RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Mns1Q61884 491 aa17.11■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Ccp110Q7TSH4 1004 aa17.11■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Ttll4Q80UG8 1193 aa17.11■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Taf6lQ8R2K4 616 aa17.11■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Desi2Q9D291 194 aa17.11■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Adgra3Q7TT36 1310 aa17.11■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Mum1l1Q4VA55 681 aa17.1■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Trim25Q61510 634 aaKnown RBP17.1■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 BaatQ91X34 420 aa17.1■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Fam76aQ922G2 307 aa17.1■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Lonrf3Q9D4H7 753 aa17.1■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 ChmQ9QXG2 665 aa17.1■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Spag5Q7TME2 1165 aa17.1■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 RadxQ8C779 850 aa17.1■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Tktl2Q9D4D4 627 aa17.1■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Cul4bA2A432 970 aaKnown RBP17.1■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Ccdc191J3QQ27 883 aa17.1■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Nab2Q61127 525 aa17.1■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Srp68Q8BMA6 625 aaKnown RBP17.1■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 HlfQ8BW74 295 aa17.1■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Sde2Q8K1J5 448 aaKnown RBP17.1■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Gimap7Q8R379 293 aa17.1■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Dpf1Q9QX66 387 aa17.1■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 CluhQ5SW19 1315 aa17.09■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Snapc4Q8BP86 1333 aa17.09■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Gng11P61953 73 aa17.09■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Tmtc2Q56A06 836 aa17.09■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Znf532Q6NXK2 1036 aa17.09■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Sval3Q76I99 144 aa17.09■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Myo1hQ9D6A1 958 aa17.09■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Calml3Q9D6P8 149 aa17.09■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Gpaa1Q9WTK3 621 aa17.09■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Gm36210A0A1B0GS00 229 aa17.09■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Gucy1a2F8VQK3 730 aa17.09■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Api5O35841 504 aaKnown RBP17.09■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Ric8aQ3TIR3 530 aa17.09■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Gm5592Q3V0A6 857 aa17.09■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Mars2Q499X9 586 aaKnown RBP17.09■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Trim29Q8R2Q0 587 aa17.09■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Rbm19Q8R3C6 952 aaKnown RBP17.09■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Bcl11bQ99PV8 884 aa17.09■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Thap2Q9D305 217 aa17.09■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 SelenooQ9DBC0 667 aa17.09■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 A0A0U1RNP2 1173 aa17.08■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Il15P48346 162 aa17.08■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Lrrc43Q3V0L5 667 aa17.08■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Cd209bQ8CJ91 325 aa17.08■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Pla2g12bQ99P27 195 aa17.08■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Znf638Q61464 1960 aaKnown RBP17.08■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Usp53P15975 1069 aa17.08■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 H2afxP27661 143 aaKnown RBP17.08■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Sox5P35710 763 aa17.08■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Lamb3Q61087 1168 aa17.08■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Brms1Q99N20 246 aa17.08■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Sgpp1Q9JI99 430 aa17.08■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Pnpla6Q3TRM4 1355 aa17.08■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Adck5Q80V03 582 aa17.08■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Slc14a2Q8R4T9 930 aa17.08■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 RarsQ9D0I9 660 aaKnown RBP17.08■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Rsph10bE9PYQ0 876 aa17.07■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Ubap1lG3UW59 384 aa17.07■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Cdh15P33146 784 aa17.07■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Trak2Q6P9N8 913 aa17.07■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Eno4Q8C042 619 aa17.07■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Adarb2Q9JI20 745 aa17.07■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Chaf1aQ9QWF0 911 aa17.07■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Pfkfb3A7UAK5 555 aa17.07■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Gm7347D3YYI9 267 aa17.07■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Speer4aF8VPX6 267 aa17.07■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Ess2O70279 479 aa17.07■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Adck2Q6NSR3 617 aa17.07■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Washc1Q8VDD8 475 aa17.07■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Vstm4T1NXB5 319 aa17.07■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Map3k15A2AQW0 1331 aa17.06■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Ftl1P29391 183 aa17.06■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Mfap3Q922T2 349 aa17.06■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Cfap45Q9D9U9 551 aa17.06■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Aak1Q3UHJ0 959 aa17.06■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Cep131Q62036 1060 aa17.06■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Hdac4Q6NZM9 1076 aa17.06■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Tekt3Q6X6Z7 490 aa17.06■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Pnpla2Q8BJ56 486 aa17.06■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 E2f4Q8R0K9 410 aa17.06■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Pcdha7Q91Y13 937 aa17.06■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Col20a1Q923P0 1320 aa17.06■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 4932429P05RikA2ADI4 785 aa17.05■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 DlatQ8BMF4 642 aa17.05■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Maats1Q8BRC6 783 aa17.05■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Tbc1d2B1AVH7 922 aa17.05■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Zfp91Q62511 572 aa17.05■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Tada3Q8R0L9 432 aa17.05■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 HmcesQ8R1M0 353 aaKnown RBP17.05■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 LpxnQ99N69 386 aa17.05■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Rbbp6P97868 1790 aaKnown RBP17.05■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 RragbQ6NTA4 374 aa17.05■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Ggt6Q6PDE7 497 aa17.05■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Scrn1Q9CZC8 414 aa17.05■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Itga2bQ9QUM0 1033 aa17.05■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Duox1A2AQ92 1551 aa17.04■□□□□ 0.32
Nkx3-1-201ENSMUST00000022646 Palm3A2TJV2 734 aa17.04■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms