RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Alppl2P24823 529 aa24.51■■□□□ 1.51
Ccdc88a-202ENSMUST00000109477 Acnat2Q8BGG9 420 aa24.51■■□□□ 1.51
Ccdc88a-202ENSMUST00000109477 Triml1Q8BVP1 470 aa24.51■■□□□ 1.51
Ccdc88a-202ENSMUST00000109477 Prpf3Q922U1 683 aaKnown RBP24.51■■□□□ 1.51
Ccdc88a-202ENSMUST00000109477 Lonrf3Q9D4H7 753 aa24.51■■□□□ 1.51
Ccdc88a-202ENSMUST00000109477 Dnm1P39053 867 aa24.5■■□□□ 1.51
Ccdc88a-202ENSMUST00000109477 CgnP59242 1191 aa24.5■■□□□ 1.51
Ccdc88a-202ENSMUST00000109477 Irf6P97431 467 aa24.5■■□□□ 1.51
Ccdc88a-202ENSMUST00000109477 Tbc1d9bQ5SVR0 1263 aa24.5■■□□□ 1.51
Ccdc88a-202ENSMUST00000109477 Srek1Q8BZX4 494 aaKnown RBP24.5■■□□□ 1.51
Ccdc88a-202ENSMUST00000109477 Trmt112Q9DCG9 125 aa24.5■■□□□ 1.51
Ccdc88a-202ENSMUST00000109477 A0A1Y7VML8 143 aa24.49■■□□□ 1.51
Ccdc88a-202ENSMUST00000109477 Zbtb21E9Q444 1094 aa24.49■■□□□ 1.51
Ccdc88a-202ENSMUST00000109477 Cd22P35329 862 aa24.49■■□□□ 1.51
Ccdc88a-202ENSMUST00000109477 Ube2hP62257 183 aa24.49■■□□□ 1.51
Ccdc88a-202ENSMUST00000109477 Ppp1r11Q8K1L5 131 aa24.49■■□□□ 1.51
Ccdc88a-202ENSMUST00000109477 Mtmr4Q91XS1 1190 aa24.49■■□□□ 1.51
Ccdc88a-202ENSMUST00000109477 Ccng2O08918 344 aa24.49■■□□□ 1.51
Ccdc88a-202ENSMUST00000109477 Mtmr3Q8K296 1196 aa24.49■■□□□ 1.51
Ccdc88a-202ENSMUST00000109477 Prss51A0A286YDY8 319 aa24.48■■□□□ 1.51
Ccdc88a-202ENSMUST00000109477 GnaqP21279 359 aa24.48■■□□□ 1.51
Ccdc88a-202ENSMUST00000109477 Cplx1P63040 134 aa24.48■■□□□ 1.51
Ccdc88a-202ENSMUST00000109477 Ift74Q8BKE9 600 aa24.48■■□□□ 1.51
Ccdc88a-202ENSMUST00000109477 Mex3cQ05A36 652 aaKnown RBP24.47■■□□□ 1.51
Ccdc88a-202ENSMUST00000109477 Tspoap1Q7TNF8 1846 aa24.47■■□□□ 1.51
Ccdc88a-202ENSMUST00000109477 Ncf1Q09014 390 aa24.47■■□□□ 1.51
Ccdc88a-202ENSMUST00000109477 Glra4Q61603 456 aa24.47■■□□□ 1.51
Ccdc88a-202ENSMUST00000109477 Fam196bQ6GQV1 535 aa24.47■■□□□ 1.51
Ccdc88a-202ENSMUST00000109477 Nup88Q8CEC0 753 aaKnown RBP24.47■■□□□ 1.51
Ccdc88a-202ENSMUST00000109477 Nop2Q922K7 793 aaKnown RBP24.47■■□□□ 1.51
Ccdc88a-202ENSMUST00000109477 Fzd9Q9R216 592 aa24.47■■□□□ 1.51
Ccdc88a-202ENSMUST00000109477 Gpaa1Q9WTK3 621 aa24.47■■□□□ 1.51
Ccdc88a-202ENSMUST00000109477 Cacna1fQ9JIS7 1985 aa24.46■■□□□ 1.51
Ccdc88a-202ENSMUST00000109477 A430078G23RikE9Q7Y4 484 aa24.46■■□□□ 1.51
Ccdc88a-202ENSMUST00000109477 Spryd3E9Q9B3 442 aa24.46■■□□□ 1.51
Ccdc88a-202ENSMUST00000109477 Stag2O35638 1231 aa24.46■■□□□ 1.51
Ccdc88a-202ENSMUST00000109477 Mybl2P48972 704 aa24.46■■□□□ 1.51
Ccdc88a-202ENSMUST00000109477 Slc27a1Q60714 646 aa24.46■■□□□ 1.51
Ccdc88a-202ENSMUST00000109477 Tmx3Q8BXZ1 456 aa24.46■■□□□ 1.51
Ccdc88a-202ENSMUST00000109477 Mei1Q9D4I2 1268 aa24.46■■□□□ 1.51
Ccdc88a-202ENSMUST00000109477 Ccdc88aQ5SNZ0 1873 aa24.46■■□□□ 1.51
Ccdc88a-202ENSMUST00000109477 Gtpbp6Q3U6U5 514 aa24.45■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Ttll1Q91V51 423 aa24.45■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Tob2Q9JM55 345 aa24.45■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 SisF8VQM5 1818 aa24.45■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Slc4a9E9PUP3 929 aa24.44■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Cyp3a25O09158 503 aa24.44■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 LdhaP06151 332 aaKnown RBP24.44■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 WaplQ65Z40 1200 aaKnown RBP24.44■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Kcnj14Q8JZN3 434 aa24.44■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Myh14Q6URW6 2000 aa24.44■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 U2af2P26369 475 aaKnown RBP24.44■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Nap1l2P51860 460 aa24.44■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Klrg2Q3UM83 