RNA–Protein interactions for RNA: ENSMUST00000108809.7

Trim11-202, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-202ENSMUST00000108809 1700018B08RikQ9DA83 213 aa13.18□□□□□ -0.3
Trim11-202ENSMUST00000108809 ParvgQ9ERD8 331 aa13.18□□□□□ -0.3
Trim11-202ENSMUST00000108809 Irs4Q9Z0Y7 1216 aa13.18□□□□□ -0.3
Trim11-202ENSMUST00000108809 Calm1P0DP26 149 aaKnown RBP13.17□□□□□ -0.3
Trim11-202ENSMUST00000108809 Calm2P0DP27 149 aaKnown RBP13.17□□□□□ -0.3
Trim11-202ENSMUST00000108809 Calm3P0DP28 149 aaKnown RBP13.17□□□□□ -0.3
Trim11-202ENSMUST00000108809 Zc3h12cQ5DTV4 884 aa13.17□□□□□ -0.3
Trim11-202ENSMUST00000108809 Adam6bQ6IMH7 756 aa13.17□□□□□ -0.3
Trim11-202ENSMUST00000108809 Sf3b3Q921M3 1217 aaKnown RBP13.17□□□□□ -0.3
Trim11-202ENSMUST00000108809 Calml3Q9D6P8 149 aa13.17□□□□□ -0.3
Trim11-202ENSMUST00000108809 NgdnQ9DB96 315 aaKnown RBP13.17□□□□□ -0.3
Trim11-202ENSMUST00000108809 Traf1P39428 409 aa13.17□□□□□ -0.3
Trim11-202ENSMUST00000108809 Hdac4Q6NZM9 1076 aa13.17□□□□□ -0.3
Trim11-202ENSMUST00000108809 Nop9Q8BMC4 636 aaKnown RBP13.17□□□□□ -0.3
Trim11-202ENSMUST00000108809 Scrn1Q9CZC8 414 aa13.17□□□□□ -0.3
Trim11-202ENSMUST00000108809 Myo1hQ9D6A1 958 aa13.17□□□□□ -0.3
Trim11-202ENSMUST00000108809 Foxo3Q9WVH4 672 aa13.17□□□□□ -0.3
Trim11-202ENSMUST00000108809 Mapk8ip1Q9WVI9 707 aa13.17□□□□□ -0.3
Trim11-202ENSMUST00000108809 Duox1A2AQ92 1551 aa13.17□□□□□ -0.3
Trim11-202ENSMUST00000108809 Scgb2b18A0A087WPA9 112 aa13.17□□□□□ -0.3
Trim11-202ENSMUST00000108809 PnnO35691 725 aaKnown RBP13.17□□□□□ -0.3
Trim11-202ENSMUST00000108809 Trim25Q61510 634 aaKnown RBP13.17□□□□□ -0.3
Trim11-202ENSMUST00000108809 Necab1Q8BG18 352 aa13.17□□□□□ -0.3
Trim11-202ENSMUST00000108809 Pla2g12bQ99P27 195 aa13.17□□□□□ -0.3
Trim11-202ENSMUST00000108809 Mfap3lQ9D3X9 409 aa13.17□□□□□ -0.3
Trim11-202ENSMUST00000108809 Adgra3Q7TT36 1310 aa13.16□□□□□ -0.3
Trim11-202ENSMUST00000108809 Nmt2O70311 529 aa13.16□□□□□ -0.3
Trim11-202ENSMUST00000108809 Rad23bP54728 416 aa13.16□□□□□ -0.3
Trim11-202ENSMUST00000108809 Irx2P81066 474 aa13.16□□□□□ -0.3
Trim11-202ENSMUST00000108809 Olfr121Q5CZY0 321 aa13.16□□□□□ -0.3
Trim11-202ENSMUST00000108809 Znf526Q8BI66 675 aa13.16□□□□□ -0.3
Trim11-202ENSMUST00000108809 Rbm28Q8CGC6 750 aaKnown RBP13.16□□□□□ -0.3
