RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 GabrdP22933 449 aa11.08□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Gjc1P28229 396 aa11.08□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Vars2Q3U2A8 1060 aa11.08□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Gm9992B2RWK3 458 aa11.07□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Sema6bO54951 886 aa11.07□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Gm5935Q497S0 212 aa11.07□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Tom1l2Q5SRX1 507 aa11.07□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Spata24Q6P926 205 aa11.07□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Unc93aQ710D3 458 aa11.07□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Tab2Q99K90 693 aa11.07□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Hps4Q99KG7 671 aa11.07□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Gtf2iQ9ESZ8 998 aaKnown RBP11.07□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Mx2Q9WVP9 655 aa11.07□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Msh6P54276 1358 aaKnown RBP11.07□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Rpl13P47963 211 aaKnown RBP11.07□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Ublcp1Q8BGR9 318 aa11.07□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Card14Q99KF0 999 aa11.07□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Sar1bQ9CQC9 198 aa11.07□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Rsrc1Q9DBU6 334 aa11.07□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Lztfl1Q9JHQ5 299 aa11.07□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Add3Q9QYB5 706 aaKnown RBP11.07□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Zfpm1O35615 995 aa11.07□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Krt18P05784 423 aa11.07□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Myl3P09542 204 aa11.07□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Bach1P97302 739 aa11.07□□□□□ -0.64
Ldlr-201ENSMUST00000034713 WaslQ91YD9 501 aa11.07□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Atp6v0a4Q920R6 833 aa11.07□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Stag1Q9D3E6 1258 aa11.07□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Ccdc105Q9D4K7 499 aa11.07□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Gja10Q9WUS4 505 aa11.07□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Epb41l3Q9WV92 929 aa11.07□□□□□ -0.64
Ldlr-201ENSMUST00000034713 DesP31001 469 aaKnown RBP11.07□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Tcerg1lQ3B807 590 aa11.07□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Csrnp2Q8BGQ2 534 aa11.07□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Traf3ip3Q8C0G2 513 aa11.07□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Q9D5Q8 446 aa11.07□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Prr16A3KMN5 304 aa11.06□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Atp2b1G5E829 1220 aa11.06□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Ctnna2Q61301 953 aa11.06□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Znf428Q8C1M2 176 aa11.06□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Dctpp1Q9QY93 170 aa11.06□□□□□ -0.64
Ldlr-201ENSMUST00000034713 MetP16056 1379 aa11.06□□□□□ -0.64
Ldlr-201ENSMUST00000034713 C3P01027 1663 aa11.06□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Ccpg1Q640L3 753 aa11.06□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Krit1Q6S5J6 736 aa11.06□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Mis12Q9CY25 206 aa11.06□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Ccdc89Q9DA73 370 aa11.06□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Gbp2Q9Z0E6 589 aa11.06□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Gm13023A2A8N2 498 aa11.06□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Gm20425E9Q035 978 aaKnown RBP11.06□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Aimp1P31230 310 aaKnown RBP11.06□□□□□ -0.64
Ldlr-201ENSMUST00000034713 SrprbP47758 269 aa11.06□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Tsr1Q5SWD9 803 aa11.06□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Zfp91Q62511 572 aa11.06□□□□□ -0.64
Ldlr-201ENSMUST00000034713 KaznQ69ZS8 779 aa11.06□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Panx2Q6IMP4 677 aa11.06□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Arhgef18Q6P9R4 1021 aa11.06□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Cdc23Q8BGZ4 597 aa11.06□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Rbm42Q91V81 474 aaKnown RBP11.06□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Rbm43Q99J64 343 aa11.06□□□□□ -0.64
Ldlr-201ENSMUST00000034713 SyncQ9EPM5 470 aa11.06□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Gucy1a3Q9ERL9 691 aa11.06□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Foxp1P58462 705 aa11.05□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Kiaa1211Q5PR69 1207 aa11.05□□□□□ -0.64
Ldlr-201ENSMUST00000034713 GlmnQ8BZM1 596 aa11.05□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Cd209bQ8CJ91 325 aa11.05□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Tmx1Q8VBT0 278 aa11.05□□□□□ -0.64
Ldlr-201ENSMUST00000034713 SncbQ91ZZ3 133 aa11.05□□□□□ -0.64
Ldlr-201ENSMUST00000034713 PdiltQ9DAN1 588 aa11.05□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Gpr161B2RPY5 545 aa11.05□□□□□ -0.64
Ldlr-201ENSMUST00000034713 VimP20152 466 aaKnown RBP11.05□□□□□ -0.64
Ldlr-201ENSMUST00000034713 MycbpapQ5SUV2 932 aa11.05□□□□□ -0.64
Ldlr-201ENSMUST00000034713 P4ha1Q60715 534 aa11.05□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Q8C6G1 249 aa11.05□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Plagl1Q9JLQ4 704 aa11.05□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Kif1aP33173 1695 aa11.05□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Actn3O88990 900 aaKnown RBP11.05□□□□□ -0.64
Ldlr-201ENSMUST00000034713 LdhaP06151 332 aaKnown RBP11.05□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Stat5bP42232 786 aa11.05□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Sox13Q04891 613 aa11.05□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Nxf2Q4ZGD8 691 aa11.05□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Mcm7Q61881 719 aaKnown RBP11.05□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Hook2Q7TMK6 716 aa11.05□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Creld2Q9CYA0 350 aa11.05□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Psma7Q9Z2U0 248 aa11.05□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Znf667Q2TL60 609 aa11.05□□□□□ -0.64
Ldlr-201ENSMUST00000034713 VrtnQ3SYK4 740 aa11.05□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Znf697Q569E7 569 aa11.05□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Slc38a10Q5I012 1090 aa11.05□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Spa17Q62252 149 aa11.05□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Krt7Q9DCV7 457 aa11.05□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Rad23aP54726 363 aa11.04□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Atp8b1Q148W0 1251 aa11.04□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Brd2Q7JJ13 798 aaKnown RBP11.04□□□□□ -0.64
Ldlr-201ENSMUST00000034713 PaoxQ8C0L6 504 aa11.04□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Lrrd1Q8C0R9 853 aa11.04□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Matr3Q8K310 846 aaKnown RBP11.04□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Armc3A2AU72 881 aa11.04□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Samsn1P57725 372 aa11.04□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Hspd1P63038 573 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms