RNA–Protein interactions for RNA: ENSMUST00000033012.8

Copb1-201, Transcript of Coatomer subunit beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Copb1, Length 3,346 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1-201ENSMUST00000033012 Arhgap44Q5SSM3 814 aa11.24□□□□□ -0.61
Copb1-201ENSMUST00000033012 Prpf4bQ61136 1007 aaKnown RBP11.24□□□□□ -0.61
Copb1-201ENSMUST00000033012 Phc1Q64028 1012 aa11.24□□□□□ -0.61
Copb1-201ENSMUST00000033012 Dnajc8Q6NZB0 253 aaKnown RBP11.24□□□□□ -0.61
Copb1-201ENSMUST00000033012 Ahcyl1Q80SW1 530 aa11.24□□□□□ -0.61
Copb1-201ENSMUST00000033012 Nop9Q8BMC4 636 aaKnown RBP11.24□□□□□ -0.61
Copb1-201ENSMUST00000033012 Mphosph6Q9D1Q1 161 aa11.24□□□□□ -0.61
Copb1-201ENSMUST00000033012 Kcnh3Q9WVJ0 1095 aa11.24□□□□□ -0.61
Copb1-201ENSMUST00000033012 Nwd1A6H603 1563 aa11.24□□□□□ -0.61
Copb1-201ENSMUST00000033012 Znf335A2A5K6 1337 aa11.24□□□□□ -0.61
Copb1-201ENSMUST00000033012 CflarO35732 481 aa11.24□□□□□ -0.61
Copb1-201ENSMUST00000033012 Prl7a2O54831 253 aa11.24□□□□□ -0.61
Copb1-201ENSMUST00000033012 Skap1Q3UUV5 355 aa11.24□□□□□ -0.61
Copb1-201ENSMUST00000033012 Tab3Q571K4 716 aa11.24□□□□□ -0.61
Copb1-201ENSMUST00000033012 Lin7aQ8JZS0 233 aa11.24□□□□□ -0.61
Copb1-201ENSMUST00000033012 Pcdha7Q91Y13 937 aa11.24□□□□□ -0.61
Copb1-201ENSMUST00000033012 Dhx58Q99J87 678 aa11.24□□□□□ -0.61
Copb1-201ENSMUST00000033012 Cul5Q9D5V5 780 aa11.24□□□□□ -0.61
Copb1-201ENSMUST00000033012 Parp14Q2EMV9 1817 aa11.24□□□□□ -0.61
Copb1-201ENSMUST00000033012 Myo1eE9Q634 1107 aa11.24□□□□□ -0.61
Copb1-201ENSMUST00000033012 Opa1P58281 960 aa11.24□□□□□ -0.61
Copb1-201ENSMUST00000033012 Klrb1Q0ZUP1 214 aa11.24□□□□□ -0.61
Copb1-201ENSMUST00000033012 Xlr3bQ6P205 226 aa11.24□□□□□ -0.61
Copb1-201ENSMUST00000033012 Sec62Q8BU14 398 aaKnown RBP11.24□□□□□ -0.61
Copb1-201ENSMUST00000033012 Erich5Q8K0S2 362 aa11.24□□□□□ -0.61
Copb1-201ENSMUST00000033012 Edc3Q8K2D3 508 aaKnown RBP11.24□□□□□ -0.61
Copb1-201ENSMUST00000033012 Ccdc65Q8VHI7 493 aa11.24□□□□□ -0.61
Copb1-201ENSMUST00000033012 Ranbp17Q99NF8 1088 aa11.24□□□□□ -0.61
Copb1-201ENSMUST00000033012 Rabgef1Q9JM13 491 aa11.24□□□□□ -0.61
Copb1-201ENSMUST00000033012 Uso1Q9Z1Z0 959 aaKnown RBP11.24□□□□□ -0.61
Copb1-201ENSMUST00000033012 Dlg5E9Q9R9 1921 aa11.23□□□□□ -0.61
Copb1-201ENSMUST00000033012 Znf536Q8K083 1302 aa11.23□□□□□ -0.61
Copb1-201ENSMUST00000033012 Gm28510A0A087WP28 240 aa11.23□□□□□ -0.61
Copb1-201ENSMUST00000033012 Scgb2b18A0A087WPA9 112 aa11.23□□□□□ -0.61
Copb1-201ENSMUST00000033012 Zfand4D3Z3C6 739 aa11.23□□□□□ -0.61
Copb1-201ENSMUST00000033012 Birc5O70201 140 aa11.23□□□□□ -0.61
Copb1-201ENSMUST00000033012 Epb41l2O70318 988 aaKnown RBP11.23□□□□□ -0.61
Copb1-201ENSMUST00000033012 Tmprss11aQ3UQ41 389 aa11.23□□□□□ -0.61
Copb1-201ENSMUST00000033012 Shq1Q7TMX5 569 aa11.23□□□□□ -0.61
Copb1-201ENSMUST00000033012 Ncaph2Q8BSP2 607 aa11.23□□□□□ -0.61
Copb1-201ENSMUST00000033012 Myh7bA2AQP0 1941 aa11.23□□□□□ -0.61
Copb1-201ENSMUST00000033012 Slfn8B1ARD8 910 aa11.23□□□□□ -0.61
Copb1-201ENSMUST00000033012 Gm1979E9QAN3 267 aa11.23□□□□□ -0.61
Copb1-201ENSMUST00000033012 Nr1d1Q3UV55 615 aa11.23□□□□□ -0.61
Copb1-201ENSMUST00000033012 Cyp2d12Q8BVD2 504 aa11.23□□□□□ -0.61
Copb1-201ENSMUST00000033012 Dtnbp1Q91WZ8 352 aa11.23□□□□□ -0.61
Copb1-201ENSMUST00000033012 1700109H08RikQ9D9C0 210 aa11.23□□□□□ -0.61
Copb1-201ENSMUST00000033012 Adam1aQ60813 791 aa11.22□□□□□ -0.61
Copb1-201ENSMUST00000033012 Ezh2Q61188 746 aaKnown RBP11.22□□□□□ -0.61
Copb1-201ENSMUST00000033012 Ehbp1Q69ZW3 1231 aa11.22□□□□□ -0.61
Copb1-201ENSMUST00000033012 Ppp4r3aQ6P2K6 820 aa11.22□□□□□ -0.61
Copb1-201ENSMUST00000033012 Pabpc4Q6PHQ9 660 aaKnown RBP11.22□□□□□ -0.61
Copb1-201ENSMUST00000033012 Tmem39aQ9CYC3 486 aa11.22□□□□□ -0.61
Copb1-201ENSMUST00000033012 Ctnnd1P30999 938 aaKnown RBP11.22□□□□□ -0.61
Copb1-201ENSMUST00000033012 Skap2Q3UND0 358 aa11.22□□□□□ -0.61
Copb1-201ENSMUST00000033012 Ccdc157Q5SPX1 718 aa11.22□□□□□ -0.61
Copb1-201ENSMUST00000033012 Prl2c1Q5SVL9 228 aa11.22□□□□□ -0.61
Copb1-201ENSMUST00000033012 Sema4bQ62179 823 aa11.22□□□□□ -0.61
Copb1-201ENSMUST00000033012 MtrrQ8C1A3 696 aa11.22□□□□□ -0.61
Copb1-201ENSMUST00000033012 Vps53Q8CCB4 832 aa11.22□□□□□ -0.61
Copb1-201ENSMUST00000033012 Pcdha5Q91Y15 934 aa11.22□□□□□ -0.61
Copb1-201ENSMUST00000033012 Tbc1d7Q9D0K0 293 aa11.22□□□□□ -0.61
Copb1-201ENSMUST00000033012 Fam173bQ9D1Z3 247 aa11.22□□□□□ -0.61
Copb1-201ENSMUST00000033012 Itga2bQ9QUM0 1033 aa11.22□□□□□ -0.61
Copb1-201ENSMUST00000033012 Astn2Q80Z10 1352 aa11.22□□□□□ -0.61
Copb1-201ENSMUST00000033012 Ptpn23Q6PB44 1692 aa11.22□□□□□ -0.61