Trim11-202ENSMUST00000108809 Txndc5Q91W90 417 aa13.16□□□□□ -0.3
Trim11-202ENSMUST00000108809 Pcdha7Q91Y13 937 aa13.16□□□□□ -0.3
Trim11-202ENSMUST00000108809 Sgpp1Q9JI99 430 aa13.16□□□□□ -0.3
Trim11-202ENSMUST00000108809 NefhP19246 1090 aa13.16□□□□□ -0.3
Trim11-202ENSMUST00000108809 Mars2Q499X9 586 aaKnown RBP13.16□□□□□ -0.3
Trim11-202ENSMUST00000108809 Ccdc88aQ5SNZ0 1873 aa13.16□□□□□ -0.3
Trim11-202ENSMUST00000108809 Fez2Q6TYB5 348 aa13.16□□□□□ -0.3
Trim11-202ENSMUST00000108809 Nod2Q8K3Z0 1020 aa13.16□□□□□ -0.3
Trim11-202ENSMUST00000108809 Brms1Q99N20 246 aa13.16□□□□□ -0.3
Trim11-202ENSMUST00000108809 CpvlQ9D3S9 478 aa13.16□□□□□ -0.3
Trim11-202ENSMUST00000108809 Cyp2j7A0A140T8U1 504 aa13.16□□□□□ -0.3
Trim11-202ENSMUST00000108809 Abl1P00520 1123 aa13.16□□□□□ -0.3
Trim11-202ENSMUST00000108809 Tshz1Q5DTH5 1084 aa13.16□□□□□ -0.3
Trim11-202ENSMUST00000108809 Sun3Q5SS91 320 aa13.16□□□□□ -0.3
Trim11-202ENSMUST00000108809 Tpm4Q6IRU2 248 aa13.16□□□□□ -0.3
Trim11-202ENSMUST00000108809 Rassf4Q8CB96 322 aa13.16□□□□□ -0.3
Trim11-202ENSMUST00000108809 Tube1Q9D6T1 475 aa13.16□□□□□ -0.3
Trim11-202ENSMUST00000108809 TbcaP48428 108 aaKnown RBP13.15□□□□□ -0.3
Trim11-202ENSMUST00000108809 Mcm6P97311 821 aa13.15□□□□□ -0.3
Trim11-202ENSMUST00000108809 IntuQ059U7 942 aa13.15□□□□□ -0.3
Trim11-202ENSMUST00000108809 Gucy2cQ3UWA6 1072 aa13.15□□□□□ -0.3
Trim11-202ENSMUST00000108809 Tmtc2Q56A06 836 aa13.15□□□□□ -0.3
Trim11-202ENSMUST00000108809 Hspa4Q61316 841 aa13.15□□□□□ -0.3
Trim11-202ENSMUST00000108809 Nat10Q8K224 1024 aaKnown RBP13.15□□□□□ -0.3
Trim11-202ENSMUST00000108809 Traf3ip1Q149C2 625 aa13.15□□□□□ -0.3
Trim11-202ENSMUST00000108809 Cnnm4Q69ZF7 771 aa13.15□□□□□ -0.3
Trim11-202ENSMUST00000108809 Fchsd1Q6PFY1 688 aa13.15□□□□□ -0.3
Trim11-202ENSMUST00000108809 Smarca1Q6PGB8 1046 aa13.15□□□□□ -0.3
Trim11-202ENSMUST00000108809 Phf20l1Q8CCJ9 1013 aa13.15□□□□□ -0.3
Trim11-202ENSMUST00000108809 Stn1Q8K2X3 378 aa13.15□□□□□ -0.3
Trim11-202ENSMUST00000108809 Pcdhgc5Q91XW9 944 aa13.15□□□□□ -0.3
Trim11-202ENSMUST00000108809 Rbm33Q9CXK9 1231 aaKnown RBP13.15□□□□□ -0.3
Trim11-202ENSMUST00000108809 Dpf1Q9QX66 387 aa13.15□□□□□ -0.3
Trim11-202ENSMUST00000108809 Gja10Q9WUS4 505 aa13.15□□□□□ -0.3
Trim11-202ENSMUST00000108809 GpiP06745 558 aaKnown RBP13.14□□□□□ -0.31