387 aa24.44■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Sez6lQ6P1D5 963 aa24.44■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Lzts2Q91YU6 671 aa24.44■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Gbp7Q91Z40 638 aa24.44■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 SmapQ9R0P4 181 aaKnown RBP24.44■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Nova2D3YVV7 556 aaKnown RBP24.43■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Lca5Q80ST9 704 aa24.43■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Tmem39bQ810L4 492 aa24.43■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Igf2bp3Q9CPN8 579 aaKnown RBP24.43■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Tjap1Q9DCD5 539 aa24.43■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Polr2aP08775 1970 aaKnown RBP24.43■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Lnx1O70263 728 aa24.42■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Gm28047Q3US59 414 aa24.42■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 MycbpapQ5SUV2 932 aa24.42■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Tomm22Q9CPQ3 142 aa24.42■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Med4Q9CQA5 270 aa24.42■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Pitpnm2Q6ZPQ6 1335 aa24.42■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Trpm7Q923J1 1863 aa24.42■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Pfkfb3A7UAK5 555 aa24.41■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Q3UJP5 209 aa24.41■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Armc2Q3URY6 854 aa24.41■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Usp28Q5I043 1051 aa24.41■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Tmprss11eQ5S248 423 aa24.41■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Psen2Q61144 448 aa24.41■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Ces3aQ63880 571 aa24.41■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Zbtb39Q6PDK0 712 aa24.41■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Gtf3c5Q8R2T8 520 aa24.41■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Ces3bQ8VCU1 571 aa24.41■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 PdgfdQ925I7 370 aa24.41■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Ppef2O35385 757 aa24.41■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Myo19Q5SV80 963 aa24.41■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Brip1Q5SXJ3 1174 aa24.41■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Exoc8Q6PGF7 716 aa24.41■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Vps37dQ810I0 261 aa24.41■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Apbb1ipQ8R5A3 670 aa24.41■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Kif4P33174 1231 aa24.4■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Qrich1Q3UA37 777 aa24.4■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Lgr6Q3UVD5 967 aa24.4■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Mdh1bQ5F204 500 aa24.4■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Nsrp1Q5NCR9 542 aa24.4■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Prkag3Q8BGM7 489 aa24.4■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 RadxQ8C779 850 aa24.4■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Angel2Q8K1C0 544 aa24.4■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Rbm19Q8R3C6 952 aaKnown RBP24.4■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Ndufa8Q9DCJ5 172 aa24.4■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Ccdc112A0AUP1 442 aa24.39■■□□□ 1.5
Ccdc88a-202ENSMUST00000109477 Gm9992B2RWK3 458 aa24.39■■□□□ 1.5
Retrieved 100 of 22,080 RNA–protein pairs in 11.4 ms