RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Parp1P11103 1013 aaKnown RBP17.37■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Bst2Q8R2Q8 172 aa17.37■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 EhhadhQ9DBM2 718 aa17.37■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Parp14Q2EMV9 1817 aa17.37■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Kif5bQ61768 963 aa17.37■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Krt39Q6IFX4 482 aa17.37■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 StambpQ9CQ26 424 aa17.37■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Azi2Q9QYP6 405 aa17.37■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Stk39Q9Z1W9 556 aa17.37■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Atp10bB1AWN4 1474 aa17.37■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Qser1A2BIE1 1698 aa17.37■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Kif17Q99PW8 1038 aa17.37■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Abcc10Q8R4P9 1501 aa17.36■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 GlmnQ8BZM1 596 aa17.36■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Fermt2Q8CIB5 680 aa17.36■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Lonp2Q9DBN5 852 aa17.36■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Tmem131lQ3U3D7 1597 aa17.36■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Rsph10bE9PYQ0 876 aa17.36■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Ccdc85cE9Q6B2 420 aa17.36■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Pls1Q3V0K9 630 aa17.36■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Calcoco1Q8CGU1 691 aa17.36■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Gja10Q9WUS4 505 aa17.36■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Usp32F8VPZ3 1604 aa17.36■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Ubn2Q80WC1 1314 aa17.36■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Adamts7Q68SA9 1657 aa17.36■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Mtss1lQ6P9S0 715 aa17.36■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Ehd2Q8BH64 543 aa17.36■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Ano3A2AHL1 981 aa17.36■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Zscan18E9PUD6 809 aa17.36■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Madcam1Q61826 405 aa17.36■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Rps6ka5Q8C050 863 aa17.36■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Ccdc186Q8C9S4 917 aa17.36■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 HibadhQ99L13 335 aaKnown RBP17.36■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Ccdc89Q9DA73 370 aa17.36■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Ccdc189Q6NZQ0 333 aa17.35■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Tubb2aQ7TMM9 445 aa17.35■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Srp68Q8BMA6 625 aaKnown RBP17.35■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Pdia6Q922R8 440 aaKnown RBP17.35■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Tubb2bQ9CWF2 445 aa17.35■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Map7d1A2AJI0 846 aa17.35■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Exoc3Q6KAR6 755 aa17.35■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Rbm15bQ6PHZ5 887 aaKnown RBP17.35■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Nap1l4Q78ZA7 375 aaKnown RBP17.35■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Ccdc113Q8C5T8 377 aa17.35■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Ppil4Q9CXG3 492 aaKnown RBP17.35■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Gm28919A0A087WP35 240 aa17.35■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Ehbp1Q69ZW3 1231 aa17.35■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Ifih1Q8R5F7 1025 aa17.35■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Mei1Q9D4I2 1268 aa17.35■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Fbxo3Q9DC63 480 aa17.35■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Dpf1Q9QX66 387 aa17.35■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Ovgp1Q62010 721 aa17.35■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Cabp7Q91ZM8 215 aa17.35■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Six6os1Q9CTN5 574 aa17.35■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Vmn2r68L7N2B3 851 aa17.34■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 PsdQ5DTT2 1024 aa17.34■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Tas2r124Q7M718 309 aa17.34■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Prpf40bQ80W14 870 aa17.34■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Ctnnbl1Q9CWL8 563 aaKnown RBP17.34■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 4930548H24RikQ9D496 437 aa17.34■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Dusp10Q9ESS0 483 aa17.34■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 1700018F24RikB2RW27 314 aa17.34■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Zfp91Q62511 572 aa17.34■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Gpcpd1Q8C0L9 675 aa17.34■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Mknk2Q8CDB0 459 aa17.34■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Shtn1Q8K2Q9 631 aa17.34■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Apol10bG3X9K7 334 aa17.34■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Mnat1P51949 309 aa17.34■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Hps6Q8BLY7 805 aa17.34■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Cnpy3Q9DAU1 276 aa17.34■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Gm4758L7N258 96 aa17.33■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Etf1Q8BWY3 437 aaKnown RBP17.33■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Apol10aQ8CCA5 318 aa17.33■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Ints5Q8CHT3 1018 aa17.33■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 NapgQ9CWZ7 312 aa17.33■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 GdaQ9R111 454 aa17.33■□□□□ 0.37
Ccdc88b-201ENSMUST00000113440 Ppp2r2cQ8BG02 447 aa17.33■□□□□ 0.36
Ccdc88b-201ENSMUST00000113440 Wdr3Q8BHB4 942 aaKnown RBP17.33■□□□□ 0.36
Ccdc88b-201ENSMUST00000113440 Ifi35Q9D8C4 286 aa17.33■□□□□ 0.36
Ccdc88b-201ENSMUST00000113440 Slc4a1P04919 929 aa17.33■□□□□ 0.36
Ccdc88b-201ENSMUST00000113440 Opa1P58281 960 aa17.33■□□□□ 0.36
Ccdc88b-201ENSMUST00000113440 Pdrg1P59048 133 aa17.33■□□□□ 0.36
Ccdc88b-201ENSMUST00000113440 Dcaf17Q3TUL7 519 aa17.33■□□□□ 0.36
Ccdc88b-201ENSMUST00000113440 AcrbpQ3V140 540 aa17.33■□□□□ 0.36
Ccdc88b-201ENSMUST00000113440 Rhpn1Q61085 643 aa17.33■□□□□ 0.36
Ccdc88b-201ENSMUST00000113440 Arfgap2Q99K28 520 aa17.33■□□□□ 0.36
Ccdc88b-201ENSMUST00000113440 Trmt44Q9D2Q2 713 aa17.32■□□□□ 0.36
Ccdc88b-201ENSMUST00000113440 Gm28510A0A087WP28 240 aa17.32■□□□□ 0.36
Ccdc88b-201ENSMUST00000113440 Otud7bB2RUR8 840 aa17.32■□□□□ 0.36
Ccdc88b-201ENSMUST00000113440 Rexo1Q7TT28 1213 aa17.32■□□□□ 0.36
Ccdc88b-201ENSMUST00000113440 Abcb6Q9DC29 842 aa17.32■□□□□ 0.36
Ccdc88b-201ENSMUST00000113440 Btn2a2A4QPC6 514 aa17.32■□□□□ 0.36
Ccdc88b-201ENSMUST00000113440 ByslO54825 436 aaKnown RBP17.32■□□□□ 0.36
Ccdc88b-201ENSMUST00000113440 EmbP21995 330 aa17.32■□□□□ 0.36
Ccdc88b-201ENSMUST00000113440 Spata24Q6P926 205 aa17.32■□□□□ 0.36
Ccdc88b-201ENSMUST00000113440 Dnm3Q8BZ98 863 aa17.32■□□□□ 0.36
Ccdc88b-201ENSMUST00000113440 Ces1dQ8VCT4 565 aa17.32■□□□□ 0.36
Ccdc88b-201ENSMUST00000113440 Mst1rQ62190 1378 aa17.32■□□□□ 0.36
Ccdc88b-201ENSMUST00000113440 Slc38a10Q5I012 1090 aa17.32■□□□□ 0.36
Ccdc88b-201ENSMUST00000113440 Kiaa1524Q8BWY9 907 aa17.32■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms