RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 WaplQ65Z40 1200 aaKnown RBP7.96□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Dnaaf4Q8R368 420 aa7.96□□□□□ -1.13
Bdnf-201ENSMUST00000053317 1700018B08RikQ9DA83 213 aa7.96□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Myo5bP21271 1818 aa7.96□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Irf6P97431 467 aa7.96□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Ppp4cP97470 307 aa7.96□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Traf3ip1Q149C2 625 aa7.96□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Q3UK37 420 aa7.96□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Dcaf15Q6PFH3 600 aa7.96□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Morc2bQ8C5W4 1022 aa7.96□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Ubac1Q8VDI7 409 aa7.96□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Gbp7Q91Z40 638 aa7.96□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Akap8Q9DBR0 687 aaKnown RBP7.96□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Utp3Q9JI13 469 aaKnown RBP7.96□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Ank1Q02357 1862 aa7.96□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Usp34Q6ZQ93 3582 aa7.96□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Cspp1B2RX88 1205 aa7.96□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Cd3dP04235 173 aa7.96□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Srrm1Q52KI8 946 aaKnown RBP7.96□□□□□ -1.14
Bdnf-201ENSMUST00000053317 VwdeQ6DFV8 926 aa7.96□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Inpp5bQ8K337 993 aa7.96□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Kiaa1024Q8K3V7 917 aa7.96□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Ero1bQ8R2E9 467 aa7.96□□□□□ -1.14
Bdnf-201ENSMUST00000053317 A0A1W2P6Q8 802 aa7.95□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Gm9048A0A1W2P7H4 802 aa7.95□□□□□ -1.14
Bdnf-201ENSMUST00000053317 A0A1W2P7Z8 802 aa7.95□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Gm9046A0A1W2P855 802 aa7.95□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Btn2a2A4QPC6 514 aa7.95□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Ttll1Q91V51 423 aa7.95□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Krt82Q99M74 516 aa7.95□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Znfx1Q8R151 1909 aaKnown RBP7.95□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Col22a1E9Q7P1 1613 aa7.95□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Anapc15-psA0A140T8L6 141 aa7.95□□□□□ -1.14
Bdnf-201ENSMUST00000053317 TxnP10639 105 aaKnown RBP7.95□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Olfm4Q3UZZ4 505 aa7.95□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Ccdc84Q4VA36 332 aaKnown RBP7.95□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Ints3Q7TPD0 1041 aaKnown RBP7.95□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Rtp1Q8C8C1 263 aa7.95□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Plch1Q4KWH5 1682 aa7.95□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Disp2Q8CIP5 1345 aa7.95□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Hoxa7P02830 229 aa7.95□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Sirt2Q8VDQ8 389 aa7.95□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Cep89Q9CZX2 791 aa7.95□□□□□ -1.14
Bdnf-201ENSMUST00000053317 CtshP49935 333 aa7.95□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Anp32eP97822 260 aaKnown RBP7.95□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Brd2Q7JJ13 798 aaKnown RBP7.95□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Tnpo1Q8BFY9 898 aaKnown RBP7.95□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Arhgef6Q8K4I3 771 aa7.95□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Dppa3Q8QZY3 150 aa7.95□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Smc3Q9CW03 1217 aaKnown RBP7.95□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Tph1P17532 447 aa7.94□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Ttbk2Q3UVR3 1243 aa7.94□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Drc7Q6V3W6 876 aa7.94□□□□□ -1.14
Bdnf-201ENSMUST00000053317 MlphQ91V27 590 aa7.94□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Azi2Q9QYP6 405 aa7.94□□□□□ -1.14
Bdnf-201ENSMUST00000053317 WasP70315 520 aa7.94□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Rbm46P86049 533 aa7.94□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Tmprss11eQ5S248 423 aa7.94□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Senp5Q6NXL6 749 aa7.94□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Tsr2Q8C8T8 191 aa7.94□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Pus7lQ8CE46 702 aa7.94□□□□□ -1.14
Bdnf-201ENSMUST00000053317 KinQ8K339 391 aa7.94□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Gpsm2Q8VDU0 679 aa7.94□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Nxf1Q99JX7 618 aaKnown RBP7.94□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Togaram1Q6A070 1776 aaKnown RBP7.94□□□□□ -1.14
Bdnf-201ENSMUST00000053317 MthfslL7N466 203 aa7.94□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Esyt2Q3TZZ7 845 aa7.94□□□□□ -1.14
Bdnf-201ENSMUST00000053317 ZyxQ62523 564 aa7.94□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Ces5aQ6AW46 575 aa7.94□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Polr3gQ6NXY9 223 aa7.94□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Calhm4Q8CE93 315 aa7.94□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Gimap7Q8R379 293 aa7.94□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Rufy2Q8R4C2 606 aa7.94□□□□□ -1.14
Bdnf-201ENSMUST00000053317 IrgqQ8VIM9 583 aa7.94□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Pcdhb22Q91XZ8 794 aa7.94□□□□□ -1.14
Bdnf-201ENSMUST00000053317 C4bP01029 1738 aa7.94□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Gm42715A0A087WP63 3095 aaKnown RBP7.93□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Smarce1O54941 411 aaKnown RBP7.93□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Kif3aP28741 701 aa7.93□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Eps15P42567 897 aa7.93□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Sema3eP70275 775 aa7.93□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Ms4a5Q810P8 197 aa7.93□□□□□ -1.14
Bdnf-201ENSMUST00000053317 CerkQ8K4Q7 531 aa7.93□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Mical1Q8VDP3 1048 aa7.93□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Bco2Q99NF1 532 aa7.93□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Tmem47Q9JJG6 181 aa7.93□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Mad1l1Q9WTX8 717 aaKnown RBP7.93□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Usp42B2RQC2 1324 aaKnown RBP7.93□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Lama4P97927 1816 aa7.93□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Frmd7A2AD83 703 aa7.93□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Cpb1B2RS76 415 aa7.93□□□□□ -1.14
Bdnf-201ENSMUST00000053317 SobpQ0P5V2 864 aa7.93□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Gxylt1Q3UHH8 404 aa7.93□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Gm10392Q3V3I3 114 aa7.93□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Cdca8Q8BHX3 289 aa7.93□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Riox2Q8CD15 465 aa7.93□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Serpinb13Q8CDC0 389 aa7.93□□□□□ -1.14
Bdnf-201ENSMUST00000053317 BbxQ8VBW5 907 aa7.93□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Prkag2Q91WG5 566 aa7.93□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Fsip1Q9D3V5 435 aa7.93□□□□□ -1.14
Retrieved 100 of 22,080 RNA–protein pairs in 37 ms