Copb1-201ENSMUST00000033012 Scgb2b7D3YYY1 112 aa11.22□□□□□ -0.61
Copb1-201ENSMUST00000033012 Tpp1O89023 562 aa11.22□□□□□ -0.61
Copb1-201ENSMUST00000033012 Sstr3P30935 428 aa11.22□□□□□ -0.61
Copb1-201ENSMUST00000033012 Trim80Q3V061 624 aa11.22□□□□□ -0.61
Copb1-201ENSMUST00000033012 Zic5Q7TQ40 622 aa11.22□□□□□ -0.61
Copb1-201ENSMUST00000033012 Haus7Q8BKT8 364 aa11.22□□□□□ -0.61
Copb1-201ENSMUST00000033012 Atad2Q8CDM1 1040 aa11.22□□□□□ -0.61
Copb1-201ENSMUST00000033012 Ccdc6D3YZP9 469 aa11.21□□□□□ -0.61
Copb1-201ENSMUST00000033012 Zscan18E9PUD6 809 aa11.21□□□□□ -0.61
Copb1-201ENSMUST00000033012 Ano9P86044 747 aa11.21□□□□□ -0.61
Copb1-201ENSMUST00000033012 Trmt1Q3TX08 663 aa11.21□□□□□ -0.61
Copb1-201ENSMUST00000033012 Mea1Q64327 174 aa11.21□□□□□ -0.61
Copb1-201ENSMUST00000033012 Spag7Q7TNE3 227 aaKnown RBP11.21□□□□□ -0.61
Copb1-201ENSMUST00000033012 Stkld1Q80YS9 662 aa11.21□□□□□ -0.61
Copb1-201ENSMUST00000033012 Rassf8Q8CJ96 419 aa11.21□□□□□ -0.61
Copb1-201ENSMUST00000033012 NptxrQ99J85 493 aa11.21□□□□□ -0.61
Copb1-201ENSMUST00000033012 Pes1Q9EQ61 584 aaKnown RBP11.21□□□□□ -0.61
Copb1-201ENSMUST00000033012 Micall1Q8BGT6 870 aa11.21□□□□□ -0.62
Copb1-201ENSMUST00000033012 Tango6Q8C3S2 1079 aa11.21□□□□□ -0.62
Copb1-201ENSMUST00000033012 Ccdc150Q8CDI7 1110 aa11.21□□□□□ -0.62
Copb1-201ENSMUST00000033012 Atp6v0a4Q920R6 833 aa11.21□□□□□ -0.62
Copb1-201ENSMUST00000033012 EpgnQ924X1 152 aa11.21□□□□□ -0.62
Copb1-201ENSMUST00000033012 Odf2A3KGV1 830 aaKnown RBP11.2□□□□□ -0.62
Copb1-201ENSMUST00000033012 Cyp2d34L7N463 504 aa11.2□□□□□ -0.62
Copb1-201ENSMUST00000033012 MybP06876 636 aa11.2□□□□□ -0.62
Copb1-201ENSMUST00000033012 Gigyf2Q6Y7W8 1291 aaKnown RBP11.2□□□□□ -0.62
Copb1-201ENSMUST00000033012 Sval3Q76I99 144 aa11.2□□□□□ -0.62
Copb1-201ENSMUST00000033012 Rasal3Q8C2K5 1041 aa11.2□□□□□ -0.62
Copb1-201ENSMUST00000033012 Mb21d2Q8C525 428 aa11.2□□□□□ -0.62
Copb1-201ENSMUST00000033012 OplahQ8K010 1288 aa11.2□□□□□ -0.62
Copb1-201ENSMUST00000033012 Prrc2bQ7TPM1 1486 aaKnown RBP11.2□□□□□ -0.62
Copb1-201ENSMUST00000033012 Ric1Q69ZJ7 1422 aa11.2□□□□□ -0.62
Copb1-201ENSMUST00000033012 Kif23E9Q5G3 953 aa11.2□□□□□ -0.62
Copb1-201ENSMUST00000033012 PnnO35691 725 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms