RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Mum1l1Q4VA55 681 aa20.91■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 CluhQ5SW19 1315 aa20.91■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Sval3Q76I99 144 aa20.91■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Cep128Q8BI22 1102 aa20.91■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Mtfr1lQ9CWE0 289 aa20.91■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Lonp2Q9DBN5 852 aa20.91■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Ugt1a8D3Z748 530 aa20.9■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Ugt1a10E9PXN7 530 aa20.9■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Gucy2cQ3UWA6 1072 aa20.9■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Mars2Q499X9 586 aaKnown RBP20.9■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Triml1Q8BVP1 470 aa20.9■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Tcp11l2Q8K1H7 517 aa20.9■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Mis18aQ9CZJ6 204 aa20.9■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Krtap5-3Q9D226 196 aa20.9■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Ercc4Q9QZD4 917 aa20.9■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Dhx8A2A4P0 1244 aaKnown RBP20.9■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Ube4aE9Q735 1028 aa20.9■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Usp53P15975 1069 aa20.9■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Pola2P33611 600 aa20.9■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Traf1P39428 409 aa20.9■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Slc7a3P70423 618 aa20.9■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Adam6bQ6IMH7 756 aa20.9■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Drc7Q6V3W6 876 aa20.9■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Epha10Q8BYG9 1007 aa20.9■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Pcdha7Q91Y13 937 aa20.9■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Ccdc88aQ5SNZ0 1873 aa20.9■□□□□ 0.94
Ccdc3-201ENSMUST00000027988 Scgb2b18A0A087WPA9 112 aa20.89■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Tuft1O08970 390 aa20.89■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Ptpn12P35831 775 aa20.89■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 SowahdQ8BY98 327 aa20.89■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 E2f4Q8R0K9 410 aa20.89■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Myo1hQ9D6A1 958 aa20.89■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Eif4enif1Q9EST3 983 aaKnown RBP20.89■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Itga2bQ9QUM0 1033 aa20.89■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Adgra3Q7TT36 1310 aa20.88■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Tpm3-rs7D3Z2H9 248 aa20.88■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Ppp1r21Q3TDD9 780 aa20.88■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Adck2Q6NSR3 617 aa20.88■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Setdb2Q8C267 713 aa20.88■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Ccdc12Q8R344 166 aaKnown RBP20.88■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Peak1Q69Z38 1735 aa20.88■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Plch1Q4KWH5 1682 aa20.88■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Izumo3A6PWV3 263 aa20.88■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Zfand4D3Z3C6 739 aa20.88■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Cdh15P33146 784 aa20.88■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Cfap69Q8BH53 942 aa20.88■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Col20a1Q923P0 1320 aa20.87■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Uap1Q91YN5 522 aa20.87■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 SelenooQ9DBC0 667 aa20.87■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Rsrc2A2RTL5 376 aaKnown RBP20.87■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Gm5134E9QAB5 671 aa20.87■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Ccdc191J3QQ27 883 aa20.87■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Aak1Q3UHJ0 959 aa20.87■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Kif1bpQ6ZPU9 617 aa20.87■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Dnph1Q80VJ3 173 aa20.87■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Iqcb1Q8BP00 598 aa20.87■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Hexim1Q8R409 356 aaKnown RBP20.87■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Ginm1Q91WR6 327 aa20.87■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Mfap3Q922T2 349 aa20.87■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Tktl2Q9D4D4 627 aa20.87■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Tubb4aQ9D6F9 444 aa20.87■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Stx8O88983 236 aa20.86■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Rtel1Q0VGM9 1203 aa20.86■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Ddb1Q3U1J4 1140 aaKnown RBP20.86■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Ces3aQ63880 571 aa20.86■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Ces3bQ8VCU1 571 aa20.86■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Klc3Q91W40 508 aa20.86■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Ttc14Q9CSP9 761 aa20.86■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Bcl2l12Q9D3J3 255 aa20.86■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Znf609Q8BZ47 1413 aa20.86■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Ppef2O35385 757 aa20.86■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Tmem60Q8K174 133 aa20.86■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Dbndd1Q9CZ00 160 aa20.86■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 A0A0U1RNP2 1173 aa20.85■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Prl7d1P04769 244 aa20.85■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Apol10aQ8CCA5 318 aa20.85■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Psrc1Q9D0P7 329 aa20.85■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Mfap3lQ9D3X9 409 aa20.85■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 A0A1W2P6Q8 802 aa20.85■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Gm9048A0A1W2P7H4 802 aa20.85■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 A0A1W2P7S8 802 aa20.85■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 A0A1W2P7Z8 802 aa20.85■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Gm9046A0A1W2P855 802 aa20.85■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 4932429P05RikA2ADI4 785 aa20.85■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Stag2O35638 1231 aa20.85■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 MarcksP26645 309 aaKnown RBP20.85■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Rtkn2Q14B46 604 aa20.85■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Cdc5lQ6A068 802 aaKnown RBP20.85■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 HlfQ8BW74 295 aa20.85■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 NsmfQ99NF2 532 aa20.85■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Scrn1Q9CZC8 414 aa20.85■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Eif2ak3Q9Z2B5 1114 aa20.85■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Letm1Q9Z2I0 738 aa20.85■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Hspa4Q61316 841 aa20.84■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Pcdha12Q91Y18 950 aa20.84■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Gpaa1Q9WTK3 621 aa20.84■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Rad23bP54728 416 aa20.84■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Ehmt1Q5DW34 1296 aa20.84■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 RragbQ6NTA4 374 aa20.84■□□□□ 0.93
Ccdc3-201ENSMUST00000027988 Nup133Q8R0G9 1155 aa20.84■□□□□ 0.93
Retrieved 100 of 22,080 RNA–protein pairs in 28.4 ms