RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Rbm26Q6NZN0 1012 aaKnown RBP12.92□□□□□ -0.34
Ddx55-201ENSMUST00000071057 Znf653Q6YND2 615 aa12.92□□□□□ -0.34
Ddx55-201ENSMUST00000071057 Tsen34Q8BMZ5 316 aa12.92□□□□□ -0.34
Ddx55-201ENSMUST00000071057 Rec8Q8C5S7 591 aa12.92□□□□□ -0.34
Ddx55-201ENSMUST00000071057 Nrbp1Q99J45 535 aa12.92□□□□□ -0.34
Ddx55-201ENSMUST00000071057 Hmgn5Q9JL35 406 aa12.92□□□□□ -0.34
Ddx55-201ENSMUST00000071057 A0A1Y7VML8 143 aa12.91□□□□□ -0.34
Ddx55-201ENSMUST00000071057 Cspp1B2RX88 1205 aa12.91□□□□□ -0.34
Ddx55-201ENSMUST00000071057 Usp50Q6P8X6 390 aa12.91□□□□□ -0.34
Ddx55-201ENSMUST00000071057 Kcnf1Q7TSH7 493 aa12.91□□□□□ -0.34
Ddx55-201ENSMUST00000071057 Gm36210A0A1B0GS00 229 aa12.91□□□□□ -0.34
Ddx55-201ENSMUST00000071057 Zscan20B2KFW1 1030 aa12.91□□□□□ -0.34
Ddx55-201ENSMUST00000071057 Myo1bP46735 1107 aa12.91□□□□□ -0.34
Ddx55-201ENSMUST00000071057 Prpf4bQ61136 1007 aaKnown RBP12.91□□□□□ -0.34
Ddx55-201ENSMUST00000071057 Pcdhb14Q6PB90 796 aa12.91□□□□□ -0.34
Ddx55-201ENSMUST00000071057 Ttll4Q80UG8 1193 aa12.91□□□□□ -0.34
Ddx55-201ENSMUST00000071057 Adck5Q80V03 582 aa12.91□□□□□ -0.34
Ddx55-201ENSMUST00000071057 Tbc1d5Q80XQ2 815 aa12.91□□□□□ -0.34
Ddx55-201ENSMUST00000071057 Syt10Q9R0N4 523 aa12.91□□□□□ -0.34
Ddx55-201ENSMUST00000071057 Heg1E9Q7X6 1337 aa12.91□□□□□ -0.34
Ddx55-201ENSMUST00000071057 Rbbp6P97868 1790 aaKnown RBP12.9□□□□□ -0.34
Ddx55-201ENSMUST00000071057 Arfgef1G3X9K3 1846 aaKnown RBP12.9□□□□□ -0.34
Ddx55-201ENSMUST00000071057 Tpd52l1O54818 204 aa12.9□□□□□ -0.34
Ddx55-201ENSMUST00000071057 Dync1i1O88485 628 aa12.9□□□□□ -0.34
Ddx55-201ENSMUST00000071057 Stx8O88983 236 aa12.9□□□□□ -0.34
Ddx55-201ENSMUST00000071057 CebpzP53569 1052 aaKnown RBP12.9□□□□□ -0.34
Ddx55-201ENSMUST00000071057 Mcm6P97311 821 aa12.9□□□□□ -0.34
Ddx55-201ENSMUST00000071057 1700013D24RikQ0P521 120 aa12.9□□□□□ -0.34
Ddx55-201ENSMUST00000071057 Klra9Q2TJJ8 266 aa12.9□□□□□ -0.34
Ddx55-201ENSMUST00000071057 Hdgfl1Q2VPR5 283 aa12.9□□□□□ -0.34
Ddx55-201ENSMUST00000071057 Ano6Q6P9J9 911 aa12.9□□□□□ -0.34
Ddx55-201ENSMUST00000071057 Oxsr1Q6P9R2 527 aa12.9□□□□□ -0.34
Ddx55-201ENSMUST00000071057 Myl6bQ8CI43 207 aa12.9□□□□□ -0.34
Ddx55-201ENSMUST00000071057 Evc2Q8K1G2 1220 aa12.9□□□□□ -0.34
Ddx55-201ENSMUST00000071057 Wasf1Q8R5H6 559 aa12.9□□□□□ -0.34
Ddx55-201ENSMUST00000071057 Klra10Q9R1G6 266 aa12.9□□□□□ -0.34
Ddx55-201ENSMUST00000071057 Slfn1Q9Z0I7 337 aa12.9□□□□□ -0.34
Ddx55-201ENSMUST00000071057 Tbc1d8bA3KGB4 1114 aa12.9□□□□□ -0.34
Ddx55-201ENSMUST00000071057 Usp53P15975 1069 aa12.9□□□□□ -0.34
Ddx55-201ENSMUST00000071057 XpcP51612 930 aa12.9□□□□□ -0.34
Ddx55-201ENSMUST00000071057 Ccdc85aQ5SP85 500 aa12.9□□□□□ -0.34
Ddx55-201ENSMUST00000071057 Slc27a1Q60714 646 aa12.9□□□□□ -0.34
Ddx55-201ENSMUST00000071057 Nop2Q922K7 793 aaKnown RBP12.9□□□□□ -0.34
Ddx55-201ENSMUST00000071057 NenfQ9CQ45 171 aa12.9□□□□□ -0.34
Ddx55-201ENSMUST00000071057 Myh13B1AR69 1938 aa12.9□□□□□ -0.34
Ddx55-201ENSMUST00000071057 Myo3bQ1EG27 1305 aa12.9□□□□□ -0.34
Ddx55-201ENSMUST00000071057 Slc1a4O35874 532 aa12.89□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Grin1P35438 938 aa12.89□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Aak1Q3UHJ0 959 aa12.89□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Spg7Q3ULF4 781 aa12.89□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Prl2c1Q5SVL9 228 aa12.89□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Phf20l1Q8CCJ9 1013 aa12.89□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Gtpbp10Q8K013 366 aa12.89□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Rbm19Q8R3C6 952 aaKnown RBP12.89□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Dynll2Q9D0M5 89 aa12.89□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Stxbp4Q9WV89 557 aa12.89□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Large1Q9Z1M7 756 aa12.89□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Atp6v1aP50516 617 aaKnown RBP12.89□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Inf2Q0GNC1 1273 aa12.89□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Haus7Q8BKT8 364 aa12.89□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Stn1Q8K2X3 378 aa12.89□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Luzp1Q8R4U7 1068 aaKnown RBP12.89□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Slc44a4Q91VA1 707 aa12.89□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Pla2g12bQ99P27 195 aa12.89□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Mrpl12Q9DB15 201 aaKnown RBP12.89□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Rcan1Q9JHG6 198 aa12.89□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Epb41l3Q9WV92 929 aa12.89□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Gm3893E9Q1I1 302 aa12.88□□□□□ -0.35
Ddx55-201ENSMUST00000071057 PcQ05920 1178 aa12.88□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Fam89aQ14BJ1 175 aa12.88□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Msl1Q6PDM1 616 aa12.88□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Dhx40Q6PE54 779 aaKnown RBP12.88□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Strip1Q8C079 837 aa12.88□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Rai14Q9EP71 979 aaKnown RBP12.88□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Atp1a4Q9WV27 1032 aa12.88□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Ltn1Q6A009 1767 aa12.88□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Pnpla6Q3TRM4 1355 aa12.88□□□□□ -0.35
Ddx55-201ENSMUST00000071057 1700018F24RikB2RW27 314 aa12.88□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Zfp213E9QAW0 468 aa12.88□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Gtf2f1Q3THK3 508 aaKnown RBP12.88□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Tmem179Q8BHH9 233 aa12.88□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Q8BZJ8 459 aa12.88□□□□□ -0.35
Ddx55-201ENSMUST00000071057 TraipQ8VIG6 470 aa12.88□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Trim11Q99PQ2 467 aa12.88□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Col11a2Q64739 1736 aa12.87□□□□□ -0.35
Ddx55-201ENSMUST00000071057 1810065E05RikQ5NC41 235 aa12.87□□□□□ -0.35
Ddx55-201ENSMUST00000071057 MycbpapQ5SUV2 932 aa12.87□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Ccp110Q7TSH4 1004 aa12.87□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Pramel6Q810Y9 485 aa12.87□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Triml1Q8BVP1 470 aa12.87□□□□□ -0.35
Ddx55-201ENSMUST00000071057 St5Q924W7 1134 aa12.87□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Wdr64Q9D565 1086 aa12.87□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Znf568E9PYI1 671 aa12.87□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Gm10134F6ZQC6 126 aa12.87□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Dapk3O54784 448 aa12.87□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Dok7Q18PE0 504 aa12.87□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Cyp4x1Q6A152 507 aa12.87□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Tekt3Q6X6Z7 490 aa12.87□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Nop14Q8R3N1 860 aaKnown RBP12.87□□□□□ -0.35
Ddx55-201ENSMUST00000071057 Ndufb9Q9CQJ8 179 aa12.87□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 44.5 ms