RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Brd3Q8K2F0 726 aaKnown RBP18.21■□□□□ 0.51
Ckap4-201ENSMUST00000053871 Trim29Q8R2Q0 587 aa18.21■□□□□ 0.51
Ckap4-201ENSMUST00000053871 Prpf3Q922U1 683 aaKnown RBP18.21■□□□□ 0.51
Ckap4-201ENSMUST00000053871 1700018B08RikQ9DA83 213 aa18.21■□□□□ 0.51
Ckap4-201ENSMUST00000053871 Lama4P97927 1816 aa18.21■□□□□ 0.51
Ckap4-201ENSMUST00000053871 Cyp26c1B2RXA7 518 aa18.2■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Tlr8P58682 1032 aa18.2■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Cep128Q8BI22 1102 aa18.2■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Tgs1Q923W1 853 aa18.2■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Myh7bA2AQP0 1941 aa18.2■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Palm3A2TJV2 734 aa18.2■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Adssl1P28650 457 aa18.2■□□□□ 0.5
Ckap4-201ENSMUST00000053871 RragbQ6NTA4 374 aa18.2■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Enox1Q8BHR2 643 aaKnown RBP18.2■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Rcan1Q9JHG6 198 aa18.2■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Mast2Q60592 1734 aa18.2■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Casz1Q9CWL2 1761 aa18.19■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Mcm6P97311 821 aa18.19■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Lrrc15Q80X72 579 aa18.19■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Adarb2Q9JI20 745 aa18.19■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Ercc4Q9QZD4 917 aa18.19■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Nfil3O08750 462 aa18.19■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Rtkn2Q14B46 604 aa18.19■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Gm5592Q3V0A6 857 aa18.19■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Mars2Q499X9 586 aaKnown RBP18.19■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Pramel6Q810Y9 485 aa18.19■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Vps53Q8CCB4 832 aa18.19■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Hexim1Q8R409 356 aaKnown RBP18.19■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Sf3b3Q921M3 1217 aaKnown RBP18.19■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Npy5rO70342 466 aa18.19■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Ptpn12P35831 775 aa18.19■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Kiaa1468Q148V7 1216 aa18.19■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Mns1Q61884 491 aa18.19■□□□□ 0.5
Ckap4-201ENSMUST00000053871 DlatQ8BMF4 642 aa18.19■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Krt82Q99M74 516 aa18.19■□□□□ 0.5
Ckap4-201ENSMUST00000053871 EvplQ9D952 2035 aa18.19■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Sgpp1Q9JI99 430 aa18.19■□□□□ 0.5
Ckap4-201ENSMUST00000053871 AfdnQ9QZQ1 1820 aaKnown RBP18.19■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Brwd3A2AHJ4 1799 aa18.18■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Adgra3Q7TT36 1310 aa18.18■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Adck5Q80V03 582 aa18.18■□□□□ 0.5
Ckap4-201ENSMUST00000053871 HmcesQ8R1M0 353 aaKnown RBP18.18■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Ccdc121E9Q6D3 323 aa18.18■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Api5O35841 504 aaKnown RBP18.18■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Cdh15P33146 784 aa18.18■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Pnpla2Q8BJ56 486 aa18.18■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Fam76aQ922G2 307 aa18.18■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Mis18aQ9CZJ6 204 aa18.18■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Homer1Q9Z2Y3 366 aa18.18■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Cfap44E9Q5M6 1843 aa18.18■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Tom1O88746 492 aa18.17■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Ftl1P29391 183 aa18.17■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Rasgrp4Q8BTM9 673 aa18.17■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Ddx41Q91VN6 622 aaKnown RBP18.17■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Tc2nQ91XT6 489 aa18.17■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Ndufv1Q91YT0 464 aa18.17■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Myo1hQ9D6A1 958 aa18.17■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Zkscan5Q9Z1D8 819 aa18.17■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Lrp5Q91VN0 1614 aa18.17■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Dhx8A2A4P0 1244 aaKnown RBP18.17■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Cyb5rlB1AS42 316 aa18.17■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Lrrc43Q3V0L5 667 aa18.17■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Spag5Q7TME2 1165 aa18.17■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Akr1c19G3X9Y6 323 aa18.17■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Myh4Q5SX39 1939 aa18.16■□□□□ 0.5
Ckap4-201ENSMUST00000053871 GakQ99KY4 1305 aa18.16■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Ppef2O35385 757 aa18.16■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Sox5P35710 763 aa18.16■□□□□ 0.5
Ckap4-201ENSMUST00000053871 RadxQ8C779 850 aa18.16■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Ccdc12Q8R344 166 aaKnown RBP18.16■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Pcdha7Q91Y13 937 aa18.16■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Creld2Q9CYA0 350 aa18.16■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Map3k15A2AQW0 1331 aa18.16■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Calm1P0DP26 149 aaKnown RBP18.16■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Calm2P0DP27 149 aaKnown RBP18.16■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Calm3P0DP28 149 aaKnown RBP18.16■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Il15P48346 162 aa18.16■□□□□ 0.5
Ckap4-201ENSMUST00000053871 NfixP70257 488 aa18.16■□□□□ 0.5
Ckap4-201ENSMUST00000053871 PcQ05920 1178 aa18.16■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Maats1Q8BRC6 783 aa18.16■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Arpp21Q9DCB4 807 aa18.16■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Eif4enif1Q9EST3 983 aaKnown RBP18.16■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Vstm4T1NXB5 319 aa18.16■□□□□ 0.5
Ckap4-201ENSMUST00000053871 A0A1L1SQF0 893 aa18.15■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Tbc1d2B1AVH7 922 aa18.15■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Ugt1a8D3Z748 530 aa18.15■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Ugt1a10E9PXN7 530 aa18.15■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Serpinb6bO08804 377 aa18.15■□□□□ 0.5
Ckap4-201ENSMUST00000053871 EmbP21995 330 aa18.15■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Nab2Q61127 525 aa18.15■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Arid3aQ62431 601 aa18.15■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Wdr3Q8BHB4 942 aaKnown RBP18.15■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Anks1bQ8BIZ1 1259 aa18.15■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Ano2Q8CFW1 1002 aa18.15■□□□□ 0.5
Ckap4-201ENSMUST00000053871 LpxnQ99N69 386 aa18.15■□□□□ 0.5
Ckap4-201ENSMUST00000053871 ChmQ9QXG2 665 aa18.15■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Aox3G3X982 1335 aa18.15■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Prr29B1ARI9 187 aa18.15■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Apol7aB2RT54 418 aa18.15■□□□□ 0.5
Ckap4-201ENSMUST00000053871 Txndc5Q91W90 417 aa18.15■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 28.8 ms