BGM7 489 aa9.88□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Ehd2Q8BH64 543 aa9.88□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Strip1Q8C079 837 aa9.88□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Ciapin1Q8WTY4 309 aa9.88□□□□□ -0.83
Col28a1-201ENSMUST00000115537 RictorQ6QI06 1708 aa9.88□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Gm43638A0A0J9YU36 694 aa9.87□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Celf1P28659 486 aaKnown RBP9.87□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Dnm1P39053 867 aa9.87□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Psen1P49769 467 aa9.87□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Cdkl5Q3UTQ8 938 aa9.87□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Eme2Q56A04 373 aa9.87□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Tsr1Q5SWD9 803 aa9.87□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Klra4Q60651 263 aa9.87□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Acbd3Q8BMP6 525 aa9.87□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Dctpp1Q9QY93 170 aa9.87□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Fut8Q9WTS2 575 aa9.87□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Brwd3A2AHJ4 1799 aa9.87□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Cyp26c1B2RXA7 518 aa9.87□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Il15P48346 162 aa9.87□□□□□ -0.83
Col28a1-201ENSMUST00000115537 HmmrQ00547 794 aaKnown RBP9.87□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Specc1Q5SXY1 1067 aa9.87□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Ttc12Q8BW49 704 aa9.87□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Znf131Q8K3J5 619 aa9.87□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Klhl10Q9D5V2 608 aa9.87□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Uso1Q9Z1Z0 959 aaKnown RBP9.87□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Hdhd2Q3UGR5 259 aa9.87□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Lrrc1Q80VQ1 524 aa9.87□□□□□ -0.83
Col28a1-201ENSMUST00000115537 IqcgQ80W32 419 aa9.87□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Znf287Q9EQB9 759 aa9.87□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Dpp7Q9ET22 506 aa9.87□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Kcnh3Q9WVJ0 1095 aa9.87□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Dennd3A2RT67 1274 aa9.87□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Opa1P58281 960 aa9.87□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Slc8a1P70414 970 aa9.87□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Nxf7Q80SZ6 620 aaKnown RBP9.87□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Efcab14Q8BGQ6 484 aa9.87□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Slc4a8Q8JZR6 1089 aa9.87□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Sar1bQ9CQC9 198 aa9.87□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Sil1Q9EPK6 465 aa9.87□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Vstm4T1NXB5 319 aa9.87□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Ccdc24E9PUW8 296 aa9.86□□□□□ -0.83
Col28a1-201ENSMUST00000115537 VimP20152 466 aaKnown RBP9.86□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Wdr44Q6NVE8 915 aa9.86□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Ddx31Q6NZQ2 687 aaKnown RBP9.86□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Rrp1bQ91YK2 724 aaKnown RBP9.86□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Vps16Q920Q4 839 aa9.86□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Smco2Q9DA21 347 aa9.86□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Actn2Q9JI91 894 aa9.86□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Stat2Q9WVL2 923 aa9.86□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Tcof1O08784 1320 aaKnown RBP9.86□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Pde8bE9Q4S1 865 aa9.86□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Tspyl3Q3UYP3 334 aa9.86□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 23 ms