Trim11-202ENSMUST00000108809 Cdh15P33146 784 aa13.14□□□□□ -0.31
Trim11-202ENSMUST00000108809 Mrps31Q61733 384 aaKnown RBP13.14□□□□□ -0.31
Trim11-202ENSMUST00000108809 Gimap5Q8BWF2 308 aa13.14□□□□□ -0.31
Trim11-202ENSMUST00000108809 Pfkfb3A7UAK5 555 aa13.14□□□□□ -0.31
Trim11-202ENSMUST00000108809 Stox1B2RQL2 990 aa13.14□□□□□ -0.31
Trim11-202ENSMUST00000108809 Serpina16D3Z660 418 aa13.14□□□□□ -0.31
Trim11-202ENSMUST00000108809 Mapkapk5O54992 473 aa13.14□□□□□ -0.31
Trim11-202ENSMUST00000108809 Trappc10Q3TLI0 1259 aa13.14□□□□□ -0.31
Trim11-202ENSMUST00000108809 RbsnQ80Y56 783 aa13.14□□□□□ -0.31
Trim11-202ENSMUST00000108809 Wdr3Q8BHB4 942 aaKnown RBP13.14□□□□□ -0.31
Trim11-202ENSMUST00000108809 AllcQ9JHX6 414 aa13.14□□□□□ -0.31
Trim11-202ENSMUST00000108809 Ybx3Q9JKB3 361 aaKnown RBP13.14□□□□□ -0.31
Trim11-202ENSMUST00000108809 Abhd2Q9QXM0 425 aa13.14□□□□□ -0.31
Trim11-202ENSMUST00000108809 CltaO08585 235 aa13.14□□□□□ -0.31
Trim11-202ENSMUST00000108809 MarcksP26645 309 aaKnown RBP13.14□□□□□ -0.31
Trim11-202ENSMUST00000108809 Rad23aP54726 363 aa13.14□□□□□ -0.31
Trim11-202ENSMUST00000108809 Eif5P59325 429 aaKnown RBP13.14□□□□□ -0.31
Trim11-202ENSMUST00000108809 1700013D24RikQ0P521 120 aa13.14□□□□□ -0.31
Trim11-202ENSMUST00000108809 Ehmt1Q5DW34 1296 aa13.14□□□□□ -0.31
Trim11-202ENSMUST00000108809 MycbpapQ5SUV2 932 aa13.14□□□□□ -0.31
Trim11-202ENSMUST00000108809 Cfap45Q9D9U9 551 aa13.14□□□□□ -0.31
Trim11-202ENSMUST00000108809 Cyp26c1B2RXA7 518 aa13.13□□□□□ -0.31
Trim11-202ENSMUST00000108809 Zfand4D3Z3C6 739 aa13.13□□□□□ -0.31
Trim11-202ENSMUST00000108809 Gucy1a2F8VQK3 730 aa13.13□□□□□ -0.31
Trim11-202ENSMUST00000108809 Lamb3Q61087 1168 aa13.13□□□□□ -0.31
Trim11-202ENSMUST00000108809 Fam161bQ8CB59 589 aa13.13□□□□□ -0.31
Trim11-202ENSMUST00000108809 Apol10aQ8CCA5 318 aa13.13□□□□□ -0.31
Trim11-202ENSMUST00000108809 McamQ8R2Y2 648 aaKnown RBP13.13□□□□□ -0.31
Trim11-202ENSMUST00000108809 Ppp1r21Q3TDD9 780 aa13.13□□□□□ -0.31
Trim11-202ENSMUST00000108809 Ddb1Q3U1J4 1140 aaKnown RBP13.13□□□□□ -0.31
Trim11-202ENSMUST00000108809 Triml1Q8BVP1 470 aa13.13□□□□□ -0.31
Trim11-202ENSMUST00000108809 Tcp11l2Q8K1H7 517 aa13.13□□□□□ -0.31
Trim11-202ENSMUST00000108809 Klc3Q91W40 508 aa13.13□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 12.6 ms