RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 Uggt2E9Q4X2 1504 aa20.5■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Gna15P30678 374 aa20.5■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Ccdc174Q3U155 467 aa20.5■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Armcx3Q8BHS6 379 aa20.5■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Gbp7Q91Z40 638 aa20.5■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Txnrd1Q9JMH6 613 aa20.5■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Plcb3P51432 1234 aaKnown RBP20.5■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Zbtb38Q3LR78 1197 aa20.5■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Mtus1Q5HZI1 1210 aa20.5■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Foxo3Q9WVH4 672 aa20.5■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Glg1Q61543 1175 aaKnown RBP20.49■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Gsta4P24472 222 aa20.49■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Lins1Q3U1D0 764 aa20.49■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Nucks1Q80XU3 234 aaKnown RBP20.49■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Trerf1Q8BXJ2 1205 aa20.49■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Ttll7A4Q9F0 912 aa20.49■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Ercc5P35689 1170 aa20.49■□□□□ 0.87
Ebf3-201ENSMUST00000033378 TfrcQ62351 763 aaKnown RBP20.49■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Gigyf2Q6Y7W8 1291 aaKnown RBP20.48■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Spag7Q7TNE3 227 aaKnown RBP20.48■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Sdccag8Q80UF4 717 aa20.48■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Enox2Q8R0Z2 598 aa20.48■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Kdm6aO70546 1401 aa20.48■□□□□ 0.87
Ebf3-201ENSMUST00000033378 FancaQ9JL70 1439 aa20.48■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Trove2O08848 538 aa20.48■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Rnf40Q3U319 1001 aa20.48■□□□□ 0.87
Ebf3-201ENSMUST00000033378 CutaQ9CQ89 177 aa20.48■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Mei1Q9D4I2 1268 aa20.48■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Sept6Q9R1T4 434 aa20.48■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Adamts12Q811B3 1600 aa20.48■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Asap2Q7SIG6 958 aa20.48■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Cplx3Q8R1B5 158 aa20.48■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Osbpl1aQ91XL9 950 aa20.48■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Nap1l4Q78ZA7 375 aaKnown RBP20.47■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Gimap5Q8BWF2 308 aa20.47■□□□□ 0.87
Ebf3-201ENSMUST00000033378 HgsQ99LI8 775 aa20.47■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Cfap65Q3V0B4 1847 aa20.47■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Atp6v0a2P15920 856 aa20.47■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Plbd2Q3TCN2 594 aa20.47■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Ddb1Q3U1J4 1140 aaKnown RBP20.47■□□□□ 0.87
Ebf3-201ENSMUST00000033378 C87499Q3UX49 493 aa20.47■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Oxr1Q4KMM3 866 aa20.47■□□□□ 0.87
Ebf3-201ENSMUST00000033378 LgsnQ8CIX8 563 aa20.47■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Nup58Q8R332 587 aa20.47■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Pold4Q9CWP8 107 aa20.47■□□□□ 0.87
Ebf3-201ENSMUST00000033378 A0A1W2P6Q8 802 aa20.47■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Gm9048A0A1W2P7H4 802 aa20.47■□□□□ 0.87
Ebf3-201ENSMUST00000033378 A0A1W2P7Z8 802 aa20.47■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Gm9046A0A1W2P855 802 aa20.47■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Ap1b1O35643 943 aaKnown RBP20.47■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Ms4a2P20490 235 aa20.47■□□□□ 0.87
Ebf3-201ENSMUST00000033378 RilpQ5ND29 369 aa20.47■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Mis12Q9CY25 206 aa20.47■□□□□ 0.87
Ebf3-201ENSMUST00000033378 PigbQ9JJQ0 542 aa20.47■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Cacna2d3Q9Z1L5 1091 aa20.47■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Apol7aB2RT54 418 aa20.46■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Akr1b8P45377 316 aa20.46■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Enox1Q8BHR2 643 aaKnown RBP20.46■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Becn2P0DM65 447 aa20.46■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Taok1Q5F2E8 1001 aa20.46■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Fkbp3Q62446 224 aaKnown RBP20.46■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Pcdhb5Q91XZ5 792 aa20.46■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Psmc2P46471 433 aa20.46■□□□□ 0.87
Ebf3-201ENSMUST00000033378 PcQ05920 1178 aa20.46■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Tsr1Q5SWD9 803 aa20.46■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Wdr44Q6NVE8 915 aa20.46■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Rsad2Q8CBB9 362 aa20.46■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Tekt2Q922G7 430 aa20.46■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Dph5Q9CWQ0 281 aa20.46■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Ak9G3UYQ4 1894 aa20.46■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Clasp1Q80TV8 1535 aaKnown RBP20.46■□□□□ 0.87
Ebf3-201ENSMUST00000033378 AdkP55264 361 aa20.46■□□□□ 0.87
Ebf3-201ENSMUST00000033378 NntQ61941 1086 aaKnown RBP20.46■□□□□ 0.87
Ebf3-201ENSMUST00000033378 VmacQ8BP01 174 aa20.46■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Caps2Q8BUG5 550 aa20.46■□□□□ 0.87
Ebf3-201ENSMUST00000033378 St5Q924W7 1134 aa20.46■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Ppp1r12cQ3UMT1 782 aa20.45■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Galnt15Q9D2N8 638 aa20.45■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Vstm4T1NXB5 319 aa20.45■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Gm5580A0A0N4SVP8 411 aa20.45■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Stmn2P55821 179 aa20.45■□□□□ 0.86
Ebf3-201ENSMUST00000033378 SarnpQ9D1J3 210 aaKnown RBP20.45■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Serpinb12Q9D7P9 423 aa20.45■□□□□ 0.86
Ebf3-201ENSMUST00000033378 MycbpQ9EQS3 103 aa20.45■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Pcdhb9E9Q5G2 828 aa20.45■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Krt18P05784 423 aa20.45■□□□□ 0.86
Ebf3-201ENSMUST00000033378 LtkP08923 888 aa20.45■□□□□ 0.86
Ebf3-201ENSMUST00000033378 VrtnQ3SYK4 740 aa20.45■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Epn1Q80VP1 575 aa20.45■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Scaf1Q5U4C3 1256 aaKnown RBP20.44■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Klhl34A2AI76 644 aa20.44■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Kif22Q3V300 660 aa20.44■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Serpinb1cQ5SV42 375 aa20.44■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Pabpn1lQ5XFR0 273 aa20.44■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Trim56Q80VI1 734 aaKnown RBP20.44■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Dnajc17Q91WT4 303 aa20.44■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Plekhg1F6S200 1446 aa20.44■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Myo3aQ8K3H5 1613 aa20.44■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Hspa2P17156 633 aa20.44■□□□□ 0.86
Ebf3-201ENSMUST00000033378 Trip13Q3UA06 432 aa20.44■□□□□ 0.86
Retrieved 100 of 22,080 RNA–protein pairs in 41.4 ms